ID M58152; SV 1; linear; genomic RNA; STD; VRL; 7555 BP. XX AC M58152; M31714; XX DT 01-AUG-1991 (Rel. 28, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 4) XX DE Apple chlorotic leaf spot virus, complete genome. XX KW coat protein. XX OS Apple chlorotic leaf spot virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Trichovirus. XX RN [1] RP 1-7555 RX DOI; 10.1016/0042-6822(90)90279-Z. RX PUBMED; 2219716. RA German S., Candresse T., Lanneau M., Huet J.C., Pernollet J.C., Dunez J.; RT "Nucleotide sequence and genomic organization of apple chlorotic leaf spot RT closterovirus"; RL Virology 179(1):104-112(1990). XX DR MD5; c3a44a6aaf6ce6e37986d867e25f5429. DR EuropePMC; PMC4982687; 27519059. XX FH Key Location/Qualifiers FH FT source 1..7555 FT /organism="Apple chlorotic leaf spot virus" FT /strain="P863" FT /mol_type="genomic RNA" FT /db_xref="taxon:12175" FT CDS 152..5806 FT /codon_start=1 FT /note="label:ORF_1" FT /note="putative" FT /db_xref="GOA:P27738" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR005123" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR008744" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR037151" FT /db_xref="UniProtKB/Swiss-Prot:P27738" FT /protein_id="AAA42587.1" FT /translation="MAFSYRTPQEELLSRLPQSQQEVISGFQYERIQKEEEKKVENFSF FT YLPEKTREWFTKSGVYLSPFAYVNHSHPGCKTLENHLLFNVVASYISKYSYVACLSIKS FT NKMSKMERLGPNSVKTYDILNRLVTAKDKARYGPLAKPERSPCPKKTNIFIHDEIHYWS FT RDQLETFLQVHRPKNLWATLVFPPEILAGYKSSVLPFLYQFEIHGKDLVYMPDGVRSES FT YTQPLENGFLLSSSSIIIKNRVTGVEIRYQVSLVYSLGSHHLFHIYPAEDLMKEEVRRF FT GPYDLFDVGSLFVKPVRVPIQDFPLSVFKKIFIYMSSLKKPDVQSAVAKLRQLSDADIS FT IESVFMIQEFASRIEKNGVESWSCSFWGCMKDWFFDKLPYREVLEKIGLADDFTRRLMK FT IKPLAFDIHTTDRPLTVRMIIDQIWEERLSSFDNISNIVFYGRREWLNNGVLPKVKKKG FT LAKLIPGREVDSHNYPREIYSDLLSSTSIWRSYDDDFRHRSASPLVILRSNRAYSEAAK FT FSSNCLSLCAAPCDEVIARTPFELNHRREKKELSLKCLDFHIKKMKVKNVLELEVKLRE FT RNTRISLSKKGVKKAGRSRMIPVHLLKPTCGEGNGKPEERNKEEAKIPMNEGTSKEEKG FT SEPPHSEVKREGVRLDEQHISEPLLSFKLDDFVGREKLCSAGLIKTVGNDYLLLARQIE FT CMPLSQLRGKKAAYFCLDFPMVYFHDKVSYPTFEATGEIRHVMMKARSKWGIDFNSALI FT QVYNDGCRLPLHSDNEECYDDDGILTINVVGDAKFHTTCHDEVIDLKQGNEILMPAGYQ FT KKNRHAVEVASEGRTSVTLRVHKRDFSFESKLRFIKGKFDCLFVSVAEIIHKKPEEIMM FT FIPHIMDRCVSNRGCSLDDAKAICEKYEIKIECEGDCGLVECGTSGLSIGRMLLRGNHF FT SVASVRRSSMDSLANSSKEIKSDGVLDHVTFNFHKRLKLVEPDLTNADIKVDSSRAGKL FT LKSLMDGMTGIVSHNSTHEGWRMIKGINSTSEMRSFMNMVRGQIEEPKSDLFDKVQELN FT FMKVKIYGIFGFAGSGKSHAIQNLIQTEFKGSQGIMVICPRRFLAKDWSEKGVDEKDIK FT TFESALKSDVKGKRLFILDEISLLPKGFTDLLMLKMHMEGILKKSTIVCIGDPLQAGYF FT CPKDDNYLSREGEIKRLFKGGVNYKWYSYRINKFIAKKLAIETMNDFIGIDEQSSIYKD FT MPSAHHFMEKKGNHIEVILVASMVEKELYSNYGNVMTFGESQGLTFNCGVIVLSEEAKL FT CSDAHIMVAITRFRRGFCFALGSKGSKEDYMRSMKSGLLQRICSGVGASKEFILGSSSV FT