Dbfetch
LOCUS NM_001018543 2132 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe eIF2 alpha kinase Hri2 (hri2), mRNA. ACCESSION NM_001018543 VERSION NM_001018543.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 2132) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 2132) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 3 AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 4 (bases 1 to 2132) AUTHORS Trinkl,H., Lang,B.F. and Wolf,K. TITLE Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe JOURNAL Nucleic Acids Res 17 (16), 6730 (1989) PUBMED 2780299 REFERENCE 5 (bases 1 to 2132) AUTHORS Lang,B.F., Cedergren,R. and Gray,M.W. TITLE The mitochondrial genome of the fission yeast, Schizosaccharomyces pombe. Sequence of the large-subunit ribosomal RNA gene, comparison of potential secondary structure in fungal mitochondrial large-subunit rRNAs and evolutionary considerations JOURNAL Eur J Biochem 169 (3), 527-537 (1987) PUBMED 2446871 REFERENCE 6 (bases 1 to 2132) AUTHORS Lang,B.F., Ahne,F. and Bonen,L. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene JOURNAL J Mol Biol 184 (3), 353-366 (1985) PUBMED 4046021 REFERENCE 7 (bases 1 to 2132) AUTHORS Lang,B.F. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans JOURNAL EMBO J 3 (9), 2129-2136 (1984) PUBMED 6092057 REFERENCE 8 (bases 1 to 2132) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 9 AUTHORS Wood,V. and Rutherford,K. CONSRTM PomBase TITLE Direct Submission JOURNAL Submitted (13-MAR-2024) University of Cambridge, PomBase, Hopkins building, Tennis Court Rd, Cambridge, United Kingdom REFERENCE 10 AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003424). On Jun 21, 2024 this sequence version replaced NM_001018543.2. FEATURES Location/Qualifiers source 1..2132 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="I" gene 1..2132 /gene="hri2" /locus_tag="SPOM_SPAC222.07C" /db_xref="GeneID:2541943" /db_xref="PomBase:SPAC222.07c" CDS 137..2056 /gene="hri2" /locus_tag="SPOM_SPAC222.07C" /codon_start=1 /product="eIF2 alpha kinase Hri2" /protein_id="NP_593146.1" /db_xref="GeneID:2541943" /db_xref="PomBase:SPAC222.07c" /translation="MRFFNAHKSAEDGNYSETTNAISLKNERQSRDLSVNKHGRMLLT ALLENFCQLYDNNPAKSKRLFALICHTLQKIGILEEEYIEELAAVRSNYQDALHHLIL QAREAIRLDDAEERLLALPDPTNVFEKFPQETALSKFSVDGLNVRQFRFRDLTLESWL QSRNSRYIEDFEEYSLLGRGGFGSVYHVRNKIDGAEYAMKKINSTFQQMSYSKIFREI KCLAKMDHPNVIRYFSSWVESTTEATQMPIVMSKNSSRVLGTSSYCDVNGMDSIIFEP TESSALTDDILFAEDPGTESIISTSRKSSYSSTTESSNFENLESPRNLHDSNVSTFNN TTILDDDYSSSMHISKTGPTHSFIIYIQMQLCFDDLESYLIRRNHFLSFPLCKEQIQL HTDLFRMIINGVMYVHEGVNLIHRDIKPSNIFLAKSLPEDRGSVPLISYNDKNDLKEY ITPKIGDFGLVVENKKNTETALSFLERNHLPNLQDETQHIGTATYAAPELLDAMSSQH NKFTKKIDTFSLGMVLFELLHPFQTNMERATKLQDLRRGNLPEEFVEQHICESSLILW MTAKDPTKRPSLLEVLNCGLLLPNQVSMPNISNIVSTNHLDVETQMKLIMDENQRLRE QIAVLRSRIQHLETR" ORIGIN 1 aacaattctc taaccttcca ttgtaagata cgagattagc tggttgcgat taacgggatt 61 ttgacaaata ttttgataag tgcagaaaaa aactggttgt tttcttaatg cctttttcac 121 ttccatcatc acaaatatgc gatttttcaa cgctcacaag tcagcggaag atgggaatta 181 ctcagagaca acaaatgcaa taagtttaaa aaatgaaaga caatcaaggg atttgtctgt 241 caataaacat gggcggatgc ttttaactgc tttgttggaa aatttttgtc aactgtatga 301 caataatcct gccaagtcca aacgactttt tgctttaatt tgccatactc ttcaaaaaat 361 aggtattttg gaagaagaat atattgaaga acttgcagcc gttagatcca attatcagga 421 tgctttacac catttgattc tgcaagcgcg tgaggcaatc cgtctcgacg atgctgaaga 481 gcgactttta gcactacccg atcccaccaa tgtatttgaa aaatttccac aagaaactgc 541 tctttcgaaa ttctctgtag atggattaaa tgtaagacag ttccgattcc gtgatcttac 601 gcttgagagt tggttacagt caagaaactc tcgttacata gaggactttg aggagtattc 661 tttactagga agaggtggat ttggatcagt atatcacgta cgaaataaga ttgacggtgc 721 tgaatacgca atgaagaaaa ttaattcaac atttcagcaa atgtcttatt ccaaaatatt 781 tagagaaatc aaatgtctag caaaaatgga tcatccaaat gttattcgat acttttcgag 841 ctgggtagaa agcaccacag aagcaacaca aatgccgata gtaatgtcta aaaattctag 901 tagagtactt ggaacctcaa gctattgtga tgtcaacgga atggactcca taatttttga 961 accaacagaa tcttctgccc ttacagacga tatactattt gcagaagatc ctggcaccga 1021 gtcgatcatt tcaacttcca gaaaatctag ctactcaagc actactgaat cttctaactt 1081 tgagaattta gaaagccctc gtaatcttca tgactctaat gtttctactt ttaataatac 1141 caccatcttg gatgacgact attctagtag catgcacata tctaaaactg gacccactca 1201 ttcttttatt atttatattc aaatgcagct ttgctttgat gatctagagt cctatctaat 1261 aagaagaaac cattttcttt cattcccact atgtaaggaa caaatacaac tgcatacgga 1321 tttattccga atgataatta atggcgttat gtacgtacat gaaggtgtga acttgatcca 1381 tcgagatatc aaacccagca atatatttct tgctaaatct ttaccggagg accgtgggtc 1441 tgttccttta attagttata atgataaaaa cgatttgaaa gaatacatta ctcctaagat 1501 tggtgatttt ggactcgttg ttgaaaataa aaaaaacaca gaaaccgcac tttcttttct 1561 tgaacgaaac cacttgccta atctgcaaga tgagactcag catataggca ctgcaactta 1621 cgcggctccg gaattgctag atgctatgtc ttctcagcat aataaattta caaaaaaaat 1681 cgatacattc tcattaggaa tggttttgtt tgagctgttg cacccgtttc aaacaaatat 1741 ggaacgtgca acaaaacttc aagaccttcg tcgaggaaat cttcctgaag agttcgttga 1801 gcaacatatt tgtgagtcaa gtttaatttt atggatgaca gccaaagacc ccacgaagcg 1861 accatcactt ctggaagttc tcaattgtgg actattatta cctaaccaag tctcaatgcc 1921 aaatatatca aatattgtat caacaaacca cttggatgtt gaaactcaaa tgaaacttat 1981 aatggatgaa aatcagcgac tgcgtgaaca aattgctgtt ctacgatcca ggattcaaca 2041 tcttgaaacc cgctaaacta aaaatcttca ctttttaata cttaaatttc cagtcaattt 2101 gttcagtttc ccgaaagtat agcattattt at //