Dbfetch
ID DM146723; SV 1; linear; unassigned DNA; PAT; SYN; 11461 BP. XX AC DM146723; XX DT 30-JUL-2009 (Rel. 101, Created) DT 30-JUL-2009 (Rel. 101, Last updated, Version 1) XX DE Regulation of Viral Gene Expression. XX KW JP 2009022291-A/28. XX OS synthetic construct OC other sequences; artificial sequences. XX RN [1] RP 1-11461 RA Hiren J.J.R., Heifetz P.B., Patton D.A., Levin J.Z., Que Q., Haan P.T.D.; RT "Regulation of Viral Gene Expression"; RL Patent number JP2009022291-A/28, 05-FEB-2009. RL Novartis AG. XX DR MD5; 8882806404d451469fe370772ed4eb42. XX CC OS Artificial Sequence CC PN JP 2009022291-A/28 CC PD 05-FEB-2009 CC PF 02-SEP-2008 JP 2008224753 CC PR 10-MAY-1999 US 09/309038 CC PI johannes jacobus rudoherusu hiren,peter bernard heifetz, CC PI david andrew patton,joshua zubi levin,qiudeng que,petrus CC PI theodorus de haan CC CC Description of Artificial Sequence: pZU634 CC FH Key Location/Qualifiers CC FT promoter (55)..(1786) CC FT /note="ubiquitin3 promoter plus leader CC FT intron" CC FT misc_feature (1790)..(2574) CC FT /note="PVY nt CP region" CC FT intron (2595)..(3036) CC FT /note="actin2 intronL" CC FT misc_feature Complement((3057)..(3847)) CC FT /note="PVY nt CP region" CC FT terminator (3855)..(4124) CC FT /note="NOS terminator" CC FT promoter (4193)..(5364) CC FT /note="SMAS promoter" CC FT gene (5386)..(6561) CC FT /note="phosphomannose isomerase A coding CC FT sequence" CC FT terminator (6623)..(6897) CC FT /note="nopaline synthase terminator" CC FT misc_feature (6949)..(7080) CC FT /note="nopaline left border fragment" CC FT gene (7359)..(8147) CC FT /note="spectinomycin (aadA) coding sequence" CC FT misc_structure (8157)..(10244) CC FT /note="pVS1 ORI" CC FT misc_structure (10245)..(11179) CC FT /note="pUC19 ORI" CC FT misc_feature (11195)..(11450) CC FT /note="nopaline right border region" CC FT stem_loop (1790)..(3847) CC FT /note="PVY inverted repeat region" XX FH Key Location/Qualifiers FH FT source 1..11461 FT /organism="synthetic construct" FT /mol_type="unassigned DNA" FT /db_xref="taxon:32630" XX SQ Sequence 11461 BP; 3128 A; 2581 C; 2645 G; 3107 T; 0 other; ggccgcagcg gccatttaaa tcaattgggc gcgccgaatt cgagctcggt acccgtaccg 60 gatttggagc caagtctcat aaacgccatt gtggaagaaa gtcttgagtt ggtggtaatg 120 taacagagta gtaagaacag agaagagaga gagtgtgaga tacatgaatt gtcgggcaac 180 aaaaatcctg aacatcttat tttagcaaag agaaagagtt ccgagtctgt agcagaagag 240 tgaggagaaa tttaagctct tggacttgtg aattgttccg cctcttgaat acttcttcaa 300 tcctcatata ttcttcttct atgttacctg aaaaccggca tttaatctcg cgggtttatt 360 ccggttcaac attttttttg ttttgagtta ttatctgggc ttaataacgc aggcctgaaa 