NLILSEKDIAKGAGIDEMDREARLEGDVWLKSMIYLGKRYHMVEPLGQVIKLTDDAIKC FT HIPVCSSQTLGPELDNIQAREYREFKGKNGWSNQFREEAGPNWKFPYKVNQAMSYEAVY FT PRHKMDDDLTFLAAIKKRLRFDNVANNYAKFKAAESRGKYLTKIFLKHVPIKCGRDQRL FT LDQCRQEFEETKLSKSAATIGAHSQRSDSDWPLDKIFLFMKSQLCTKFEKRFTEAKAGQ FT TLACFPHKILVEFSPWCRYTEKVLTANLPDNYYIHQRKNFSELEDFARRFSNGSICVES FT DYTAFDVSQDHTILAFEVELLRHFGWDDRVLQSYIKMKCTLGCRLGGFAIMRFTGEFST FT FLFNTLANMVFTFCRYEVPDGTPICFAGDDMCALRNLREIDTHEFILSKLSLKAKVNRT FT KVPMFCGWRLCCDGLIKEPCLIYERLQVAIENGRLMDVIDSYFLEFSFAYKLGERLYSH FT LEIEQLNYHQVLTRFFIRNKHLLRGDSRHNISELEWLSDEDGDNDKGSQIEDRRRGYSN FT CWGEKLQNLF" FT CDS 5718..7100 FT /codon_start=1 FT /note="label:ORF_2" FT /note="putative" FT /db_xref="GOA:P27739" FT /db_xref="InterPro:IPR001815" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/Swiss-Prot:P27739" FT /protein_id="AAA42588.1" FT /translation="MATMIRGHRLRIAEGDIPIAGVKSSRIYSDISPFKKASDLMIHWN FT EFVFKVMPEDIAGDGFRLASIPVIPSSEVQAVLRKRESTNYVHWGALSISIDALFRKNA FT GVSGWCYVYDNRWETFEQAMLQKFHFNLDSGSATLVTSPNFPVSLDDPGLSNSISVAVM FT FENLNFKFESYPISVRVGNMCRFFDSFLSSVKNKVDSNFLLEASNADPLGVGAFGFEQD FT DQVSELFNYIQTVPTQAIKFREHEIPKGFLGMMGKKKIKSFEFASGSKGMERRKPNRGK FT QIDRSFSQRAVPGFRSQNEKVEHQGLSTDSDFENFLRNKRGNKAGVKSTASEGSSVDNI FT SSREFQFARQNQAKEDGSSSEFAAQGGRKSKGISGRRKQTSSWKDRGNPGTDTGVHLRE FT HSDPGNVRADGVSGPSGGSEINGGSISPRVLQPEGSGQLDQSFQDYLFGPEHQQNDIPS FT GL" FT CDS 6784..7365 FT /codon_start=1 FT /product="coat protein" FT /note="label:ORF_3" FT /db_xref="GOA:P27737" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/Swiss-Prot:P27737" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAA42589.1" FT /translation="MAAVLNLQLKVDASLKAFLGAENRPLHGKTGATLEQILESIFANI FT AIQGTSEQTEFLDLVVEVKSMEDQSVLGSYNLKEVVNLIKAFKTTSSDPNINKMTFRQV FT CEAFAPEARNGLVKLKYKGVFTNLFTTMPEVGSKYPELMFDFNKGLNMFIMNKAQQKVI FT TNMNRRLLQTEFAKSENEAKLSSVSTDLCI" XX SQ Sequence 7555 BP; 2384 A; 1334 C; 1802 G; 2035 T; 0 other; tgatactgat acagtgtaca ctcacgacgt gagtaaacag attgacgtaa cgcctcaatc 60 gtggtcaagg accagcattt caatgctatc acattaaata caatcacgtt gtattacaaa 120 actttccgtt taattacgtg aaaggttaca aatggccttc tcttacagaa cgccacagga 180 ggaacttctg agcagactac cacagtccca acaggaggtg atcagcggat ttcagtacga 240 acgcattcaa aaggaggaag agaagaaggt ggaaaacttc tctttttacc taccagagaa 300 aaccagggag tggtttacta agtcaggtgt ctatctttcg cctttcgctt atgttaatca 360 ttctcaccct ggttgtaaaa ctctggagaa ccacctttta tttaatgttg tagctagtta 420 tattagtaag tactcctatg tagcttgtct tagtattaaa tctaataaaa tgagcaaaat 480 ggaacgattg ggtcctaatt ctgttaaaac atatgatatt ttgaacagac tggtgaccgc 540 taaggataaa gctcgctatg gccctttggc caaaccggag aggtctccat gcccaaagaa 600 aactaacatt ttcattcatg atgagattca ctattggtca agggatcaac ttgagacttt 660 cctccaagtc cacaggccaa agaatttgtg ggcaactttg gttttccctc cagagatact 720 