ID KC456162; SV 1; circular; genomic DNA; STD; VRL; 2723 BP. XX AC KC456162; XX DT 03-MAR-2013 (Rel. 116, Created) DT 05-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Tomato leaf curl Palampur virus isolate Punjab segment DNA B, complete DE sequence. XX KW . XX OS Tomato leaf curl Palampur virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2723 RX DOI; 10.1016/j.virusres.2013.03.011. RX PUBMED; 23578824. RA Kanakala S., Jyothsna P., Shukla R., Tiwari N., Veer B.S., Swarnalatha P., RA Krishnareddy M., Malathi V.G.; RT "Asymmetric synergism and heteroencapsidation between two bipartite RT begomoviruses, tomato leaf curl New Delhi virus and tomato leaf curl RT Palampur virus"; RL Virus Res. 174(1-2):126-136(2013). XX RN [2] RP 1-2723 RA Richa S., Kanakala S., Swaranalatha P., Krishnareddy M., Veer B.S., RA Tiwari N., Malathi V.G.; RT ; RL Submitted (04-JAN-2013) to the INSDC. RL Division of Plant Pathology, Indian Agricultural Research Institute, Pusa, RL New Delhi, Delhi 110012, India XX DR MD5; 11db1f9d2454c2a8ccbf0ae8e9d9630d. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2723 FT /organism="Tomato leaf curl Palampur virus" FT /segment="DNA B" FT /host="tomato" FT /isolate="Punjab" FT /mol_type="genomic DNA" FT /country="India" FT /isolation_source="leaves" FT /collected_by="Krishnareddy M" FT /collection_date="2010" FT /identified_by="V.G.Malathi" FT /db_xref="taxon:526476" FT CDS 428..1234 FT /codon_start=1 FT /product="BV1" FT /note="nuclear shuttle protein" FT /db_xref="GOA:M1R361" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:M1R361" FT /protein_id="AGG13400.1" FT /translation="MAFPSPYTTPRRLGSSYPRRYNGTRSVRFWKFRKSQPWLRHRPSA FT SSSRSATELFGEPISKQYTRKEICETQQGSEYVLQNNRYMTSYVTYPSKTRTGTNNRVR FT SYIKLKSLNISGTFAIRSTEMMPDVDQSGGLYGVMSVVVVRDKSPKIYSTAQPLIPFVD FT IFGSVNACRGTLKVAERHRDRFVVLNQSSIIVNTPHTNTMKKFCIRNCIPKTYTTWVTF FT RDEEEDNCTGLYSNTLRNAILIYYVWLSDVPSQVDLYSNVILNYIG" FT CDS complement(1300..2145) FT /codon_start=1 FT /product="BC1" FT /note="movement protein" FT /db_xref="GOA:M1QEJ1" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:M1QEJ1" FT /protein_id="AGG13401.1" FT /translation="MSIRNDREGLSVGGYVQSERVEYALTNEAAEVKLTFPSMFEQKIS FT QLRNRCMKIDHIVLEYRSQVPINAVGHVVIEIHDMRLTEGDTKQAEFNIPIKCNCNLHY FT YSSSFFSLKDLNPWRVEYRVENTNVVDGVHFCRILGKLKLSSAKHSTDVEFRPPKIEIH FT SKEFTLNDIDFWSVGSKPQTRRLVDGSRLIGHSSRSLRVPYLTIGPNESWASRSEIGHS FT SVTSRPYKNLSGLDDSAIDPGPSASQAGSITREEIADIISKTVEQCIKSNVNAPLSKGV FT " XX SQ Sequence 2723 BP; 779 A; 560 C; 515 G; 869 T; 0 other; accgaaaggc cccggtttcc tggcaattca tcttagccgt tcttttttgt ctttatcata 60 atcctaacgg ttgtatttgt aacacgtgtt tatttggcag gctttattca tttaaagccg 120 tagcccgcgt tttagtgttg cgcattgtgg tccattcatt aatgcttatt tattgctttt 180 atgtggtccc gcgcactact aaaaagacgt tcaataaatc aaaatcatct gacaacgttt 240 ctttttattg atcggccaag atcaataggt aattggttcg aaatttccaa ccgtccgatt 300 