420 taaattcaag gcccaactgt tttttttttt aagaagttgc tgttaaaaaa aaaaaaaggg 480 aattaacaac aacaacaaaa aaagataaag aaaataataa caattacttt aattgtagac 540 taaaaaaaca tagattttat catgaaaaaa agagaaaaga aataaaaact tggatcaaaa 600 aaaaaaacat acagatcttc taattattaa cttttcttaa aaattaggtc ctttttccca 660 acaattaggt ttagagtttt ggaattaaac caaaaagatt gttctaaaaa atactcaaat 720 ttggtagata agtttcctta ttttaattag tcaatggtag atactttttt ttcttttctt 780 tattagagta gattagaatc ttttatgcca agttttgata aattaaatca agaagataaa 840 ctatcataat caacatgaaa ttaaaagaaa aatctcatat atagtattag tattctctat 900 atatattatg attgcttatt cttaatgggt tgggttaacc aagacatagt cttaatggaa 960 agaatctttt ttgaactttt tccttattga ttaaattctt ctatagaaaa gaaagaaatt 1020 atttgaggaa aagtatatac aaaaagaaaa atagaaaaat gtcagtgaag cagatgtaat 1080 ggatgaccta atccaaccac caccatagga tgtttctact tgagtcggtc ttttaaaaac 1140 gcacggtgga aaatatgaca cgtatcatat gattccttcc tttagtttcg tgataataat 1200 cctcaactga tatcttcctt tttttgtttt ggctaaagat attttattct cattaataga 1260 aaagacggtt ttgggctttt ggtttgcgat ataaagaaga ccttcgtgtg gaagataata 1320 attcatcctt tcgtcttttt ctgactcttc aatctctccc aaagcctaaa gcgatctctg 1380 caaatctctc gcgactctct ctttcaaggt atattttctg attctttttg tttttgattc 1440 gtatctgatc tccaattttt gttatgtgga ttattgaatc ttttgtataa attgcttttg 1500 acaatattgt tcgtttcgtc aatccagctt ctaaattttg tcctgattac taagatatcg 1560 attcgtagtg tttacatctg tgtaatttct tgcttgattg tgaaattagg attttcaagg 1620 acgatctatt caatttttgt gttttctttg ttcgattctc tctgttttag gtttcttatg 1680 tttagatccg tttctctttg gtgttgtttt gatttctctt acggcttttg atttggtata 1740 tgttcgctga ttggtttcta cttgttctat tgttttattt caggtggggg atccaatggc 1800 cacgaattaa agctatcacg tccaaaatga gaatgcccaa gagtaagggt gcaactgtac 1860 taaatttgga acacctactc gagtatgctc cacagcaaat tgaaatctca aatactcgag 1920 caactcaatc acagtttgat acatggtatg aagcagtaca acttgcatac gacataggag 1980 aaactgaaat gccaactgtg atgaatgggc ttatggtttg gtgcattgaa aatggaacct 2040 cgccaaatat caatggagtt tgggttatga tggatggaga tgaacaagtc gaatacccac 2100 tgaaaccaat cgttgagaat gcaaaaccaa cacttaggca aatcatggca catttctcag 2160 atgttgcaga agcgtatata gaaatgcgca acaaaaagga accatatatg ccacgatatg 2220 gtttagttcg taatctgcgc gatggaagtt tggctcgcta tgcttttgac ttttatgaag 2280 ttacatcacg tacaccagtg agggctagag aggcacacat tcaaatgaag gccgcagctt 2340 taaaatcagc tcaatctcga cttttcggat tggatggtgg cattagtaca caagaggaaa 2400 acacagagag gcacaccacc gaggatgttt ctccaagtat gcatactcta cttggagtga 2460 agaacatgtg attgtagtgt ctttccggac gatatataga tatttatgtt tgcagtaagt 2520 attttggctt ttcctgtact acttttatcg taattaataa tcgtttgaat ccgcggccgc 2580 tctttctttc caaggtaata ggaactttct ggatctactt tatttgctgg atctcgatct 