tgctggttac aaatcgtctg ttttaccatt cctttatcag tttgaaattc atgggaaaga 780 cttggtttat atgcctgatg gagtaagatc tgaaagttac acacagcctc ttgagaatgg 840 ttttttacta agctccagca gcataatcat caaaaacaga gtcacggggg ttgaaatcag 900 gtaccaagtt agtcttgtat attctctggg gtctcaccat ctgtttcata tttacccagc 960 tgaggatcta atgaaagaag aggttaggag atttgggcct tacgaccttt ttgatgtggg 1020 ttcacttttt gtgaaaccag tgcgcgttcc cattcaagat tttccactta gcgtatttaa 1080 gaaaatcttc atctacatga gctcactaaa gaaacctgat gtacaatcag cagtggcaaa 1140 gttgaggcag ttgtctgatg ccgacatttc catagaaagt gtgttcatga ttcaggagtt 1200 tgcaagtagg atagagaaga acggtgtgga gagttggtcc tgctcattct ggggatgcat 1260 gaaggattgg ttctttgaca agttaccata tagggaggtg ttggaaaaaa tagggttggc 1320 tgatgatttc accaggaggt tgatgaagat taaaccatta gcctttgaca ttcacacaac 1380 tgacaggcca ttgacagtca gaatgattat agatcagatc tgggaagaga ggctgagctc 1440 attcgacaac atttcaaata ttgtcttcta tgggagaaga gaatggctca acaatggagt 1500 tttaccaaaa gtaaaaaaaa aaggtttggc caaattgatt cccggaaggg aagttgattc 1560 acacaactac ccaagagaga tatattctga tttgctgtca tccacgtcga tttggaggtc 1620 atatgatgat gacttcagac acaggagtgc tagcccttta gtgatcttga ggtccaatag 1680 agcttactct gaagcagcaa aattcagctc aaattgtctg agtttgtgtg cagcaccctg 1740 tgatgaagtc attgcaagaa ccccttttga attgaatcac agaagagaga agaaggagct 1800 atccctcaaa tgcctggatt ttcatatcaa gaaaatgaag gtgaaaaacg tgctcgagct 1860 tgaggtcaag ctcagagaac gcaacaccag aatttctttg agcaaaaagg gagttaagaa 1920 agcagggaga tcaaggatga ttccagtgca tctgcttaaa ccaacctgcg gtgaaggaaa 1980 tggcaaacct gaagagagga ataaggagga agcaaagatt ccaatgaatg aagggacaag 2040 caaagaagaa aaggggtccg aacctccaca ttctgaagtt aaaagggaag gtgttagatt 2100 ggatgagcaa cacatttcag aacccctttt gagttttaaa ttagacgact tcgtcggaag 2160 ggagaaactt tgttctgctg gtttaatcaa aactgttgga aacgattatc tcttgttagc 2220 cagacaaatt gaatgtatgc cactttctca actcagagga aagaaagcag catacttctg 2280 tcttgacttt ccaatggtgt attttcatga taaagtttct tacccaacat ttgaggcaac 2340 tggggaaatc agacatgtca tgatgaaagc aagaagcaaa tgggggattg atttcaacag 2400 cgcactaatt caagtttata atgatggatg caggttacct ttgcacagtg ataatgagga 2460 gtgttatgac gatgacggga tcctcaccat taacgtcgtg ggagatgcaa agtttcacac 2520 cacctgccat gatgaggtca tagatcttaa acaagggaat gagatattga tgcctgcagg 2580 ttaccaaaag aaaaatagac atgctgtgga ggtcgcttca gaaggaagga caagtgttac 2640 cctcagggtt cacaaaaggg atttcagttt tgagtcaaag cttagattca tcaagggtaa 2700 attcgactgc ctatttgtca gtgtggctga aataatacac aaaaaaccag aggaaatcat 2760 gatgttcatc ccacacatta tggacaggtg tgtgagtaat aggggttgct cacttgatga 2820 tgcaaaagca atatgtgaaa aatatgaaat caaaatagag tgcgaaggcg attgcggctt 2880 ggttgagtgt gggacatcag gtctttccat tggaaggatg ctgcttaggg gaaaccactt 2940 ttctgtcgct tcagttagga ggtcatctat ggattcgctt gctaactcat caaaggagat 3000 