ID L04281; SV 2; linear; genomic RNA; STD; VRL; 2844 BP. XX AC L04281; XX DT 14-OCT-1992 (Rel. 33, Created) DT 10-DEC-2019 (Rel. 143, Last updated, Version 5) XX DE Beet western yellows ST9 associated virus P1a-P1b and P1a genes, complete DE cds. XX KW . XX OS Beet western yellows ST9 associated virus OC Viruses; Riboviria; unclassified Riboviria; unclassified ssRNA viruses; OC unclassified ssRNA positive-strand viruses. XX RN [1] RP 1-2844 RX DOI; 10.1006/viro.1993.1063. RX PUBMED; 8421895. RA Chin L.S., Foster J.L., Falk B.W.; RT "The beet western yellows virus ST9-associated RNA shares structural and RT nucleotide sequence homology with carmo-like viruses"; RL Virology 192(2):473-482(1993). XX RN [2] RP 1-2844 RA Chin L.-S.; RT ; RL Submitted (11-JUN-1993) to the INSDC. RL Department of Plant Pathology, University of California, Davis, CA 95616, RL USA XX DR MD5; 3fcbabffc72444b3fdb7537062f7f711. XX CC On Dec 6, 2019 this sequence version replaced L04281.1. XX FH Key Location/Qualifiers FH FT source 1..2844 FT /organism="Beet western yellows ST9 associated virus" FT /strain="ST9" FT /mol_type="genomic RNA" FT /db_xref="taxon:198589" FT 5'UTR <1..31 FT CDS 32..2212 FT /codon_start=1 FT /transl_except=(pos:629..631,aa:OTHER) FT /product="P1a-P1b" FT /note="ORF1a and ORF1b; translated by read through of ORF1a FT stop codon; RNA-dependent RNA polymerase" FT /protein_id="QGT49445.1" FT /translation="MSSHLLSSSFSLLKALSSVGLPSVNTIKYSILGASIVAAGTLGSI FT EYLRYRLGRSDAAHLVEDSIDSIETVLEVDDPDVELWESSLPSDPRERATLVLKGKKKL FT SRRVRPSRTQSFIRVLRAEVKAEMGTPAYNAANVAVIRHMVDRYCRERNIRKTSYAHLL FT ADVVAAVFVPYKAEYRQAAASGSLANRLRRWFVEVKXGGLQIVGGYEHDHTSLEGIPGL FT DPTNLRPRPRHTNPSFRRIVAPSFRYDVTYYTNNSNNLIKGLVNRVLTYKGGPILAPSP FT GAWRSLSVIARRVGSWSRTSPMSPDEFLACYAGRKKTIYAKAVSSLAETPLNIRDFRVR FT AFIKKEKDKLLSSNSDPRIIQPRHPRFLVSLGRYIRPLEQIVYKSLTRLFKRFTVSDTP FT VCFKGLNYLRRGNYMKEKWESFNDPVAICLDASRFDLHVSEDALQHTHLLYTTAIGNDP FT QLAYILENRLVTDGVGWSSDGAFRYHKKGGRCSGDNDTSLGNVIIMLSITYAFCEESEI FT PHIEITNDGDDQVIMVEREHMHTVLQIEDTFRKFGFLLKVEDPVYELERIDFCQTRPVQ FT LTPDVCTMVRHPRLAMTKDLTTFIPIERGRLKYHMLTAIGKCGSACYDDIPVLRAMYRK FT MEIIGTRNKGDERRWWNSTHADPAFRTLSSKAATNVGLTTQCRISFWKAFGILPDQQEA FT LENEWRKWEPSLNRVEFVHSFLGDYPVCEGDV" FT CDS 32..631 FT /codon_start=1 FT /product="P1a" FT /note="ORF1a; putative 25K replicase" FT /protein_id="QGT49444.1" FT /translation="MSSHLLSSSFSLLKALSSVGLPSVNTIKYSILGASIVAAGTLGSI FT EYLRYRLGRSDAAHLVEDSIDSIETVLEVDDPDVELWESSLPSDPRERATLVLKGKKKL FT SRRVRPSRTQSFIRVLRAEVKAEMGTPAYNAANVAVIRHMVDRYCRERNIRKTSYAHLL FT ADVVAAVFVPYKAEYRQAAASGSLANRLRRWFVEVK" FT 3'UTR 2213..