ID X80537; SV 1; linear; genomic RNA; STD; VRL; 1002 BP. XX AC X80537; XX DT 19-AUG-1994 (Rel. 40, Created) DT 02-DEC-1996 (Rel. 50, Last updated, Version 10) XX DE Porcine rotavirus (CC86) mRNA for nonstructural phosphoprotein NSP5 XX KW non-structural protein; NSP5 gene. XX OS Porcine rotavirus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Rotavirus. XX RN [1] RP 1-1002 RA Blackhall J.; RT ; RL Submitted (09-AUG-1994) to the INSDC. RL J. Blackhall, Dept of Medical Virology, Uppsala University, Biomedical RL Centre, Husargatan 3, Uppsala 75123, SWEDEN XX RN [2] RP 1-1002 RX DOI; 10.1006/viro.1996.0586. RX PUBMED; 8918545. RA Blackhall J., Fuentes A., Magnusson G.; RT "Genetic stability of a porcine rotavirus RNA segment during repeated RT plaque isolation"; RL Virology 225(1):181-190(1996). XX DR MD5; 499ca078a4c02eee6496da217e7c1b3a. XX FH Key Location/Qualifiers FH FT source 1..1002 FT /organism="Porcine rotavirus" FT /mol_type="genomic RNA" FT /db_xref="taxon:10913" FT 5'UTR 1..21 FT CDS 22..615 FT /product="nonstructural phosphoprotein NSP5" FT /db_xref="GOA:Q89849" FT /db_xref="InterPro:IPR002512" FT /db_xref="UniProtKB/TrEMBL:Q89849" FT /protein_id="CAA56677.1" FT /translation="MSLSIDVTSLPSISSSIFKNESSSTTSTLSGKSIGRSEQYISPDA FT EAFNKYMLSKSPEDIGPSDSASNDPLTSFSIRSNAVKTNADAGVSMDSSTQSRPSSNVG FT CDQVDFSLTKGINVNANLDSCISISTDHKKEKSKKDKSRKHYPRIEADSDSEDYVLDDS FT DSDDGKCKNCKYKKKYFALRMRMKQVAMQLIEDL" FT CDS 80..358 FT /note="ORF (+1)" FT /db_xref="InterPro:IPR006950" FT /db_xref="UniProtKB/TrEMBL:Q89917" FT /protein_id="CAA56678.1" FT /translation="MNHLLQRQLFLENLLVGVNSTFHQMQKHSINTCCRSLQRILDHLI FT LLQTIHSPAFRLDRMQLRQMQMLACLWIHQRNHDLQATLGAIKWISP" FT repeat_region 629..958 FT /rpt_type=DIRECT FT /note="duplication of 291 to 620" FT 3'UTR 959..1002 XX SQ Sequence 1002 BP; 347 A; 183 C; 191 G; 281 T; 0 other; ggcttttaaa gcgctacagt gatgtctctc agcattgacg taacgagtct tccctcaatt 60 tcttctagta tctttaagaa tgaatcatct tctacaacgt caactctttc tggaaaatct 120 attggtagga gtgaacagta catttcacca gatgcagaag cattcaataa atacatgctg 180 tcgaagtctc cagaggatat tggaccatct gattctgctt caaacgatcc actcaccagc 240 ttttcgatta gatcgaatgc agttaagaca aatgcagatg ctggcgtgtc tatggattca 300 tcaacgcaat cacgaccttc aagcaacgtt gggtgcgatc aagtggattt ctccttaact 360 aaaggtatta atgttaatgc taatcttgat tcatgtatat caatctcaac tgatcataag 420 aaggagaaat ccaaaaagga taaaagtagg aaacactacc caagaattga agcagattct 480 gattccgaag attacgtttt agatgattca gacagtgatg acggtaaatg caagaattgt 540 aaatataaaa agaagtattt cgcacttaga atgaggatga agcaagtcgc aatgcaattg 600 atcgaagatt tataacgtca ttttttcgtc tggattcatc aacgcaatca cgaccttcaa 660 gcaacgttgg gtgcgatcaa gtggatttct ccttaactaa aggtattaat gttagtgcta 720 atcttaattc atgtatatca atctcaacta atcataaaaa ggagaaatcc aaaaagaata 780 aaagtaggaa acactaccca agaattgaag caaattctga ttccgaagat tacgttttag 840 atgattcaaa cagtgatgac gataaatgca agaattgtaa atataaaaag aagtatttcg 900 cacttagaat gaggatgaag caagtcgcaa tgcaattgat cgaagatttg taatgtcaac 960 ctgagagcac actagggagc tccccactcc cgttttgtga cc 1002 //