ID X17095; SV 1; linear; genomic DNA; STD; VRL; 2781 BP. XX AC X17095; XX DT 29-JAN-1990 (Rel. 22, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 6) XX DE African cassava mosaic virus-[Nigeria] DNA 1 XX KW AL1 protein; coat protein; ORF1; ORF2; ORF3. XX OS African cassava mosaic virus - [Nigeria] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Morris B.A.M.; RT ; RL Submitted (06-NOV-1989) to the INSDC. RL Morris B. A. M., D.S.I.R. Plant Protection, Private Bag, Auckland, New RL Zealand. XX RN [2] RP 1-2781 RX DOI; 10.1093/nar/18.1.197. RX PUBMED; 2308831. RA Morris B., Coates L., Lowe S., Richardson K., Eddy P.; RT "Nucleotide sequence of the infectious cloned DNA components of African RT cassava mosaic virus (Nigerian strain)"; RL Nucleic Acids Res. 18(1):197-198(1990). XX DR MD5; f405cf004f3daae73bf74c727700b800. DR EuropePMC; PMC1079959; 15784145. DR EuropePMC; PMC110531; 9811744. DR EuropePMC; PMC3328289; 22416906. DR InterPro; IPR002488; Gemini_C4. DR UniProtKB/Swiss-Prot; P0C6G2; AC4_CLVN. XX CC See for DNA 2. CC CC Data kindly reviewed (19-MAR-1990) by Morris B.A.M. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="African cassava mosaic virus - [Nigeria]" FT /strain="Nigerian" FT /mol_type="genomic DNA" FT /clone="pNG008" FT /db_xref="taxon:222073" FT CDS 288..629 FT /product="hypothetical protein" FT /note="ORF1" FT /db_xref="GOA:P14967" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/Swiss-Prot:P14967" FT /protein_id="CAA34949.1" FT /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRDL FT ISVIRARNYVEATRRYHHFHSRLEGSSKAELRQPIQEPCYCPHCPRHKSKTGLDEQAHV FT QKAHDVQDV" FT CDS 448..1224 FT /product="coat protein" FT /db_xref="GOA:P14966" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/Swiss-Prot:P14966" FT /protein_id="CAA34950.1" FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW FT MNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH FT RVGKRFCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNTPQDFGQIFNMFDN FT EPSTATIENDLRDRFQVLRKFHATVIGGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN" FT CDS complement(1221..1625) FT /product="hypothetical protein" FT /note="ORF2" FT /db_xref="GOA:P14969" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/Swiss-Prot:P14969" FT /protein_id="CAA34951.1" FT /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLLNQDI FT ITVQVRFNHNLRKELGIHKCFLNFRIWTTLRPQTGLFLRVFRYQVLKYLDNIGVISIND FT VIRAACHVLFNVIEKTIECQLTHEIKFNVY" FT CDS complement(1366..1773) FT /product="hypothetical protein" FT /note="ORF3" FT /db_xref="GOA:P14968" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/Swiss-Prot:P14968" FT /protein_id="CAA34952.1" FT /translation="MQSSSPSPNHSTQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLHI FT NCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNHQAPTTTIPAEPGHHNSPGSIQSQ FT PEEGAGDSQMFSQLQDLDDLTASDWSFLKSL" FT CDS complement(1682..2758) FT /product="AL1 protein" FT /db_xref="GOA:P14972" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/Swiss-Prot:P14972" FT /protein_id="CAA34953.1" FT /translation="MRTPRFRVQAKNVFLTYPNCSIPKEHLLSFIQTLSLPSNPKFIKI FT CRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPSCSTNFHPNIQGAKSSSDVKSYLD FT KDGDTVEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELVPKDFVLQFHN FT LNSNLDRIFQEPPAPYVSPFPCSSFDQVPDELEEWVADNVRDSAARPWRPNSIVIEGDS FT RTGKTIWARSLGPHNYLCGHLDLSPKVFNNDAWYNVIDDVDPHYLKHFKEFMGSQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQEALKAWALKNAIFITLTEPLY FT SGSNQSQSQTIQEASHPA" XX SQ Sequence 2781 BP; 751 A; 567 C; 676 G; 787 T; 0 other; ctcaactgga gacacccttg agcatctcct cctattaatt ggagacatta tatagttgtc 60 tccaaatggc attcttgtaa taagtggtac tttaatttga atgaaaaggc tcaaaaggcg 120 cagaacaccc aaggggccaa ccgtataata ttaccggttg gccccgcccc cctttaaacg 180 tggtccccgc gcactactca tgtcggccaa tcatgctgta gcgttaaagg ttatttatta 240 gtggtggacc actatatact tacaggccaa gtcgttgcta gtgcgcaatg tgggatccac 300 tggtgaatga gtttccagac tccgtgcatg ggcttaggtg tatgcttgca attaaatatt 360 tgcaggcctt agaggataca tacgagccca gtactttggg ccacgatctg gttagagatc 420 taatctcagt tatcagggct cgtaattatg tcgaagcgac caggagatat catcatttcc 480 actccaggct cgaaggttcg tcgaaggctg aacttcgaca gcccatacag gaaccgtgct 540 actgccccca ctgtccacgt cacaaatcga aaacgggcct ggatgaacag gcccatgtac 600 agaaagccca tgatgtacag gatgtataga agcccagaca tacctagagg ctgtgaaggc 660 ccatgtaagg tccagtcgtt tgagcagagg gatgatgtga agcaccttgg tatctgtaag 720 gtgattagtg atgtgacacg tgggcctggg ctgacacaca gagtcggaaa gaggttttgt 780 atcaagtcca tttacattct tggtaagatc tggatggatg aaaatattaa gaagcagaat 840 cacacgaata atgtgatgtt ttacctgctt agggatagaa ggccttatgg caatacgccc 900 caagactttg ggcagatatt taacatgttt gataatgagc ccagtactgc aacaatcgag 960 aacgatttga gggataggtt tcaggtgttg aggaaatttc atgccactgt tattggtggt 1020 ccatctggca tgaaggagca ggcgttggtg aaaaggtttt acaggttgaa tcatcacgtg 1080 acatacaatc atcaggaggc agggaagtac gagaatcaca cagagaatgc tttgcttttg 1140 tacatggcat gtactcatgc ctccaatcct gtatatgcta cgttgaaaat acgtatatac 1200 ttctatgaca gtattggcaa ttaataaaca ttgaatttta tttcatgagt caactgacac 1260 tcaatagttt tttcaattac attgaacaaa acatgacaag cagctctaat tacatcgtta 1320 attgagataa cacctatatt atccaagtat ttaagtactt ggtatctaaa gactcttaag 1380 aaaagaccag tctgaggccg taaggtcgtc cagatcctga agttgagaaa acatttgtga 1440 atccccagct ccttcctcag gttgtgattg aatcgaacct ggactgttat gatgtcctgg 1500 ttcagcagga atggtcgttg ttggtgcctg gtgattgtga aatacagggg attgtttatt 1560 tcccaggtat acacgccatt cattgcttga ggagcagtga tgagttcccc tgtgcgtaaa 1620 tccatgattg gagcagttga tatggaggta atatgaacag ccacagacaa gatccactct 1680 cctacgccgg atggctcgct tcttgaattg tctgtgactg actttgattg gaacctgagt 1740 agagtggttc ggtgagggtg atgaagattg cattctttaa tgcccaggcc tttagcgctt 1800 cttgcttttc ctcgtcgagg aactctttat aggacgaggt aggtcctgga ttgcagagga 1860 agatagtggg aatgccacct ttaatttgaa cgggtttccc gtatttcgtg ttggactgcc 1920 agtccctctg ggaccccatg aattccttaa agtgctttag gtagtgggga tcgacgtcat 1980 caatgacgtt gtaccaggca tcattattga agaccttagg actaaggtcc aggtgtccac 2040 acaggtaatt gtgtgggcct aaagatctgg cccatatcgt cttccctgtt ctgctatcac 2100 cttctattac aatactattg ggtctccatg gccgcgcagc ggaatcccta acattatcag 2160 cgacccattc ttcaagttca tcaggaactt ggtcaaagga agaacatggg aagggagaaa 2220 cataaggagc tggtggctcc tggaaaatcc tatctaaatt actatttaga ttatgaaact 2280 gaagtacaaa gtcctttggg actaattccc taattacatt aagagcttct gacttactgc 2340 cgctgttaag cgctttggcg taagcatcat tcgctgattg ttgaccgcct ctagcagatc 2400 gtccatcgat ctgaaattgt ccccattcga cggtgtctcc gtccttatcc agataggact 2460 tgacatctga gcttgatttg gcaccttgaa tgttggggtg gaaattggtg ctacagcttg 2520 ggtgtacaca atcgaagaga cgattgttcg taatcgtgat ctttccctcg aattggatga 2580 gggcatgcaa gtgaggttcc ccattctgat gcagctctcg acagatttta atgaacttag 2640 ggtttgatgg gagagatagt gtttgaatga atgacagcag gtgttctttg ggtatagaac 2700 aatttgggta tgtgagaaag acattcttgg cttgaactct aaaacgagga gttcgcattt 2760 tgaccaagtc aattggagac a 2781 //