ID M58756; SV 1; linear; genomic RNA; STD; VRL; 2784 BP. XX AC M58756; XX DT 12-MAR-1991 (Rel. 27, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 5) XX DE Infectious pancreatic necrosis virus (Jasper serotype) VP1 gene, complete DE cds. XX KW GTP-binding protein; RNA-dependent RNA polymerase; viral protein 1; VP1. XX OS Infectious pancreatic necrosis virus OC Viruses; Riboviria; Birnaviridae; Aquabirnavirus. XX RN [1] RP 1-2784 RX DOI; 10.1016/0042-6822(91)90887-H. RX PUBMED; 1901682. RA Duncan R., Mason C.L., Nagy E., Leong J.-A., Dobos P.; RT "Sequence analysis of infectious pancreatic necrosis virus genome segment B RT and its encoded VP1 protein: a putative RNA-dependent RNA polymerase RT lacking the Gly-Asp-Asp motif"; RL Virology 181(2):541-552(1991). XX DR MD5; 1e3416a5f15e7cb198fecfb66ece0e17. DR EuropePMC; PMC110308; 9765436. DR EuropePMC; PMC140569; 12477876. DR EuropePMC; PMC348913; 14766589. DR EuropePMC; PMC4178629; 25128341. XX FH Key Location/Qualifiers FH FT source 1..2784 FT /organism="Infectious pancreatic necrosis virus" FT /strain="Jasper serotype" FT /mol_type="genomic RNA" FT /db_xref="taxon:11002" FT CDS 101..2638 FT /codon_start=1 FT /standard_name="VP1" FT /product="viral protein 1" FT /note="putative RNA-dependent RNA polymerase; putative" FT /db_xref="GOA:P22173" FT /db_xref="InterPro:IPR007098" FT /db_xref="InterPro:IPR007100" FT /db_xref="PDB:2YI8" FT /db_xref="PDB:2YI9" FT /db_xref="PDB:2YIA" FT /db_xref="PDB:2YIB" FT /db_xref="PDB:3ZED" FT /db_xref="UniProtKB/Swiss-Prot:P22173" FT /protein_id="AAA46243.1" FT /translation="MSDIFNSPQNKASILTALMKSTTGDVEDVLIPKRFRPAKDPLDSP FT QAAAQFLKDNKYRILRPRAIPTMVELETDAALPRLRQMVEDGKLKDTVSVPEGTTAFYP FT KYYPFHKPDHDEVGTFGAPDITLLKQLTFFLLENDFPTGPETLRQVREAIATLQYGSGS FT YSGQLNRLLAMKGVATGRNPNKTPKTVGYTNEQLAKLLEQTLPINTPKHEDPDLRWAPS FT WLINYTGDLSTDKSYLPHVTIKSSAGLPYIGKTKGDTTAEALVLADSFIRDLGRAATSA FT DPEAGVKKTITDFWYLSCGLLFPKGERYTQVDWDKKTRNIWSAPYPTHLLLSMVSTPVM FT NESKLNITNTQTPSLYGFSPFHGGMDRIMTIIRDSLDNDEDLVMIYADNIYILQDNTWY FT SIDLEKGEANCTPQHMQAMMYYLLTRGWTNEDGSPRYNPTWATFAMNVAPSMVVDSSCL FT LMNLQLKTYGQGSGNAFTFLNNHLMSTIVVAEWVKAGKPNPMTKEFMDLEEKTGINFKI FT ERELKNLRETIVEAVETAPQDGYLADGSDLPPIRPGKAVELDLLGWSAIYSRQMEMFVP FT VLENERLIASAAYPKGLENKALARKPGAEIAYQIVRYEAIRLVGGWNNPLLETAAKHMS FT LDKRKRLEVKGIDVTGFLDDWNNMSEFGGDLEGITLSEPLTNQTLVDINTPLDSFDPKA FT RPQTPRSPKKTLDEVTTAITSGTYKDPKSAVWRLLDQRTKLRVSTLRDQALALKPASSS FT VDNWAEATEELAQQQQLLMKANNLLKSSLTETREALETIQSDKIIAGKSNPEKNPGTAA FT NPVVGYGEFSEKIPLTPTQKKNAKRREKQRRNQ" XX SQ Sequence 2784 BP; 860 A; 813 C; 688 G; 423 T; 0 other; ggaaacagtg ggtcaacgtt ggtggcaccc gacataccac gactgtttac gtatgcacgc 60 aagtgccctt taacaaaacc ctatacacac aactcatgat atgtcggaca tcttcaactc 120 accacaaaac aaggcatcca tcttgactgc tctgatgaag agcacaacag gagacgtaga 180 ggacgtgctg ataccaaaac gcttcaggcc agccaaggac cccctcgaca gcccgcaagc 240 agcagcacag ttcctgaagg acaacaagta ccggatactt aggccgcgag ccatcccgac 300 catggtcgaa ctagagacag