ID U93192; SV 1; linear; genomic RNA; STD; VRL; 3439 BP. XX AC U93192; XX DT 03-FEB-1998 (Rel. 54, Created) DT 16-OCT-2003 (Rel. 77, Last updated, Version 2) XX DE Spinach latent virus putative replicase gene, complete cds. XX KW . XX OS Spinach latent virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-3439 RX DOI; 10.1007/s00705-003-0148-z. RX PUBMED; 14551826. RA Scott S.W., Zimmerman M.T., Ge X.; RT "Viruses in subgroup 2 of the genus Ilarvirus share both serological RT relationships and characteristics at the molecular level"; RL Arch. Virol. 148(10):2063-2075(2003). XX RN [2] RP 1-3439 RA Scott S.W.; RT ; RL Submitted (12-MAR-1997) to the INSDC. RL Plant Pathology & Physiology, Clemson University, Long Hall, Clemson, SC RL 29634-0377, USA XX DR MD5; 7852f835fd52c11d82dc34d44e3b7aa8. XX FH Key Location/Qualifiers FH FT source 1..3439 FT /organism="Spinach latent virus" FT /host="Spinacia oleracea" FT /lab_host="Chenopodium quinoa" FT /mol_type="genomic RNA" FT /db_xref="taxon:42680" FT 5'UTR 1..76 FT CDS 77..3247 FT /codon_start=1 FT /product="putative replicase" FT /db_xref="GOA:O57161" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:O57161" FT /protein_id="AAB99733.1" FT /translation="MDTIVQMKVLCYESMILLMIPSDVNAPRPETAIGRLISDAAVSGV FT LRQCDFTAAEASQCFVPIITGRSECIETRFSGREIQFRNFSYSSQSFAAAHRVCEADYI FT YSRFQTRNTTIIDIGGNFCTHSKMGRDNVHSCCPILDVRDGARYTDRFMSVAGALETQP FT DRELRLNYCSNKFEDCDVSAPWAMAIHSISDIPITSVVKHCFRRGVKKLIASVMMDPMM FT LVASQGFMPRLNVQWEIEPDEENKGSRRISFHFVDAPGLSYTHNYDVLMQYMTCNQVII FT SGKAAYRVERVADLSGVFIVEINPGGNCWNERLDLVPMRDVSCAWMTSLKRKTLVRVAI FT PQYIHSWEVKYVIADTDFVRRVAEVSFRQYKPETPLQDLVKSVATMISSASNHCIINGV FT TMQTGTPLAIEDYVPMAVTFVAFAKSRYDSIKEGMKMVRQRGTNIADPNDHYDYEKDGS FT DVKSFSNHIIPMKNTIKSLFFPMKVKMNDNSMLIYSQGILSTVVDEIKTLFGWDVWDTD FT DAVIQSLPSFYKMEDVFQVTSDHYCLSHTLSVDWWLEGLYDSYHDMRVAHKKKLDEEES FT RKTKVENALLKIAEVLEKPDVSDGLKALSELPIISSLLEKKSEEIVTKPQCRDTEKPHI FT NPYADAIKEAQAYYEELEVVNTRNLRGVGDYLFWRKKSNYASVWGADESRVVLEPMARK FT FYSRDRNVSIPEYERGMTVDGFVSIKWVDGNITEDTWKCLSKYAVVLLDSSCVFDAGSR FT IMPGLKKALVMDANFKIVIEDGVAGCGKTTSLLKQAKPDSDLLLAANRETANDAKASGV FT IPKALEYRVRTVDSYLMLRTWFTAERLLVDECFLVHAGLVYAAATLARVKEVIAFGDTK FT QIPFVSRIPTVKLRHASVVGTLKPRTITYRCPRDVTAVLSEKFYGTKVKTFNLVKQSLE FT LKNIDSSTEIPVEKDTLYIAHTQADKHALMRLPGMNGIEVLTTHEAQGKTRDHVILVRL FT SKTTNLLYSGKMPDAGGSHNLVGLSRHKKSLRYFSVFADDPDDQIATGIRWSKTLDEQE FT LAAYRAAG" FT 3'UTR 3248..3439 XX SQ Sequence 3439 BP; 954 A; 637 C; 829 G; 1019 T; 0 other; gtggtattgt gcattattat tttaacgcac aacccggatt aatcaggttt tctgagtata 60 tacccgttag tactcaatgg atacaattgt tcaaatgaaa gtattgtgtt acgagtcgat 120 gatattatta atgatacctt cagacgtaaa cgcaccaagg ccggaaactg ccattggtag 180 gttgatttcc gatgccgctg tttcaggtgt tttgcgacaa tgcgatttca ctgcagcgga 240 agcctctcaa tgttttgttc caattatcac cggaagatca gaatgcattg agacgcgatt 300 ttctggaaga gaaatacagt ttcgcaattt ttcgtattcc tcacaatcat tcgctgctgc 360 gcatcgagtg tgtgaagcgg attatattta tagtcgattc cagacgagaa ataccacgat 420 cattgatatt ggaggaaatt tttgcaccca tagtaaaatg ggtagagata atgttcattc 480 atgttgcccg atattggacg ttcgtgatgg agctcggtat actgacaggt tcatgtctgt 540 ggcgggggct ttggaaaccc agcctgaccg tgagctcaga ctgaactatt gttccaataa 600 atttgaagat tgtgatgttt ccgcaccatg ggcgatggcg attcactcga tttcagatat 660 accgatcaca agtgttgtta agcattgttt ccgcagaggg