ID   X00819; SV 1; linear; genomic RNA; STD; VRL; 2055 BP.
XX
AC   X00819;
XX
DT   07-NOV-1985 (Rel. 07, Created)
DT   09-SEP-2004 (Rel. 81, Last updated, Version 4)
XX
DE   Alfalfa mosaic virus (strain S) complete RNA 3 sequence
XX
KW   coat protein.
XX
OS   Alfalfa mosaic virus
OC   Viruses; Riboviria; Bromoviridae; Alfamovirus.
XX
RN   [1]
RP   1-2055
RX   DOI; 10.1016/0300-9084(84)90023-3.
RX   PUBMED; 6205697.
RA   Ravelonandro M., Pinck M., Pinck L.;
RT   "Complete nucleotide sequence of RNA 3 from alfalfa mosaic virus, strain
RT   S";
RL   Biochimie 66(5):395-402(1984).
XX
DR   MD5; 0b624a1018234d10293d852d11ad48e6.
DR   RFAM; RF00196; AMV_RNA1_SL.
DR   RFAM; RF00252; Alfamo_CPB.
XX
CC   Data kindly reviewed (07-NOV-1985) by M. Pinck
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2055
FT                   /organism="Alfalfa mosaic virus"
FT                   /strain="S"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12321"
FT   CDS             258..1160
FT                   /note="P3 protein"
FT                   /db_xref="GOA:P03596"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/Swiss-Prot:P03596"
FT                   /protein_id="CAA25392.1"
FT                   /translation="MENTKTNASSSGMFSSSSFSVSYAEEMLLADEVSKINSMSILGPN
FT                   QLKLCTQLVLSNGAAPVVLSLVSKEKKSISNRMLPKIGQRMYVHHSAIYLLYMPNILKS
FT                   SSGSITLKLFNEATEELVDVDTDHDATQACIFAGRYPRSILAKDAAKGHDLKLVVHAVA
FT                   STKANSAVGVLYPIWEDELSRKQILERGADFLKFPIAETEPVRDLLNAGKLTNFVLDRT
FT                   RLGVGSKSDPSPVLLEPRAKITGKAKTFFIPEGPSVPNTTISGIAPSVRIDAGSPKGLG
FT                   VPKGFTYESFIKDEILPDH"
FT   intron          1161..1209
FT                   /note="intercistronic region"
FT   CDS             1210..1866
FT                   /note="P4 coat protein"
FT                   /db_xref="GOA:P03590"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/Swiss-Prot:P03590"
FT                   /protein_id="CAA25393.1"
FT                   /translation="MSSSQKKAGGKAGKPTKRSQNYAALRKAQLPKPPALKVPVAKPTN
FT                   TILPQTGCVWQSLGTPLSLSSFNGLGVRFLYSFLKDFTGPRILEEDLIYRMVFSITPSH
FT                   AGTFCLTDDVTTEDGRAVAHGNPMQEFPHGAFHANEKFGFELVFTAPTHAGMQNQNFKH
FT                   SYAVALCLDFDAQPEGSKNPSYRFNEVWVERKAFPRAGPLRSLITVGLLDEADDL"
XX
SQ   Sequence 2055 BP; 551 A; 445 C; 461 G; 598 T; 0 other;
     gttttcatct tacacacgct tgtgcaagat agttaatcat tccaattcaa ctcaattaac        60
     gttttttaca gtgtaattcg tacttttcgt aagtaagttt ctgtaaaagc gtttcttgtt       120
     ttaatttggc ctaacacgta attcgtactc ttcgtgagta agttgtgtta gccataccta       180
     tcctttaaat tcctgtcaat ttaaaaagaa aatcattccc attcgcgtaa ttcgtactct       240
     tcgtgagtaa gttgcaaatg gagaatacaa aaacaaatgc ctcgagttct ggaatgtttt       300
     cttcctcaag cttttcagtg tcttatgctg aggaaatgtt actagctgat gaagtttcaa       360
     aaattaactc aatgtcgatt ctgggtccta atcagctaaa gctctgcact caattggtgc       420
     tgtctaatgg agcagcacca gtagttttaa gccttgtgtc aaaggaaaag aaatcgattt       480
     caaatcgtat gcttcctaag atcggacaga ggatgtacgt ccatcactcg gctatttacc       540
     ttctttatat gccaaatata ctaaaaagtt cttcagggag catcaccttg aagcttttta       600
     atgaggctac agaagagtta gtggatgttg acaccgacca tgatgctacc caggcatgta       660
     tatttgctgg acgttacccc cggagtattc tggcgaaaga tgcagcgaaa ggacacgact       720
     tgaaattagt cgtccacgct gttgcttcga ccaaagcgaa ctctgctgtc ggtgttctat       780
     accccatttg ggaagatgag ttaagcagaa agcagatcct cgaaaggggt gccgatttcc       840
     taaagtttcc aattgctgag accgaaccag tccgcgatct cttaaatgct gggaaattga       900
     cgaactttgt tcttgatagg acgaggttag gcgtgggatc aaagagtgat cccagtccgg       960
     ttcttttaga accaagagct aagattaccg ggaaggcaaa gacatttttt attcccgaag      1020
     gtcctagtgt tcctaatacc actataagtg gtatagcacc atcggtgcgt atagatgccg      1080
     gttctccaaa gggtcttgga gttccgaaag ggtttacata tgaaagtttt attaaagatg      1140
     aaatattacc tgatcattga tcggtaatgg gccgttttta tttttaattt tctttcaaat      1200
     acttccatca tgagttcttc acaaaagaaa gctggtggga aagctggtaa acctactaaa      1260
     cgttcccaga attatgctgc tttacgcaaa gctcaactgc cgaaacctcc ggcgttgaaa      1320
     gtcccggttg caaaaccgac gaacactata ctgccacaga cgggctgcgt gtggcaaagc      1380
     ctcgggaccc ctctgagtct gagctctttt aacgggctcg gcgtgagatt cctctacagt      1440
     tttctgaagg atttcacggg acctcggatc ctcgaagagg atctgattta caggatggtg      1500
     ttttccataa caccgtccca tgccggcacc ttttgtctca ctgatgacgt gacgactgag      1560
     gatggtaggg ccgttgcgca tggtaatccc atgcaagaat ttcctcatgg cgcgtttcac      1620
     gctaatgaga agttcgggtt tgagttggtc ttcacagctc ctacccatgc gggaatgcaa      1680
     aatcaaaatt tcaagcattc ctatgccgta gccctctgtc tggacttcga cgcgcagcct      1740
     gagggatcta aaaatccctc ataccgattc aacgaagttt gggttgagag aaaggcgttc      1800
     ccgcgagcag ggcccctccg cagtttgatt actgtggggt tgctcgacga agctgacgat      1860
     ctttgatcgt cattgatgta ccccaataat ttgggatgct aaagtcattt aatgctgacc      1920
     tccactgggt ggattaaggt caaggtatga agtcctattc gctcctgata ggaacgactt      1980
     catattgctt atatatgtgc tggtgcacac atataaatgc tcatgcaaaa ctgcatgaat      2040
     gcccctaagg gatgc                                                       2055
//