2640 tgttttctca atttccttga gatctggaat tcgtttaatt tggatctgtg aacctccact 2700 aaatcttttg gttttactag aatcgatcta agttgaccga tcagttagct cgattatagc 2760 taccagaatt tggcttgacc ttgatggaga gatccatgtt catgttacct gggaaatgat 2820 ttgtatatgt gaattgaaat ctgaactgtt gaagttagat tgaatctgaa cactgtcaat 2880 gttagattga atctgaacac tgtttaagtt agatgaagtt tgtgtataga ttcttcgaaa 2940 ctttaggatt tgtagtgtcg tacgttgaac agaaagctat ttctgattca atcagggttt 3000 atttgactgt attgaactct ttttgtgtgt ttgcagctca taaaaaatgg cgtcgaccgc 3060 ggattcaaac gattattaat tacgataaaa gtagtacagg aaaagccaaa atacttactg 3120 caaacataaa tatctatata tcgtccggaa agacactaca atcacatgtt cttcactcca 3180 agtagagtat gcatacttgg agaaacatcc tcggtggtgt gcctctctgt gttttcctct 3240 tgtgtactaa tgccaccatc caatccgaaa agtcgagatt gagctgattt taaagctgcg 3300 gccttcattt gaatgtgtgc ctctctagcc ctcactggtg tacgtgatgt aacttcataa 3360 aagtcaaaag catagcgagc caaacttcca tcgcgcagat tacgaactaa accatatcgt 3420 ggcatatatg gttccttttt gttgcgcatt tctatatacg cttctgcaac atctgagaaa 3480 tgtgccatga tttgcctaag tgttggtttt gcattctcaa cgattggttt cagtgggtat 3540 tcgacttgtt catctccatc catcataacc caaactccat tgatatttgg cgaggttcca 3600 ttttcaatgc accaaaccat aagcccattc atcacagttg gcatttcagt ttctcctatg 3660 tcgtatgcaa gttgtactgc ttcataccat gtatcaaact gtgattgagt tgctcgagta 3720 tttgagattt caatttgctg tggagcatac tcgagtaggt gttccaaatt tagtacagtt 3780 gcacccttac tcttgggcat tctcattttg gacgtgatag ctttaattcg tggccattgg 3840 atccatggtg atcactgcag atcgttcaaa catttggcaa taaagtttct taagattgaa 3900 tcctgttgcc ggtcttgcga tgattatcat ataatttctg ttgaattacg ttaagcatgt 3960 aataattaac atgtaatgca tgacgttatt tatgagatgg gtttttatga ttagagtccc 4020 gcaattatac atttaatacg cgatagaaaa caaaatatag cgcgcaacct aggataaatt 4080 atcgcgcgcg gtgtcatcta tgttactaga tctctagaaa gcttcgtacg ttaattaatt 4140 cgaatccgga gcggccgcag ggctagcatc gatggtaccg agctcgagac tatacaggcc 4200 aaattcgctc ttagccgtac aatattactc accggtgcga tgccccccat cgtaggtgaa 4260 ggtggaaatt aatgatccat cttgagacca caggcccaca acagctacca gtttcctcaa 4320 gggtccacca aaaacgtaag cgcttacgta catggtcgat aagaaaaggc aatttgtaga 4380 tgttaacatc caacgtcgct ttcagggatc ccgaattcca agcttggaat tcgggatcct 4440 acaggccaaa ttcgctctta gccgtacaat attactcacc ggtgcgatgc cccccatcgt 4500 aggtgaaggt ggaaattaat gatccatctt gagaccacag gcccacaaca gctaccagtt 4560 tcctcaaggg tccaccaaaa acgtaagcgc ttacgtacat ggtcgataag aaaaggcaat 4620 ttgtagatgt taacatccaa cgtcgctttc agggatcccg aattccaagc ttggaattcg 4680 ggatcctaca ggccaaattc gctcttagcc gtacaatatt actcaccggt gcgatccccc 4740 catcgtaggt gaaggtggaa attaatgatc catcttgaga ccacaggccc acaacagcta 4800 ccagtttcct caagggtcca ccaaaaacgt aagcgcttac gtacatggtc