ID KC577539; SV 1; circular; genomic DNA; STD; VRL; 2754 BP. XX AC KC577539; XX DT 20-MAY-2013 (Rel. 116, Created) DT 20-MAY-2013 (Rel. 116, Last updated, Version 1) XX DE Ageratum yellow vein China virus isolate Sn1 segment DNA-A, complete DE sequence. XX KW . XX OS Ageratum yellow vein China virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2754 RA She X.M., He Z.F.; RT "Submission directly"; RL Unpublished. XX RN [2] RP 1-2754 RA She X.M., He Z.F.; RT ; RL Submitted (05-FEB-2013) to the INSDC. RL Plant Protection Research Institute, Guangdong Academy of Agricultural RL Sciences, Jinying Rd No. 7, Tianhe District, Guangzhou, Guangdong 510640, RL China XX DR MD5; eddf808e26580a297531b991c42add18. XX FH Key Location/Qualifiers FH FT source 1..2754 FT /organism="Ageratum yellow vein China virus" FT /segment="DNA-A" FT /host="Synedrella nodiflora L.Gaertn" FT /isolate="Sn1" FT /mol_type="genomic DNA" FT /country="Philippines:Davao" FT /collection_date="26-Sep-2012" FT /db_xref="taxon:202567" FT gene 132..482 FT /gene="AV2" FT CDS 132..482 FT /codon_start=1 FT /gene="AV2" FT /product="movement protein" FT /db_xref="GOA:R4QJX1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:R4QJX1" FT /protein_id="AGL74865.1" FT /translation="MWDPLLNEFPETVHGLRCMLAIKYLQLVENTYSPDTLGYDLVRDL FT ILVIRARNYVEASRRYSHFHSRLEGTSPSELRHPRDEPCCCPHCPRHKQKEVMDQQAHV FT SQAQNVQNVQKP" FT gene 292..1065 FT /gene="AV1" FT CDS 292..1065 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:R4QMA1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:R4QMA1" FT /protein_id="AGL74866.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDTPVMSRAAAPTVLVTNRKRSW FT TNRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGSGLTH FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTAMDFGQVFNMYDNE FT PSTATIKNDLRDRYQVLRKFTSTVTGGQYASKEQALVRKFMKINNYVVYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1062..1466) FT /gene="AC3" FT CDS complement(1062..1466) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:R4QU84" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:R4QU84" FT /protein_id="AGL74867.1" FT /translation="MDFRTGELLTATQCESGVYTWTIKNPLYFKITQHDERPFMTNKDI FT ITIQIQFNYNLRKALGIHQCFLIFKIWTRLRPQTWRFLRVFKYQCMKYLDSLGVVSINN FT VIRACNHVLWDVLENTEYVTHSHIIKFNLY" FT gene complement(1207..1614) FT /gene="AC2" FT CDS complement(1207..1614) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:R4QXL0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:R4QXL0" FT /protein_id="AGL74868.1" FT /translation="MQNSSPSHNHCTQVPIKVKHRIAKKRTVRRRRVDLTCGCSYYFGI FT HCANHGFSHRGITHCNSMREWRVYLDNQKSPIFQDNPTRRETIHDEQRHHNDPNTVQLQ FT PEESVGNTPVFSDLQNMDSFTSSDLAFLKSI" FT gene complement(1514..2602) FT /gene="AC1" FT CDS complement(1514..2602) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiator protein" FT /db_xref="GOA:R4QWR6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:R4QWR6" FT /protein_id="AGL74869.1" FT /translation="MPPPKKFRINAKNYFLTYPQCSLTKDDALSQLQTLETPTNKKYIK FT ICRELHEDGSPHIHVLIQFEGRFQCQNNRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAKALNSGSKSEALNVIKELAPKDFVLQFH FT NLNSNLDRIFSPPLEVFVCPFLSSSFDQVPEELEEWVSENVRDAAARPWRPKSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSALKDWALKNAEFITITQPL FT YSGTNQSETQNSQEEDSSETES" FT gene complement(2155..2445) FT /gene="AC4" FT CDS complement(2155..2445) FT /codon_start=1 FT /gene="AC4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:R4QJX4" FT /protein_id="AGL74870.1" FT /translation="MGALISTCSSSSRAGSSAKITDSSIWYPLPGQHISIRTFRELNPA FT PTSSPISTRTETLSNGANSRSTDDLHEGDNRQPMMLTPRHLTAAVSQRLLM" XX SQ Sequence 2754 BP; 745 A; 548 C; 581 G; 880 T; 0 other; accggatggc cgcgattttt ttaaagtgga ccctcccact aacatttgtc tgccaataag 60 aacgctcctt caaagcttat ttattatttc gtccttataa atacttggtc actacgtttt 120 taaattgcat aatgtgggat ccactcttaa acgagttccc agaaaccgta catggtctac 180 ggtgtatgct tgctattaag tatttacaac ttgttgaaaa tacgtactca ccggatactc 240 tgggatacga tcttgtacgt gatttaatac ttgttatcag agctcgcaat tatgtcgaag 300 cgtcccgccg atatagtcat ttccactccc gcctcgaagg tacgtcgccg tctgaacttc 360 gacacccccg tgatgagccg tgctgctgcc cccactgtcc tcgtcacaaa cagaaagagg 420 tcatggacca acaggcccat gtatcgcaag cccagaatgt acagaatgta cagaagccct 480 gatgttccca aaggttgtga aggcccatgt aaggtccaat cgtatgaaca gaggcacgac 540 atatcccatg ttggtaaagt attatgtgtt agtgatgtca ctcgtggtag tgggcttacc 600 catcgtgttg gtaagagatt ctgtgtcaag tccgtttatg tattgggtaa aatatggatg 660 gatgaaaata tcaaaaccaa gaaccatacg aacactgtga tgttttatct tgttcgtgat 720 agaaggcctt ttggtactgc tatggatttt ggtcaggtgt ttaacatgta tgataatgag 780 cccagtactg ctactatcaa gaatgatctt cgagatcgtt atcaagtttt aaggaaattc 840 acttctacag tcacaggtgg tcaatatgct tctaaggaac aggcgttggt taggaaattt 900 atgaagatta ataattatgt agtttataat catcaagaag ctgctaagta tgacaatcat 960 actgagaatg ctttgttatt gtatatggct tgtactcatg ccagtaatcc agtgtatgct 1020 actttgaaga tcagaatcta tttctatgat tctgttcaga attaataaag attgaatttt 1080 attatatgag aatgtgttac atattctgtg ttttccaata catcccataa tacatgatta 1140 catgctctaa ttacattgtt aatactaact acacccaaac tatctaaata cttcatacat 1200 tgatatttaa atactcttaa gaaacgccaa gtctgaggac gtaaacgagt ccatattttg 1260 aagatcagaa aacactggtg tattcccaac gctttcctca ggttgtagtt gaactgtatt 1320 tggatcgtta tgatgtcttt gttcgtcatg aatggtctct cgtcgtgttg ggttatcttg 1380 aaatataggg gatttttgat tgtccaggta tacacgccac tctcgcattg agttgcagtg 1440 agtaattccc ctgtgcgaaa atccatgatt tgcacaatgt atgccgaagt agtatgagca 1500 cccacacgtt agatcaactc tccgtctccg aactgtcctc ttcttggcta ttctgtgttt 1560 cactttgatt ggtacctgag tacaatggtt gtgtgatggt gatgaattct gcattcttta 1620 atgcccagtc tttgagtgca gaatttttat cctcgtccaa gtactcttta tatgatgatg 1680 ttgggcctgg attgcatagg aagatagtgg gaattccacc tttaatttga atgggcttcc 1740 cgtactttgt gttgctttgc cagtcccttt gggcccccat gaattcttta aagtgcttta 1800 agtagtgggg atcgacgtca tcaatgacgt tgtaccaggc atcattattg tatacctttg 1860 gactgagatc cagatgccca cacaaataat tatgtggtcc tagagacctg gcccacattg 1920 tcttccccgt tctactatcg ccctctatga caatactttt aggtctccaa ggccgcgcag 1980 cggcatccct tacattctcg gagacccact cttcaagttc ttctggaact tgatcaaatg 2040 aagaagaaag aaaaggacaa acaaaaacct ctaaaggagg tgaaaaaatc ctatctaaat 2100 tagaatttaa attatgaaat tgtaaaacaa aatctttagg agctaactcc ttaattacat 2160 taagagcctc tgacttactg ccgctgttaa gtgccttggc gtaagcatca ttggctgtct 2220 gttgtccccc tcgtgcagat cgtccgtcga tctggaattc gccccattcg agagtgtctc 2280 cgtccttgtc gatataggac ttgacgtcgg agctggattt agctccctga atgttcggat 2340 ggaaatgtgc tgacctggaa ggggatacca gatcgaagaa tctgttattt tggcactgga 2400 acctgccctc gaactggatg agcacgtgga tatgagggct cccatcttcg tgaagctctc 2460 gacagatctt gatgtatttt ttatttgttg gtgtttctag ggtttgcaat tgggaaagtg 2520 cgtcgtcttt agtaagagag cattgtggat aagtgaggaa ataatttttg gcatttattc 2580 gaaatttttt aggtggaggc atgttgactt ggtcaatcgg tgtctctcag agtattatgg 2640 caatcggtgt atggtgtctt atttatagct agacaccaaa tggcattatc gtaattctca 2700 aaagtaattc aaaattcaaa ttttgaatcg aaaagcggcc atccgtataa tatt 2754 //