atgccgctct gcctcgactg cgacaaatgg tggaagacgg 360 caagcttaag gacacggtaa gcgtcccaga aggaaccact gcgttctacc caaagtacta 420 cccattccac aagccagacc atgacgaagt ggggacgttc ggggctccgg acatcacact 480 tctgaagcaa ctcaccttct tcctgttgga gaatgacttc ccaacaggac cggagacgct 540 cagacaagtc cgagaagcca tagccacact tcagtacggc tcaggcagct actcaggaca 600 gctgaacagg ctcctagcaa tgaagggcgt cgccactggc aggaatccaa acaagactcc 660 aaaaacagtg ggctacacga acgaacagct agcaaaactg ctggagcaaa cactaccgat 720 caacacacca aagcatgagg accccgacct ccggtgggcc ccaagctggc tgatcaacta 780 caccggagac ctgagcacag acaagtcata tctgccacat gtgaccataa agtcctcagc 840 cggcctacca tacataggca aaaccaaagg agacacgacg gcagaagcgc tcgtactggc 900 tgactccttc atacgtgacc tcggaagagc cgccacatca gcagacccag aagcaggtgt 960 gaagaaaacc atcaccgact tctggtacct gagctgtggg ctgctcttcc caaagggcga 1020 aagatacaca caagtggact gggacaagaa gaccagaaac atttggagcg cgccctaccc 1080 aacacaccta ctactatcaa tggtgtcaac cccggtgatg aacgagtcca aactcaacat 1140 caccaacacc cagaccccgt ctctgtacgg gttctcacca ttccacggag gaatggacag 1200 aatcatgaca atcataagag acagcctgga caatgacgag gacctagtca tgatctatgc 1260 ggacaacatc tacatactgc aggacaacac atggtactca attgacctgg agaaaggcga 1320 ggccaactgc actccacagc acatgcaggc catgatgtac tacctcctga cgaggggatg 1380 gacgaacgag gacggctcac cgcgatacaa cccgacatgg gccacattcg caatgaacgt 1440 cgctccatcc atggtggtgg actcatcgtg tcttttgatg aaccttcaac tgaagaccta 1500 cggccagggc agtgggaatg cctttacatt cctgaacaac cacctcatgt ccacaatagt 1560 cgtggccgag tgggtaaaag cagggaaacc aaaccccatg accaaagagt tcatggacct 1620 cgaggagaaa acgggcatca acttcaagat agagcgcgag ctgaaaaacc ttagagagac 1680 catcgttgag gccgtcgaga cggcacccca ggatggatac ctcgccgatg ggtccgacct 1740 accccccatc agaccaggaa aagcagtaga gcttgacctg ctcgggtggt cggccatcta 1800 cagccgccaa atggagatgt tcgttccagt cctcgagaac gagagactaa ttgcctcagc 1860 agcctaccca aaggggctcg agaacaaagc cctggccaga aaacccggag ccgagattgc 1920 gtaccagata gtgcggtacg aggcaatcag gctggtaggc ggctggaaca atccgctact 1980 agagaccgcg gccaaacaca tgtccctcga caagaggaag agactggaag tgaaggggat 2040 agacgtcacc ggattcctcg atgactggaa caacatgtcc gaattcggag gagacctaga 2100 aggaataacg ctatcagaac ccctaacaaa ccaaacactt gttgacatca acacgccgct 2160 ggacagcttt gaccccaagg caagacccca aacacccagg tctccaaaga agactctaga 2220 cgaggtgact acggccatca cctcgggcac atacaaggac cccaaaagcg ctgtgtggcg 2280 actgctagac cagaggacca aactccgagt cagcacacta cgagatcaag cactagcgct 2340 aaaacccgcg tcgtcctcgg tggacaactg ggccgaagcc actgaggaac tggcacaaca 2400 gcaacagcta ctcatgaagg ccaacaatct gctgaagagc agcctgacgg agacaagaga 2460 agcactggag accatccagt cagacaaaat catcgcaggg aaatccaacc ccgagaagaa 2520 cccggggacc gcagccaacc cagtcgttgg ctacggggaa ttcagtgaga agattcctct 2580 gacccccacg cagaaaaaga atgccaagcg gagggaaaag cagagaagaa accagtaaga 2640 agacccaaac cgggaagaat ccgaaatgaa tcagctggac tcatatgaaa gctccgcgcc 2700 gcacggcaag ctggacaaaa gtagtgaccc gacaacgtgc caccaacatg acccctgaaa 2760 acatccggtt ccgccaggga cccc 2784 //