gataagaaaa 4860 ggcaatttgt agatgttaac atccaacgtc gctttcaggg atcccgaatt ccaagcttgg 4920 gctgcaggtc aatcccattg cttttgaagc agctcaacat tgatctcttt ctcgagggag 4980 atttttcaaa tcagtgcgca agacgtgacg taagtatccg agtcagtttt tatttttcta 5040 ctaatttggt cgtttatttc ggcgtgtagg acatggcaac cgggcctgaa tttcgcgggt 5100 attctgtttc tattccaact ttttcttgat ccgcagccat taacgacttt tgaatagata 5160 cgctgacacg ccaagcctcg ctagtcaaaa gtgtaccaaa caacgcttta cagcaagaac 5220 ggaatgcgcg tgacgctcgc ggtgacgcca tttcgccttt tcagaaatgg ataaatagcc 5280 ttgcttccta ttatatcttc ccaaattacc aatacattac actagcatct gaatttcata 5340 accaatctcg atacaccaaa tcgagatctg cagggatccc cgatcatgca aaaactcatt 5400 aactcagtgc aaaactatgc ctggggcagc aaaacggcgt tgactgaact ttatggtatg 5460 gaaaatccgt ccagccagcc gatggccgag ctgtggatgg gcgcacatcc gaaaagcagt 5520 tcacgagtgc agaatgccgc cggagatatc gtttcactgc gtgatgtgat tgagagtgat 5580 aaatcgactc tgctcggaga ggccgttgcc aaacgctttg gcgaactgcc tttcctgttc 5640 aaagtattat gcgcagcaca gccactctcc attcaggttc atccaaacaa acacaattct 5700 gaaatcggtt ttgccaaaga aaatgccgca ggtatcccga tggatgccgc cgagcgtaac 5760 tataaagatc ctaaccacaa gccggagctg gtttttgcgc tgacgccttt ccttgcgatg 5820 aacgcgtttc gtgaattttc cgagattgtc tccctactcc agccggtcgc aggtgcacat 5880 ccggcgattg ctcacttttt acaacagcct gatgccgaac gtttaagcga actgttcgcc 5940 agcctgttga atatgcaggg tgaagaaaaa tcccgcgcgc tggcgatttt aaaatcggcc 6000 ctcgatagcc agcagggtga accgtggcaa acgattcgtt taatttctga attttacccg 6060 gaagacagcg gtctgttctc cccgctattg ctgaatgtgg tgaaattgaa ccctggcgaa 6120 gcgatgttcc tgttcgctga aacaccgcac gcttacctgc aaggcgtggc gctggaagtg 6180 atggcaaact ccgataacgt gctgcgtgcg ggtctgacgc ctaaatacat tgatattccg 6240 gaactggttg ccaatgtgaa attcgaagcc aaaccggcta accagttgtt gacccagccg 6300 gtgaaacaag gtgcagaact ggacttcccg attccagtgg atgattttgc cttctcgctg 6360 catgacctta gtgataaaga aaccaccatt agccagcaga gtgccgccat tttgttctgc 6420 gtcgaaggcg atgcaacgtt gtggaaaggt tctcagcagt tacagcttaa accgggtgaa 6480 tcagcgttta ttgccgccaa cgaatcaccg gtgactgtca aaggccacgg ccgtttagcg 6540 cgtgtttaca acaagctgta agagcttact gaaaaaatta acatctcttg ctaagctggg 6600 agctcgtcga cggatcgaat tcctgcagat cgttcaaaca tttggcaata aagtttctta 6660 agattgaatc ctgttgccgg tcttgcgatg attatcatat aatttctgtt gaattacgtt 6720 aagcatgtaa taattaacat gtaatgcatg acgttattta tgagatgggt ttttatgatt 6780 agagtcccgc aattatacat ttaatacgcg atagaaaaca aaatatagcg cgcaaactag 6840 gataaattat cgcgcgcggt gtcatctatg ttactagatc tctagaacta gtggatctgc 6900 tagccctgca ggaaatttac cggtgcccgg gcggccagca tggccgtatc cgcaatgtgt 6960 tattaagttg tctaagcgtc aatttgttta caccacaata tatcctgcca ccagccagcc 7020 aacagctccc cgaccggcag ctcggcacaa aatcaccact cgatacaggc