attgatattt gctttaattc aaacatgaat tgtttgaatt ttatgtgttc ctcgacgtgc 360 ataatttccc tttataaacc ctaccattca tcaatgtctg aataggtttt tatacgtctt 420 tatctaaatg gcttttcctt ctccttatac cacccctcgt cggttaggtt catcctatcc 480 gagacggtac aacggaacca gaagcgtgag attctggaaa ttccgtaaat ctcagccatg 540 gttacgtcat cgtccaagtg catcgtcttc cagatctgct actgaactgt ttggagagcc 600 tatctccaaa caatatacgc gtaaggaaat ctgtgaaact caacaggggt cggaatatgt 660 tttgcagaac aatcgatata tgacctctta cgttacatat ccatctaaaa ctagaactgg 720 aacgaacaac cgagttcgtt cttacatcaa gttaaagagt ctgaacatat ctggaacatt 780 tgccattcgc agtactgaaa tgatgccgga cgttgaccag agtggtggtt tatatggtgt 840 gatgtcagta gttgttgtca gagataaatc gcctaagatt tattcaactg cccaaccatt 900 aatcccgttt gttgatatat tcggatccgt aaacgcttgc aggggaacat tgaaggtggc 960 ggaacgccac cgcgatagat ttgtagtttt gaatcagtcg tcaataattg ttaatactcc 1020 tcatactaac actatgaaaa aattctgcat tcgcaattgc attccaaaaa cctatactac 1080 ttgggtcacg ttccgcgacg aagaagagga caattgcacc ggactatatt caaacacact 1140 gcgaaatgct attcttattt attatgtatg gttaagcgac gtaccctctc aagtcgattt 1200 gtatagtaat gtaattctta attatattgg ctgattaaat gtatcaattc ttaaaaatgc 1260 acccgtaatg caaaagaaat aaatttgaca taaaatttat tagacgccct ttgaaagtgg 1320 agcatttaca ttggatttta tacattgttc tactgttttt gaaattatat ctgcaatttc 1380 ttctctcgta atacttcctg cttgtgacgc cgaaggacca ggatcgattg cggaatcgtc 1440 cagtccgctt aagttcttgt aaggtctgct ggtgacggac gaatgtccga tctctgatct 1500 gctagcccat gactcgttcg gacctatcgt cagatatggt acccttaacg atctagaact 1560 gtgtccgatt aatcttgaac catccaccaa acgtcttgtc tgtggtttcg aacccacaga 1620 ccagaaatca atgtcgttta atgtgaattc cttgctatgt atttcaattt tcggtggtcg 1680 gaattcgacg tcagtcgaat gttttgccga cgatagcttc aatttaccca aaatcctgca 1740 gaagtgaact ccatctacga cgtttgtgtt ctccacccta tattcaactc gccaaggatt 1800 taaatccttg agagagaaga acgaagaaga gtagtagtgc aggttacaat tgcatttgat 1860 gggaatatta aactcagcct gtttcgtgtc cccttccgtt aacctcatgt cgtgtatttc 1920 aatcacgaca tgtccaactg cattaatggg tacctgactg cggtattcta gtacgatgtg 1980 atcaattttc atgcatctgt ttcgtaattg gcttattttc tgctcgaaca tcgacggaaa 2040 cgttaatttg acctctgcag cctcgtttgt gagcgcgtac tcaacgcgtt cagactgaac 2100 gtaccctccc acggacaaac cctccctatc atttcttatt gacatattgg aagcgcagcg 2160 aaaaagggag cgcagcggat atgcagtaaa acctgcgaac acaaagaact acagagcttg 2220 atggaggaaa tgaaaagcta aaatcaacga agttgtattt tgttagcaac gacgaacatt 2280 gttttataat gtctctaccg tcatgtcgta atcaaatcaa acaaactcaa acggacggca 2340 cagattttat ggagtaaaag ctattgtgcc tatgcaactt taatgaatta gggttttgct 2400 atattttctt cattttgtga tacagtaaat tggttacaat ttatgagttg tttgcaatat 2460 atgtatgttc ctgaaaaaat ggaagcccat atttacaggc ccaatccaaa agcttcaagt 2520 catattttaa aacgacctcg ttttaaagga gaaaagttaa tgcgtctaga gagaagtcac 2580 attttctctc tctaaaatcc atccggtgtc tctcaacttc ttgtattata ttggtgtctg 2640 gggtcctata tatacttaaa accctaaatg gcataaatgt aaatttagag aaaactacta 2700 aggggccttt cgtatataat att 2723 //