gtcaagaaat tgatagcctc 720 tgtgatgatg gatcccatga tgcttgttgc ttctcaaggt tttatgccca gattgaatgt 780 tcaatgggaa attgaacctg atgaggagaa caaaggttcc cggcgaattt cttttcattt 840 cgtcgatgct cctggattgt catatactca taactatgac gtgcttatgc agtacatgac 900 ttgtaatcaa gtcataatca gtgggaaagc cgcgtatcga gttgagcgcg ttgcagatct 960 gtctggtgtt tttattgttg agattaaccc tggcggcaac tgctggaatg aaagactgga 1020 tctagttccc atgcgagatg tttcatgcgc gtggatgact tcgttaaaac gtaagacctt 1080 agtgcgggtt gccatcccgc aatatattca ttcatgggaa gttaagtatg tgattgccga 1140 cactgatttt gttagaagag ttgctgaagt gtcgttccgt cagtataaac cagaaacacc 1200 attacaggat ttggtgaaat ctgttgcgac gatgatttcc tctgcttcta accattgcat 1260 tatcaatggt gtcaccatgc aaactggtac accgttggcc attgaggact atgtcccaat 1320 ggcggtgact tttgttgcct tcgctaaatc aagatatgat tcgataaagg aaggcatgaa 1380 aatggttagg cagagaggta ctaatatcgc ggatcctaat gatcattatg attatgagaa 1440 agatggatcg gatgttaaga gtttttcaaa tcacataatt cccatgaaga ataccatcaa 1500 gtctctgttt ttccccatga aagtgaagat gaatgataat tctatgctca tttatagtca 1560 aggaatcttg tcaactgttg ttgatgagat aaaaacactt tttggatggg atgtttggga 1620 cactgacgat gcggtaatac agtctctgcc ctctttttat aagatggagg atgtttttca 1680 agttacgtct gaccactatt gtttatcaca tacattatct gtggattggt ggttggaggg 1740 actgtatgat tcttaccatg acatgcgtgt tgcgcataaa aagaaacttg atgaagaaga 1800 atctcggaag accaaggtcg agaatgcctt attgaaaatt gctgaggttt tggagaaacc 1860 tgatgttagc gatggtctta aagctctttc agaattgccc ataatatcat cattattgga 1920 gaagaagagc gaagaaatcg ttacaaaacc tcaatgcagg gatactgaaa aaccccatat 1980 taatccctat gctgatgcaa tcaaagaggc gcaggcctat tacgaagagc ttgaggtcgt 2040 aaatactcgc aatttgagag gtgttggtga ttacctcttt tggcgaaaga agtcgaacta 2100 tgccagcgtt tggggcgctg atgaatcgag agtggttctt gaacctatgg caaggaagtt 2160 ttactctcga gatagaaatg tttccatacc cgagtatgag cgaggtatga cggttgatgg 2220 tttcgtctcc attaaatggg tggacggaaa cattactgag gacacgtgga agtgtctttc 2280 caaatacgca gttgttttgc tcgactcttc ttgcgtgttt gatgccggtt cacgtattat 2340 gccaggtctg aaaaaggcat tggtaatgga tgcaaatttc aaaatcgtga tcgaggatgg 2400 tgtggcagga tgtgggaaaa caacatctct cctcaagcaa gctaagccgg attcggattt 2460 gttgttagct gccaaccgtg agactgcaaa tgacgcaaaa gccagcggcg ttattcctaa 2520 agcgcttgaa taccgagtga gaactgtgga ttcttacttg atgttgagaa cgtggttcac 2580 agccgagaga ttgctcgttg atgaatgttt cttggtccat gctggcttgg tctatgcagc 2640 tgccaccttg gcacgagtga aggaagtaat agcttttggt gatacaaagc agattccatt 2700 cgtgtctcgt ataccaactg tcaaactcag acacgcgtct gttgttggga cgttgaagcc 2760 aagaacaatt acctacagat gccctaggga cgtgacggca gtccttagtg agaaatttta 2820 tggtactaag gttaagacgt ttaatcttgt taaacagtct ttggaattga aaaacataga 2880 ttctagtacc gaaatacctg tagaaaagga tacgctatat atagcgcata cccaagctga 2940 taaacatgct ttgatgcgtt tacctgggat gaatggtata gaagtgttaa ctactcatga 3000 agcccaaggg aaaacaagag accatgtgat acttgtgcgt ttaagtaaaa ctaccaattt 3060 attatattcc gggaaaatgc ccgatgctgg tggttcgcac aatcttgttg gtctgtcccg 3120 gcataagaaa tctttgagat attttagtgt ctttgccgat gatccagacg atcaaattgc 3180 gactggaatt cgctggtcca aaacattgga tgagcaagag ttagcagctt atagagctgc 3240 tggttagtgt tttatttata aaacctggtt aagggtcctc cgggatgtgc tcagcaccta 3300 gcctaagcca agtccatatg cccacctatg ctgctccggg tggatgctta tacatgctat 3360 ggatgcctac atttgaaata atgtagatgc ctaatactct ctctcaggga gagagtttag 3420 atgcctccaa aggagatgc 3439 //