agcccatcag 7080 aattaattct catgtttgac agcttatcat cgactgcacg gtgcaccaat gcttctggcg 7140 tcaggcagcc atcggaagct gtggtatggc tgtgcaggtc gtaaatcact gcataattcg 7200 tgtcgctcaa ggcgcactcc cgttctggat aatgtttttt gcgccgacat cataacggtt 7260 ctggcaaata ttctgaaatg agctgttgac aattaatcat cggctcgtat aatgtgtgga 7320 attgtgagcg gataacaatt tcacacagga aacagaccat gagggaagcg gtgatcgccg 7380 aagtatcgac tcaactatca gaggtagttg gcgtcatcga gcgccatctc gaaccgacgt 7440 tgctggccgt acatttgtac ggctccgcag tggatggcgg cctgaagcca cacagtgata 7500 ttgatttgct ggttacggtg accgtaaggc ttgatgaaac aacgcggcga gctttgatca 7560 acgacctttt ggaaacttcg gcttcccctg gagagagcga gattctccgc gctgtagaag 7620 tcaccattgt tgtgcacgac gacatcattc cgtggcgtta tccagctaag cgcgaactgc 7680 aatttggaga atggcagcgc aatgacattc ttgcaggtat cttcgagcca gccacgatcg 7740 acattgatct ggctatcttg ctgacaaaag caagagaaca tagcgttgcc ttggtaggtc 7800 cagcggcgga ggaactcttt gatccggttc ctgaacagga tctatttgag gcgctaaatg 7860 aaaccttaac gctatggaac tcgccgcccg actgggctgg cgatgagcga aatgtagtgc 7920 ttacgttgtc ccgcatttgg tacagcgcag taaccggcaa aatcgcgccg aaggatgtcg 7980 ctgccgactg ggcaatggag cgcctgccgg cccagtatca gcccgtcata cttgaagcta 8040 ggcaggctta tcttggacaa gaagatcgct tggcctcgcg cgcagatcag ttggaagaat 8100 ttgttcacta cgtgaaaggc gagatcacca aggtagtcgg caaataaagc tctagtggat 8160 ccccgaggaa tcggcgtgac ggtcgcaaac catccggccc ggtacaaatc ggcgcggcgc 8220 tgggtgatga cctggtggag aagttgaagg ccgcgcaggc cgcccagcgg caacgcatcg 8280 aggcagaagc acgccccggt gaatcgtggc aagcggccgc tgatcgaatc cgcaaagaat 8340 cccggcaacc gccggcagcc ggtgcgccgt cgattaggaa gccgcccaag ggcgacgagc 8400 aaccagattt tttcgttccg atgctctatg acgtgggcac ccgcgatagt cgcagcatca 8460 tggacgtggc cgttttccgt ctgtcgaagc gtgaccgacg agctggcgag gtgatccgct 8520 acgagcttcc agacgggcac gtagaggttt cagcagggcc ggccggcatg gccagtgtgt 8580 gggattacga cctggtactg atggcggttt cccatctaac cgaatccatg aaccgatacc 8640 gggaagggaa gggagacaag cccggccgcg tgttccgtcc acacgttgcg gacgtactca 8700 agttctgccg gcgagccgat ggcggaaagc agaaagacga cctggtagaa acctgcattc 8760 ggttaaacac cacgcacgtt gccatgcagc gtacgaagaa ggccaagaac ggccgcctgg 8820 tgacggtatc cgagggtgaa gccttgatta gccgctacaa gatcgtaaag agcgaaaccg 8880 ggcggccgga gtacatcgag atcgagctag ctgattggat gtaccgcgag atcacagaag 8940 gcaagaaccc ggacgtgctg acggttcacc ccgattactt tttgatcgat cccggcatcg 9000 gccgttttct ctaccgcctg gcacgccgcg ccgcaggcaa ggcagaagcc agatggttgt 9060 tcaagacgat ctacgaacgc agtggcagcg ccggagagtt caagaagttc tgtttcaccg 9120 tgcgcaagct gatcgggtca aatgacctgc cggagtacga tttgaaggag gaggcggggc 9180 aggctggccc gatcctagtc atgcgctacc gcaacctgat cgagggcgaa gcatccgccg 9240 gttcctaatg tacggagcag atgctagggc aaattgccct