caagtcagat ggagtcttag atcacgtaac attcaacttc cacaaaagac tcaaacttgt 3060 tgaacctgat ttgaccaatg cagacatcaa agtggattct tcaagggcag gaaagctgct 3120 caaaagtctg atggatggca tgactggaat tgtttctcac aattcaaccc atgaagggtg 3180 gaggatgatc aaagggataa acagcacctc tgagatgaga tcgttcatga atatggtgag 3240 gggtcaaatt gaagagccca aaagtgatct gtttgacaag gttcaagaac tgaactttat 3300 gaaggtgaag atttatggca ttttcggatt tgctggatca ggaaaaagtc atgcaattca 3360 gaatttaata caaactgaat tcaaaggttc acaagggatt atggtgatct gccccagaag 3420 atttttggca aaagattgga gcgaaaaagg agtggacgaa aaggacatta aaacttttga 3480 gagtgcatta aagtcagatg tcaaaggaaa gagattattt atactggatg aaatcagttt 3540 gctccctaaa ggtttcactg atcttttgat gcttaagatg catatggaag gaatccttaa 3600 aaagtcaaca attgtttgta taggggaccc gctccaggct ggatactttt gtcctaagga 3660 tgacaactac ttgtctaggg aaggagaaat taaacggctt ttcaaaggag gggtaaacta 3720 caaatggtac agttacagaa ttaacaaatt cattgcaaaa aaactggcca tagaaacaat 3780 gaatgacttc attggaatag atgaacaaag ttcgatctac aaagatatgc cgtcagctca 3840 ccacttcatg gaaaagaaag ggaatcatat agaggtcatc ttggttgcca gtatggtgga 3900 aaaggaactt tactccaact atgggaatgt gatgacattt ggggagtcac aaggtttaac 3960 attcaattgt ggagtaatag tactttccga ggaggccaag ctgtgttccg atgcgcatat 4020 aatggttgca atcacaaggt tcagaagagg cttctgcttt gcgttgggga gcaaagggtc 4080 aaaagaagat tatatgaggt caatgaagag cggtctgctt caaagaatat gttcgggcgt 4140 tggtgcttca aaagaattca ttttggggtc ctcctccgtc aacttgattt tgagtgagaa 4200 agacatcgcc aaaggagcag ggattgatga gatggataga gaagctagac tggaaggaga 4260 tgtctggctc aagagtatga tataccttgg aaaaagatat cacatggttg aaccacttgg 4320 tcaagtgatt aagctaactg atgatgcaat taaatgccac attccggttt gttcaagtca 4380 gacactaggt cctgagctcg ataacatcca agcaagagaa tacagagaat ttaaaggaaa 4440 aaatgggtgg tcgaatcagt tcagagaaga agctgggcca aattggaaat tcccttacaa 4500 ggtcaatcaa gcgatgagtt atgaggctgt gtatcccaga cacaaaatgg atgatgatct 4560 cactttcctt gctgccataa agaagaggct tcgctttgac aacgttgcca acaattacgc 4620 aaaattcaag gcagcagaga gcagagggaa gtatctgaca aaaatctttc tcaaacatgt 4680 gcccatcaaa tgtggcaggg accaaaggct cctggatcaa tgcaggcaag aatttgagga 4740 gacgaaacta tctaaaagtg cggccacaat tggagcacac tctcagaggt cagactcgga 4800 ttggcccttg gataagattt tcctgttcat gaaatcgcaa ctttgcacaa aattcgaaaa 4860 aagatttaca gaagctaagg caggccagac tttggcttgt tttccacaca aaattctcgt 4920 ggaatttagc ccatggtgtc gatacacaga aaaggtgctc actgcaaact taccggataa 4980 ttactacatt catcaaagga aaaatttcag tgaattggag gattttgcca gaagattttc 5040 aaatggttca atatgtgtgg aatcagatta tacagctttt gacgtttcac aagatcacac 5100 cattttagca tttgaggtgg aattgctcag acattttggt tgggacgaca gagtccttca 5160 gagttacatt aagatgaagt gtactttggg ttgcagactt ggaggttttg ctataatgag 5220 gttcactggg gaattttcaa cctttctgtt caatacgctt gcaaacatgg ttttcacatt 5280 