Dbfetch
LOCUS NM_001019690 2444 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe DNA recombination mediator Swi2 (swi2), mRNA. ACCESSION NM_001019690 VERSION NM_001019690.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 2444) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 2444) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 3 AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 4 (bases 1 to 2444) AUTHORS Trinkl,H., Lang,B.F. and Wolf,K. TITLE Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe JOURNAL Nucleic Acids Res 17 (16), 6730 (1989) PUBMED 2780299 REFERENCE 5 (bases 1 to 2444) AUTHORS Lang,B.F., Cedergren,R. and Gray,M.W. TITLE The mitochondrial genome of the fission yeast, Schizosaccharomyces pombe. Sequence of the large-subunit ribosomal RNA gene, comparison of potential secondary structure in fungal mitochondrial large-subunit rRNAs and evolutionary considerations JOURNAL Eur J Biochem 169 (3), 527-537 (1987) PUBMED 2446871 REFERENCE 6 (bases 1 to 2444) AUTHORS Lang,B.F., Ahne,F. and Bonen,L. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene JOURNAL J Mol Biol 184 (3), 353-366 (1985) PUBMED 4046021 REFERENCE 7 (bases 1 to 2444) AUTHORS Lang,B.F. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans JOURNAL EMBO J 3 (9), 2129-2136 (1984) PUBMED 6092057 REFERENCE 8 (bases 1 to 2444) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 9 AUTHORS Wood,V. and Rutherford,K. CONSRTM PomBase TITLE Direct Submission JOURNAL Submitted (13-MAR-2024) University of Cambridge, PomBase, Hopkins building, Tennis Court Rd, Cambridge, United Kingdom REFERENCE 10 AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003424). On Jun 21, 2024 this sequence version replaced NM_001019690.2. FEATURES Location/Qualifiers source 1..2444 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="I" gene 1..2444 /gene="swi2" /locus_tag="SPOM_SPAC1142.03C" /gene_synonym="SPAC17G6.20c" /db_xref="GeneID:3361456" /db_xref="PomBase:SPAC1142.03c" CDS 118..2286 /gene="swi2" /locus_tag="SPOM_SPAC1142.03C" /gene_synonym="SPAC17G6.20c" /codon_start=1 /product="DNA recombination mediator Swi2" /protein_id="NP_001018264.1" /db_xref="GeneID:3361456" /db_xref="PomBase:SPAC1142.03c" /translation="MNVNKKQESIPVNTGSESISSNDNERFEQGKGVGSNLGSHFFEP VEYYYSDGKPMNQTEASQMKGTFSRDFSLNEMNNEFITDSFFCTTTPDPKTESPSFVK YNAHCDDHPEISGHVSSNDKDFAYFEDKSENQPLVTLPNENNQVIEPLSSQSCKSQLS TQNYSESDFGWNQLCDLDPIFKSLAFTDDTNLFPAFADSEAALIMLKKREMTRVKHRA GRPRKYSYVNKDLNFEEGLPRRRGRPTGWRKYPEKEEIYPTLSPRIKKPRKVFDAVVI PVTIKPSIYTEPSLPHHIDWNNGCSEEFDFEPSREDEDFPDLTSDSTGQDPLSSEPTI FDISPLPSDMEPTFSENSLITINKMAIEERKQSRRLEQPLAESQHQEDLLNPYGVDQD FDETCINESEQQATHIPNSSIKFNYDYTPPKSATSHKHKRVDLLASRKENVWTGLYGK VQTEMVSNRGEAVLNENNSKNRTNVTKPNSYKNSVLSIGNNHSNHSNIIKPNTYKNTI LSNENNTPNYSNVCLSTSLINRSLPSLKSTMHPGVNKDLITRPFKNVNKMSVRKALIK PFHPPISKISRTRLTVSSPERLYCAKPISMATAPSETDSKLINRIRNLELEIGGLKEQ LSVVELALDTDKNSKQIQVVERKIQNWRKSAQLAVEVLFPVFSLKFTTMLQEVPQSVL