Dbfetch
ID AF003293; SV 1; linear; gDNA; STD; MUS; 570 BP. XX AC AF003293; XX DT 13-FEB-1998 (Rel. 199807-5, arrived in LIGM-DB) DT 15-JUN-2024 (Rel. 202424-6, Last updated, Version 13) XX DE Mus musculus Ig kappa light chain variable region gene, partial cds. XX KW antigen receptor; Immunoglobulin superfamily (IgSF); immunoglobulin (IG); KW IG-Light; IG-Light-Kappa-IGK; variable; promoter; regular; gDNA; germline; KW functional; V-gene. XX OS Mus musculus (house mouse) OC cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; OC Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; OC Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; OC Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; OC Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus. XX RN [1] RP 1-570 RA Mochizuki H., Tsujimoto H.; RT ; RL Submitted (19-JAN-2011) to the INSDC. RL Contact:Hiroyuki Mochizuki Graduate School of Agricultural and Life RL Sciences, The University of Tokyo, Department of Veterinary Internal RL Medicine; Yayoi 1-1-1 Veterinary Medical Center, Bunkyo-ku, Tokyo 113-8657, RL Japan XX RN [2] RP 1-570 RA Ulrich H.D., Schultz P.G.; RT ; RL Submitted (09-MAY-1997) to the INSDC. RL ZMBH, Universitaet Heidelberg, Im Neuenheimer Feld 282, Heidelberg D-69120, RL Germany XX DR EPD; EP11154; MM_IGKM. DR MD5; dcb5297e9c34713e8cd60b7815dfbc96. XX CC IMGT/LIGM-DB annotation level: by annotators XX FH Key Location/Qualifiers FH FT V-GENE 1..>570 FT /partial FT /cell_line="MOPC41" FT /db_xref="taxon:10090" FT /IMGT_allele="IGKV9-120*01" FT /IMGT_gene="IGKV9-120" FT /mol_type="genomic DNA" FT /organism="Mus musculus" FT /strain="BALB/c; A/J; Swiss Webster" FT /tissue_type="liver" FT 5'UTR 1..98 FT OCTAMER 8..15 FT TATA_BOX 47..52 FT L-PART1 99..153 FT /translation="MDMRAPAQIFGFLLLLFP" FT /protein_id="AAB97638.1" FT INIT-CODON 99..101 FT /translation="M" FT DONOR-SPLICE 153..155 FT V-INTRON 154..274 FT ACCEPTOR-SPLICE 272..276 FT V-EXON 275..570 FT /codon_start=3 FT /translation="TRCDIQMTQSPSSLSASLGERVSLTCRASQDIGSSLNWLQQ FT EPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYAS FT SP" FT /protein_id="AAB97638.1" FT L-PART2 275..285 FT /codon_start=3 FT /translation="TRC" FT V-REGION 286..570 FT /translation="DIQMTQSPSSLSASLGERVSLTCRASQDIGSSLNWLQQEPD FT GTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSP" FT /CDR_length="[6.3.7]" FT /IMGT_allele="IGKV9-120*01" FT /IMGT_gene="IGKV9-120" FT FR1-IMGT 286..363 FT /translation="DIQMTQSPSSLSASLGERVSLTCRAS" FT /AA_IMGT="1 to 26" FT 1st-CYS 352..354 FT CDR1-IMGT 364..381 FT /translation="QDIGSS" FT /AA_IMGT="AA 27 to 38, AA 30, 31, 32, 33, 34 and 35 FT are missing" FT FR2-IMGT 382..432 FT /translation="LNWLQQEPDGTIKRLIY" FT /AA_IMGT="39 to 55" FT CONSERVED-TRP 388..390 FT CDR2-IMGT 433..441 FT /translation="ATS" FT /AA_IMGT="AA 56 to 65, AA 58, 59, 60, 61, 62, 63 and FT 64 are missing" FT FR3-IMGT 442..549 FT /translation="SLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYC" FT /AA_IMGT="66 to 104,AA 73,81,82 missing" FT 2nd-CYS 547..549 FT CDR3-IMGT 550..570 FT /translation="LQYASSP" FT /AA_IMGT="AA 105 to 111" XX SQ Sequence 570 BP; 135 A; 131 C; 121 G; 183 T; 0 other; cttaataatt tgcataccct cactgcatcg ccttggggac ttctttatat aacagtcaaa 60 catatcctgt gccattgtca ttgcagtcag gactcagcat ggacatgagg gctcctgcac 120 agatttttgg cttcttgttg ctcttgtttc caggtaaaat gaactaaaat tggaatttca 180 ctgttccact gtggttagtg ttgactggca tttgggggat gtcctctttt atcatgctta 240 tctatgtgga tattcattat gtctccactc ctaggtacca gatgtgacat ccagatgacc 300 cagtctccat cctccttatc tgcctctctg ggagaaagag tcagtctcac ttgtcgggca 360 agtcaggaca ttggtagtag cttaaactgg cttcagcagg aaccagatgg aactattaaa 420 cgcctgatct acgccacatc cagtttagat tctggtgtgc ccaaaaggtt cagtggcagt 480 aggtctgggt cagattattc tctcaccatc agcagccttg agtctgaaga ttttgtagac 540 tattactgtc tacaatatgc tagttctcct 570 //