ttgcagatac gaggttcctg atggaacccc aatctgcttc gccggtgatg acatgtgcgc 5340 tctgagaaac ttgagggaga ttgacaccca tgaattcatc ttgagcaagc tgagtttgaa 5400 ggccaaggtt aacagaacaa aagtgccaat gttttgtgga tggcgattgt gctgcgatgg 5460 tttgatcaaa gaaccttgct taatctatga aaggctgcag gtggcaattg agaatgggag 5520 attgatggat gtgatagact catattttct ggagttttca ttcgcctaca aattaggtga 5580 gaggctctat tcacatcttg aaattgaaca actgaattat catcaggttt taacaagatt 5640 cttcataagg aataaacatc tactcagagg ggattcaagg cataacattt ctgaacttga 5700 gtggttgtct gacgaagatg gcgacaatga taaggggtca cagattgagg atcgcagaag 5760 gggatattcc aattgctggg gtgaaaagct ccagaattta ttctgacatt agccccttca 5820 aaaaggcgtc tgaccttatg atccattgga atgaattcgt tttcaaggtc atgcctgaag 5880 acatagcagg ggatggtttc agattggcgt cgatacctgt gataccctcg tctgaagtgc 5940 aagcagtttt aaggaaaaga gaaagtacaa attatgtgca ctggggggca ctgtccatat 6000 caattgatgc attgttcagg aagaatgcag gggtgtcagg ttggtgttac gtttatgata 6060 acaggtggga gacatttgag caggccatgc tgcagaagtt tcatttcaat ctggatagtg 6120 gttccgccac cttggtgact tcaccaaact ttccagtttc actggatgac cctggcttgt 6180 caaactcaat tagtgtggca gtgatgttcg agaacctcaa ctttaagttt gagagctacc 6240 caattagtgt gagagttgga aatatgtgca ggttctttga tagcttcttg agcagtgtta 6300 agaataaagt tgactcaaat tttttgcttg aagcttcgaa tgcagatccg ctgggagtgg 6360 gtgcttttgg atttgagcaa gatgaccaag ttagtgaact tttcaattac attcaaacgg 6420 tcccaactca agccatcaaa ttcagagagc atgagatacc taaagggttt ttgggtatga 6480 tgggaaagaa aaagatcaaa tcttttgagt ttgcctcagg ttcaaagggt atggagagaa 6540 ggaaaccaaa tagaggaaag caaattgaca gatcattcag ccaaagggct gtccctggat 6600 ttaggtccca gaatgagaag gttgaacatc aaggcttatc aacagacagc gatttcgaga 6660 attttctcag aaacaagagg ggtaataaag ctggagttaa atccactgct tcagaagggt 6720 catcagttga taacatttct tcaagagaat ttcagtttgc tcgacagaac caggcgaagg 6780 aggatggcag cagttctgaa tttgcagctc aaggtggacg caagtctaaa ggcatttctg 6840 ggcgcagaaa acagacctct tcatggaaag acaggggcaa ccctggaaca gatactggag 6900 tccatcttcg cgaacatagc gatccaggga acgtcagagc agacggagtt tctggaccta 6960 gtggtggaag tgaaatcaat ggaggatcaa tcagtcctcg ggtcttacaa cctgaaggaa 7020 gtggtcaact tgatcaaagc tttcaagact acctcttcgg acccgaacat caacaaaatg 7080 acattccgtc aggtctgtga agctttcgca ccagaggcaa gaaatggact ggtcaaattg 7140 aaatacaaag gggtttttac aaacctcttt acaactatgc cggaagtggg gagcaagtac 7200 ccggagctaa tgtttgattt caataagggt ctgaatatgt tcatcatgaa caaggcccag 7260 cagaaagtta taaccaatat gaatcggcgt cttttacaga ctgaattcgc aaagagcgag 7320 aacgaggcaa agctctcgtc tgtgtcgact gatctttgca tttagtctgt tcaggaagtt 7380 tggttcaata aataaaataa acaaatagtg tgttgtgtgc tcaagtgtgt ttactttaag 7440 catgtttacg caaataaact cttgaaccca tgaaagagta taaagagtca tggtatttaa 7500 ttggagtgtt tagacttata ataaatagcc tgtagacttt taaatatttt actac 7555 //