RTSANDLRTKPCSIGTYLEQLQIPFHLLQYNSETESWDLE" ORIGIN 1 acaatttcca caccaaagat atgtccttaa taatcatact ccggcaaatt tattaaatgt 61 atattgcttt gaacagaatt ttgctttttg agaatcgtga gaaaccttat aggccttatg 121 aatgtgaaca aaaagcagga gtcgatacca gtaaacaccg gatctgaaag tatttcctct 181 aacgacaatg aaaggtttga gcaaggaaag ggcgtcggct caaaccttgg atcccatttc 241 tttgagccgg tagaatacta ttattctgat ggtaaaccga tgaatcaaac agaagcaagc 301 cagatgaagg gaaccttttc tagagatttt tctttaaatg aaatgaataa tgaatttatc 361 acagattctt tcttttgtac aacgactcct gatccaaaaa ctgaatctcc ctcttttgtg 421 aaatacaatg cccattgtga tgaccaccca gagattagcg gccatgtgtc ctcgaatgat 481 aaagactttg catactttga agataaatct gaaaatcaac cactggttac tcttcctaac 541 gagaataatc aggttattga accgttaagc tcacaaagtt gtaaatctca attatcaacc 601 caaaattatt cggaaagtga ttttggttgg aaccagctgt gtgatctcga tcctatattt 661 aaatctttgg cttttacaga cgatactaat ctattccctg catttgcaga ctctgaagcc 721 gcactgatta tgctgaagaa aagagaaatg acgagagtga agcatagggc aggaaggcca 781 agaaagtatt cgtatgttaa taaagatttg aacttcgagg aaggattgcc aagaagaagg 841 ggaagaccta caggctggag gaagtatcct gaaaaggagg aaatatatcc tactctgtct 901 ccaaggatta agaaaccgag aaaagttttc gatgctgtag tcattccggt taccataaaa 961 cctagtatat atacagagcc ctcgttacct catcatatcg attggaacaa tggttgttct 1021 gaggaatttg attttgagcc atcaagagag gatgaagact tccctgattt aacttctgat 1081 tctactggtc aagatccatt gtctagtgag ccgactattt ttgacatttc tccattacct 1141 agtgatatgg agccaacttt ttccgaaaat tcattaatta ccattaacaa aatggcaata 1201 gaagaacgga aacaatcacg tcgacttgag caaccactag ctgaatctca acatcaagaa 1261 gatttgttga atccctacgg tgtagatcaa gactttgatg aaacttgcat caatgagtct 1321 gaacaacaag ccacgcatat tcctaattca agtattaaat ttaactatga ttacactccc 1381 cctaagtctg ctacctccca taagcataag agggtcgatc ttctagcatc tcggaaggag 1441 aatgtttgga ctggattgta tgggaaagta caaactgaaa tggtttccaa cagaggcgaa 1501 gctgtgttga atgaaaataa tagcaaaaat cgtactaatg tcactaagcc gaattcatac 1561 aaaaacagtg ttttatcaat tgggaataat cattcaaacc attctaatat tattaaaccg 1621 aacacctata aaaatactat tttgtccaat gagaacaata ctccaaacta ttctaatgtc 1681 tgtctttcta cctctttgat aaatcgaagc cttccatctc ttaaatctac tatgcaccca 1741 ggggtcaaca aagatttaat tacgcggcca tttaagaatg ttaataaaat gtctgtacga 1801 aaggctctca ttaaaccatt tcatcctccg atttcgaaga tttcgcgaac ccgcttaact 1861 gtttcctcac ctgaacggct gtattgtgcc aagcctatct caatggctac tgctccaagt 1921 gaaacggata gcaaactaat taacagaatc cgtaaccttg aattagaaat tggtggcttg 1981 aaagaacaat tatccgttgt agagctcgct cttgacactg acaaaaattc taaacagata 2041 caggtggttg aaagaaaaat ccaaaattgg cgaaaatctg cgcaattagc agtcgaagtg 2101 ctatttcctg ttttttcttt gaagtttaca accatgcttc aagaagttcc acagtctgtt 2161 ttacgcacat cagctaatga tttacgcacc aagccatgtt ccattggtac gtaccttgaa 2221 cagttgcaaa tacccttcca tctccttcaa tataattctg agacagaaag ctgggacctg 2281 gaataatata tgtttttagt tttttctttg cttcctgtct gttgtttcta tctatttttg 2341 tttttttttg tcatatcagt attttacagt tcatgattca cattaaaggt actatagtta 2401 tctaatgtta ttttaatagc aatataatta ggaatcaaaa attc //