agcaggggaa aaaggtcgaa 9300 aaggtctctt tcctgtggat agcacgtaca ttgggaaccc aaagccgtac attgggaacc 9360 ggaacccgta cattgggaac ccaaagccgt acattgggaa ccggtcacac atgtaagtga 9420 ctgatataaa agagaaaaaa ggcgattttt ccgcctaaaa ctctttaaaa cttattaaaa 9480 ctcttaaaac ccgcctggcc tgtgcataac tgtctggcca gcgcacagcc gaagagctgc 9540 aaaaagcgcc tacccttcgg tcgctgcgct ccctacgccc cgccgcttcg cgtcggccta 9600 tcgcggccgc tggccgctca aaaatggctg gcctacggcc aggcaatcta ccagggcgcg 9660 gacaagccgc gccgtcgcca ctcgaccgcc ggcgctgagg tctgcctcgt gaagaaggtg 9720 ttgctgactc ataccaggcc tgaatcgccc catcatccag ccagaaagtg agggagccac 9780 ggttgatgag agctttgttg taggtggacc agttggtgat tttgaacttt tgctttgcca 9840 cggaacggtc tgcgttgtcg ggaagatgcg tgatctgatc cttcaactca gcaaaagttc 9900 gatttattca acaaagccgc cgtcccgtca agtcagcgta atgctctgcc agtgttacaa 9960 ccaattaacc aattctgatt agaaaaactc atcgagcatc aaatgaaact gcaatttatt 10020 catatcagga ttatcaatac catatttttg aaaaagccgt ttctgtaatg aaggagaaaa 10080 ctcaccgagg cagttccata ggatggcaag atcctggtat cggtctgcga ttccgactcg 10140 tccaacatca atacaaccta ttaatttccc ctcgtcaaaa ataaggttat caagtgagaa 10200 atcaccatga gtgacgactg aatccggtga gaatggcaaa agctctgcat taatgaatcg 10260 gccaacgcgc ggggagaggc ggtttgcgta ttgggcgctc ttccgcttcc tcgctcactg 10320 actcgctgcg ctcggtcgtt cggctgcggc gagcggtatc agctcactca aaggcggtaa 10380 tacggttatc cacagaatca ggggataacg caggaaagaa catgtgagca aaaggccagc 10440 aaaaggccag gaaccgtaaa aaggccgcgt tgctggcgtt tttccatagg ctccgccccc 10500 ctgacgagca tcacaaaaat cgacgctcaa gtcagaggtg gcgaaacccg acaggactat 10560 aaagatacca ggcgtttccc cctggaagct ccctcgtgcg ctctcctgtt ccgaccctgc 10620 cgcttaccgg atacctgtcc gcctttctcc cttcgggaag cgtggcgctt tctcaatgct 10680 cacgctgtag gtatctcagt tcggtgtagg tcgttcgctc caagctgggc tgtgtgcacg 10740 aaccccccgt tcagcccgac cgctgcgcct tatccggtaa ctatcgtctt gagtccaacc 10800 cggtaagaca cgacttatcg ccactggcag cagccactgg taacaggatt agcagagcga 10860 ggtatgtagg cggtgctaca gagttcttga agtggtggcc taactacggc tacactagaa 10920 ggacagtatt tggtatctgc gctctgctga agccagttac cttcggaaaa agagttggta 10980 gctcttgatc cggcaaacaa accaccgctg gtagcggtgg tttttttgtt tgcaagcagc 11040 agattacgcg cagaaaaaaa ggatctcaag aagatccttt gatcttttct acggggtctg 11100 acgctcagtg gaacgaaaac tcacgttaag ggattttggt catgagatta tcaaaaagga 11160 tcttcaccta gatccttttg atccggaatt aattcctgtg gttggcatgc acatacaaat 11220 ggacgaacgg ataaaccttt tcacgccctt ttaaatatcc gattattcta ataaacgctc 11280 ttttctctta ggtttacccg ccaatatatc ctgtcaaaca ctgatagttt aaactgaagg 11340 cgggaaacga caatctgatc atgagcggag aattaaggga gtcacgttat gacccccgcc 11400 gatgacgcgg gacaagccgt tttacgtttg gaactgacag aaccgcaacg ctgcaggaat 11460 t 11461 //