>2844 XX SQ Sequence 2844 BP; 789 A; 692 C; 728 G; 635 T; 0 other; gggatttatg aactgagcaa cccagattga aatgtctagc catctgttga gctccagttt 60 ctccctcctc aaagccctaa gtagtgtggg gctcccttct gtaaatacca tcaaatatag 120 tatactagga gcatctatag tagctgccgg aacgctaggt tccattgagt atcttaggta 180 taggttaggt agatcagatg cggcgcatct ggttgaggat agtatagata gtatagaaac 240 tgtgctggag gtagacgacc ccgatgtaga attgtgggag tccagtctac cttccgatcc 300 cagagagaga gcaaccctgg tcctgaaggg taaaaagaag ctttcccggc gtgtgagacc 360 gagcagaact caatcgttca taagagttct ccgagccgag gtgaaagccg agatgggcac 420 ccctgcctac aacgctgcaa atgtggccgt catacggcac atggttgaca gatactgcag 480 ggagcgcaac ataaggaaaa catcctatgc ccatctcctt gctgacgtgg tagccgcggt 540 ctttgttcca tacaaggccg aatataggca ggctgccgcc tctgggagct tggcgaaccg 600 cctacggagg tggttcgtcg aagttaaata gggcggccta cagatagtgg gggggtatga 660 acacgatcac accagcctag agggcatacc cggcctggac cccacgaatc tgaggccgag 720 accccggcac actaacccta gttttagacg catagtagct ccatcattta gatatgatgt 780 tacttattac actaacaata gtaataattt aatcaagggt cttgtcaata gggtattgac 840 atataagggt ggaccgatac ttgcccctag tccgggggca tggcggagcc tatcagtaat 900 tgcaagacga gttggaagtt ggtcgaggac ctccccgatg agcccagatg aatttctggc 960 gtgctacgcg ggacgtaaga agaccatata cgccaaggca gtctcgtcac tagctgaaac 1020 ccccttgaat attagggatt ttcgtgtgag ggccttcatc aagaaggaga aggacaaact 1080 cctatcgtcg aatagcgacc ctcgcataat tcagcctaga caccctaggt tcttagttag 1140 cttaggtaga tacatcagac ctcttgaaca gatagtctat aaatcgctca cgcgactgtt 1200 caagcgattc acagtctcag acaccccagt gtgcttcaaa ggcctcaatt acctcagaag 1260 gggcaactac atgaaagaaa agtgggagag ttttaacgac cccgtggcga tctgtcttga 1320 cgctagccgt tttgatctcc acgtatctga agatgcactc cagcataccc acttactgta 1380 tacgactgcg atcggaaacg acccccaact cgcctacatt ctggagaacc gtctcgtcac 1440 agacggagta ggatggagtt cagatggggc tttcaggtac cacaagaagg gcggaagatg 1500 ctccggcgac aacgacacat cgctcggaaa tgtgataatc atgctatcca ttacatatgc 1560 cttctgtgaa gagagtgaga ttccacacat tgagatcacc aacgacggag atgatcaggt 1620 gataatggtg gagagagagc acatgcacac agtcctgcag atagaggaca cattccgaaa 1680 attcggattc ctgctcaagg tagaggaccc ggtttacgag ctcgaacgta ttgacttttg 1740 tcaaacgaga ccggtccagc tcactcctga tgtatgcacg atggtaagac atcccagatt 1800 agcaatgacc aaagatctta cgacctttat cccaattgaa cgtggaagac tgaaatacca 1860 tatgctcaca gcgattggaa aatgcgggtc agcatgttac gatgacatcc ccgttttaag 1920 agctatgtac agaaaaatgg aaatcattgg gacaagaaat aaaggcgacg agaggagatg 1980 gtggaacagt acccacgcgg atccggcttt ccggacactg tcgagtaaag cggcaacaaa 2040 cgtagggttg accacacaat gccgaatcag cttttggaaa gcattcggaa ttctcccaga 2100 tcaacaggag gccctcgaga acgagtggag gaaatgggaa ccatcgctga atagagtaga 2160 atttgtacat agttttctag gtgactatcc agtgtgtgaa ggtgatgttt aatacactac 2220 atgcgtcttg gcttacgtga gccaatgccg cgacctctgc ccttaggagt tcagaaaagc 2280 tgataccaag tcattggatc aagggaccac ctcactagga agaatgaaac tgtcaccatt 2340 tgtataatat ttctagttag gatagagtca taacaacaag taccctccaa gccctacagg 2400 ttggaagagg gggctatcag tcctgtaggc agactcgcgt ctcctggcgc caccccactc 2460 gaactcttgg gtggacatcg ccagtctcgt atacaccggg gagagagacg acacccaact 2520 aggggggcca atggcctagt ggttactgga agcctaatcc agacgtgcac cacacgacat 2580 atggtagatc gcacgcggca ttacacctgc tgtgcatccg gtcagaatcc aacgacccgg 2640 cagccaactc ctcacgatct ccgcggatcg tgactaacac ccacttggga tttttactca 2700 gtttacgcac tgagactggc ttgcagctct ggatgagggt tactgatcgc gtctaggcac 2760 accctgccta gtagcagggg ggcgaaagtg cactagattc aggccgagag gcactgtttg 2820 tttacaatac caggtcaacc gccc 2844 //