ID KC706607; SV 1; circular; genomic DNA; STD; VRL; 2707 BP. XX AC KC706607; XX DT 24-MAR-2013 (Rel. 116, Created) DT 12-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Tomato mild mosaic virus isolate BR:Vic17.2:10 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato mild mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2707 RX DOI; 10.1128/JVI.00155-13. RX PUBMED; 23487451. RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T., Silva F.N., Xavier C.A., RA Hora-Junior B.T., Beserra-Junior J.E., Malta A.W., Martin D.P., Varsani A., RA Alfenas-Zerbini P., Mizubuti E.S., Zerbini F.M.; RT "Brazilian begomovirus populations are highly recombinant, rapidly RT evolving, and segregated based on geographical location"; RL J. Virol. 87(10):5784-5799(2013). XX RN [2] RP 1-2707 RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T.M., Silva F.N., Xavier C.A.D., RA Hora-Junior B.T., Beserra-Junior J.E.A., Malta A.W.O., Martin D.P., RA Varsani A., Alfenas-Zerbini P., Mizubuti E.S.G., Zerbini F.M.; RT ; RL Submitted (15-FEB-2013) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, MG 36570-000, Brazil XX DR MD5; f5c1b87d9e7f0e57d45d88d002f2eeee. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAman v. 7 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2707 FT /organism="Tomato mild mosaic virus" FT /segment="DNA-A" FT /host="Sida urens" FT /isolate="BR:Vic17.2:10" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2010" FT /db_xref="taxon:536086" FT CDS 301..1050 FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:B3GNB1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B3GNB1" FT /protein_id="AGH29900.1" FT /translation="MPKRDAPWRLMAGTSKVSRSVNYSPRGGPKFNKASEWVNRPMYRK FT PRIYRTLRSPDVPKGCEGPCKVQSFEARHDVSHVGKVICVSDVTRGNGITHRVGKRFCV FT KSVYILGKIWMDEAIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNLFDNEPSTATVKS FT DLRDRFQVMRKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAAKYENHTENAMLL FT YMACTHASNPVYASLKIRIYFYDSVLN" FT CDS complement(1047..1445) FT /codon_start=1 FT /product="replication-enhancer protein" FT /note="REN" FT /db_xref="GOA:M4QWS8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4QWS8" FT /protein_id="AGH29901.1" FT /translation="MDSRTGESITAPQAENGVYIWEISNPLYFKIYNVEDLRYTATRVY FT HVQIRFNHNLRRMLGLHKAFLNFQVWTTSVRASGTTYLHRFRQLVMLYLDQLGVISLNN FT VIRAVRFATNKPYVNYVLENHSIKFKFY" FT CDS complement(1192..1581) FT /codon_start=1 FT /product="transactivating protein" FT /note="TRAP" FT /db_xref="GOA:M4QNN9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4QNN9" FT /protein_id="AGH29903.1" FT /translation="MLNSSSSTPPSIKPKHRIAKKRATRRRRIDLDCGCSVFVHLNCAG FT HGFTHRGEHHCTSGREWRIYLGDIKSPLFQDIQRRGSTVHGDQGVPRPDTVQPQPQEDA FT GSTQGLPELPSLDDISSSFWDDIFT" FT CDS complement(1493..2578) FT /codon_start=1 FT /product="replication-associated protein" FT /note="REP" FT /db_xref="GOA:M4QM49" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4QM49" FT /protein_id="AGH29902.1" FT /translation="MPPPKRFRINAKNYFLTYPKCSLTKEEALSQLLALEIPSQKKFIK FT VARELHDDGEPHLHVLIQFEGKFQCTNNRFFDLVSPTRSAHFHPNVQGAKSSSDVKSYV FT DKDGDTVEWGIFQVDGRSARGGCQTANDAAAEALNAPSKEAALAIIREKLPEKYLFQFH FT NLNSNLDRIFAKAPETWSPPFPLSSFTHVPDEMQEWADDYFGRDAAARPIRPVSLIVEG FT DSRTGKTMWARALGAHNYLSGHLDFNSRVYSNEAEYNVIDDVPPHYLKLKHWKELMGAQ FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLEKEENLALKNWTIKNVKFIFLD FT APLYQTQAQDCEEEGYQTTQN" FT CDS complement(2164..2421) FT /codon_start=1 FT /product="AC4 protein" FT /note="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B3GNB5" FT /protein_id="AGH29899.1" FT /translation="MGSLISTSSSSSKGNSSARIIDSSTLSPQPGQHISIRTFRGLSRR FT PTSSPMSTRTEIQSNGEFSRSTEEVLEEVARQLTTLPQRP" XX SQ Sequence 2707 BP; 656 A; 634 C; 669 G; 748 T; 0 other; accagatggc cgcgattttt tgcacaccta cgtggcgctc tggaggacgg gcgatctccc 60 ctaggttgcc ccccccagcc acccctgtcg ggcgctcaat tcgttgagcg cttttttgga 120 gtccgcgaaa tgggttcagc gcattttttg agttccgccg tttaacttta atttaaatta 180 aagccttgac caatcatttc gcgtctgacg agtttattta gcctaagaga acttaacaac 240 gaagttgttg accaaccgtt ataaattaac tttgatggga ctcgtcagtt ttaactcaga 300 atgccgaagc gggacgcccc atggcgcctg atggcgggaa cctcaaaggt tagccgttct 360 gtcaactatt cccctcgtgg aggcccaaag ttcaacaagg catctgagtg ggtcaacagg 420 cccatgtata gaaagcccag gatatatcgg acgctcagat cacctgacgt ccctaaggga 480 tgtgaagggc cttgtaaggt ccagtcgttc gaggcgcgac atgatgtctc tcatgtcggg 540 aaggtcatat gcgtctctga cgttacacgt ggtaatggta ttacccatcg tgtgggtaag 600 cgtttttgtg tcaagtccgt gtacatatta gggaagatct ggatggatga agcgatcaag 660 ctcaagaacc acacgaacag cgtcatgttc tggttagtca gagacaggag accctacggc 720 acccctatgg attttggaca ggtgttcaac ctgttcgaca acgagcccag cactgccact 780 gttaagagcg atctccgtga tcgcttccaa gtgatgcgca agttttacgc caaggtcaca 840 ggtggacagt atgctagcaa cgagcaggct ttggtcaagc gtttctggaa ggtcaacaat 900 catgtggtct acaaccatca agaggctgcg aagtacgaga accacacgga gaacgctatg 960 ttattgtata tggcatgtac ccatgcctct aaccctgtgt atgcgagtct gaagattcga 1020 atctacttct acgattcggt tctcaattaa taaaatttaa attttattga atgattttcc 1080 agtacatagt ttacatatgg tttgtttgtt gcaaaccgaa cagccctaat gacattatta 1140 agggagatca cacctaattg atcgagatac aacataacta actgcctaaa cctatgtaaa 1200 tatgtcgtcc cagaagctcg aactgatgtc gtccagactt ggaagttcag gaaggccttg 1260 tgtagaccca gcatcctcct gaggttgtgg ttgaaccgta tctggacgtg gtacaccctg 1320 gtcgccgtgt accgtagatc ctctacgttg tatatcttga aatagagggg atttgatatc 1380 tcccagatat atacgccatt ctctgcctga ggtgcagtga tgctctcccc ggtgcgtgaa 1440 tccatgccct gcgcagttaa ggtgcacgaa gaccgagcac ccgcagtcta ggtcaattct 1500 gcgtcgtctg gtagccctct tcttcgcaat cctgtgcttg ggtttgatag aggggggcgt 1560 cgaggaagat gaatttaaca ttcttgatcg tccagttctt cagagcaagg ttttcctctt 1620 tctcgaggaa atctttatag ctggccccct ctccaggatt gcagagcacg attgatggga 1680 taccgccttt aatttgaaca ggctttccgt atttgcaatt tgactgccag tccttttgag 1740 ctcccatcaa ttctttccag tgctttagct ttaggtagtg cggagggacg tcatcaatga 1800 cgttatattc agcctcattt gaatagaccc tggagttgaa gtccaggtgt ccactgagat 1860 agttatgggc ccctaaagca cgagcccaca ttgtcttgcc tgttcgacta tctccttcga 1920 ctatcaaact aacaggcctg atgggccgcg cagcggcatc tcttccaaaa tagtcatcgg 1980 cccactcttg catctcgtcg ggaacgtgag tgaatgagga gagtggaaac ggaggagacc 2040 aagtttccgg agcctttgcg aaaatgcgat ctaaattact atttagatta tggaattgga 2100 agagatactt ttccggcaac ttctctctga taatggccag cgccgcttct ttcgacggcg 2160 cgtttaaggc ctctgcggca gcgtcgttag ctgtctggca acctcctcta gcacttcttc 2220 cgtcgacctg gaaaattccc cattcgactg tatctccgtc cttgtcgaca taggacttga 2280 cgtcggacga cgacttagcc ccctgaacgt tcggatggaa atgtgctgac ctggttgggg 2340 agacaaggtc gaagaatcta ttattcgtgc actggaattt cccttcgaac tggatgagga 2400 cgtggagatg aggctcccca tcgtcgtgga gctctctagc taccttgata aatttcttct 2460 gtgaaggaat ttctagggct aataattggg aaagtgcctc ttctttggtt aggctgcatt 2520 tggggtatgt caagaaatag ttcttggcat ttattctaaa acgtttgggc ggtggcattt 2580 ttgtaataag aagggtgtac accgattgag agcctctcca aaactcatat gaatcggtgt 2640 atggtgtaca atatatagta agaagttcct aaggctaggt aacacgtggc ggccatccgt 2700 taatatt 2707 //