ID KC433710; SV 1; linear; genomic RNA; STD; VRL; 5142 BP. XX AC KC433710; XX DT 10-APR-2013 (Rel. 116, Created) DT 05-NOV-2014 (Rel. 122, Last updated, Version 2) XX DE Ustilaginoidea virens RNA virus 1, complete genome. XX KW . XX OS Ustilaginoidea virens RNA virus 1 OC Viruses; Riboviria; Totiviridae; Victorivirus; unclassified Victorivirus. XX RN [1] RP 1-5142 RX DOI; 10.1007/s00705-014-2144-x. RX PUBMED; 24938486. RA Zhong J., Lei X.H., Zhu J.Z., Song G., Zhang Y.D., Chen Y., Gao B.D.; RT "Detection and sequence analysis of two novel co-infecting double-strand RT RNA mycoviruses in Ustilaginoidea virens"; RL Arch. Virol. 159(11):3063-3070(2014). XX RN [2] RP 1-5142 RA Zhong J., Zhu J.-Z., Lei X.-H., Gao B.-D.; RT ; RL Submitted (02-JAN-2013) to the INSDC. RL Department of Plant Pathology, Hunan Agricultural University, Nongdalu, RL Changsha, Hunan 410128, China XX DR MD5; d58f55c1424d8837af8cb0c27a95962d. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..5142 FT /organism="Ustilaginoidea virens RNA virus 1" FT /host="Ustilaginoidea virens" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="2011" FT /db_xref="taxon:1312445" FT CDS 274..2604 FT /codon_start=1 FT /product="putative coat protein" FT /note="HvRV1-CP" FT /db_xref="GOA:M9QS71" FT /db_xref="InterPro:IPR008871" FT /db_xref="UniProtKB/TrEMBL:M9QS71" FT /protein_id="AGI61064.1" FT /translation="MSALSTFLSGGVVAKGPLKNNEVRRYYTTLISEATLNGVQDVAGK FT TVVWKVGYAYSGTAGIDYDGVYKIHAEKVRADPKAYPNSKKRNELLKPLIREAYNLKDS FT EELPIPAALVCPKSVAIRLQTPYPVNEAISAEFANAARRYSGVVGTHGTADFCGIVAQL FT AKGLAFFASTGGLTMRDLAGGNSYSYMAVGNHTAPLVASTTSIWVPRYAESLMAPNIMA FT ALVAAGSAVGSTIVTDLLPTDVTNTPLLTEANHLELAAGVYHALRVLGTNMEANGAGQL FT FAYAVTVGIHSVVTVVGMTDEGAYMRDVFRSTSFAPSYGGISTVLPEWHGFPRPADSSL FT AGWVGLVDSIALGTAASVAIADPCVAIADRYYPTTLTGRYEYGGEPGMGYVGDENDARI FT ISGKIMQLAPSFTRNYFKVLARLFSVTPHENSSVGLTHMIHAFSSETLRDSRHLQHPSV FT SPFYWVEPTGIITFDTSDFTATAAGFGTLATPSQPGTIPMFERAEVTQNVGDVSDVLVA FT WRSARTSGLAIHLNNHVEAGMENIRITGCDPNSWAQLGGASQSVSNRVTAGNDLASYMW FT ARSDVGVPAPGEAMYLGEAISLLVRHDTLDGNTWANTPNHVPRDVEFGNNVTIRVGLLA FT PYGVGPIGPNRKANRAFTAALRALDAARESGMIRAPKLCGTIKLTDQAFGRQAAVPVAI FT APPSPKAANRPVTTVSQPPQSDARPVEPQNYAESPTAHVYTQGPKTAPGPAQSVIASVR FT QMAAEESAETASVAAAPQAGAAQ" FT CDS 2604..5075 FT /codon_start=1 FT /product="putative RNA-dependent RNA polymerase" FT /note="HvRV1-RdRp" FT /db_xref="GOA:M9QPJ5" FT /db_xref="InterPro:IPR001795" FT /db_xref="UniProtKB/TrEMBL:M9QPJ5" FT /protein_id="AGI61065.1" FT /translation="MESAAVRANELGAYGHALLRFLPPSEVCDDIAMSNTDAQWHMLGS FT LGTKYGYISQVACSLLVCNTPFQVMLHERHIVELLHLVKPVLTPHCEYDVTSPCSACIE FT LDSLGRVGPGSTVLAFKGDIAHTKCNIAFSDAWVDLCNNSPAIASQVQRSGRALHGCYN FT DQGTAIIMYTAALFQHLKGEAFPYSYHFVRNPHDAKAFSTILKAMGANATPLGSVLTEA FT NTLTGRGVNPIDVEAAGRDRTQYDKIVRDLFHADEGKLREAIRTILREEIGSANVEFPS FT LEEYFSQRWLWTVNGSHNFTTQRFYDPEDHRPPGAARMFRRAYAECTSYDRVAAWNGKS FT FFSPSAKLEHGKSRAIFAGDTLTYFRFQHFLKHVEDVWTGKHVLLNPGRGGMYGMLKRI FT RGISAGTGVHTMMDYTDFNSAHTNASMRILFEEATSYVGYDPDMGALLANSFDNSYMVT FT SDGPRKIAGTLMSGHRATTFINSVLNRAYLLVVNPSILRLPAVHVGDDVYLSPPSLHAA FT AELMDDVRMSGLRMNPLKQSVGLITGEFLRMAFGSGSAFGYAPRAIASMISGNWTNSNE FT LTRREQVENLVTTSWSLTNRCRNPAAAVLATTALSKRCGLSKCDAEALLNGTLALGSGP FT ARAGKHVYKRVEIPAPPVSLIPKEVLSKLPSRATDDYLRNHTSTLERTALQLLGTSPKV FT TMLESSYAKTLRPVDEVPLPMGYAKEWMFGPASVQRGVSIDECRNRDVIHGALSEYPLI FT VLFKEQFTKEQLAILLRMKCDLYTNDVRVAAFGAEARGMVVEGWLPRADVQHASRRATE FT MVLSTSINLYF" XX SQ Sequence 5142 BP; 1219 A; 1314 C; 1423 G; 1186 T; 0 other; aagatttctt ttttgcggaa atctgcgtgt atcattacac gtcgttgaac gtcctacccc 60 ctgccctcgc ggataaaaca gggtcacttc ggtgagagcg tgcgcaattt taccataggc 120 cgattggtgc atggtcacgt ttgggatggt agtgagagga tggagggcac ctggatgacg 180 ccaagtcctt gtacctttga agtcgcatca catctgtacg atcagtaaac atagcaacct 240 caaagtaaat ttcactaacc ttcaatcgcc aaaatgtctg ccctctccac tttcttgtcc 300 ggtggtgtcg tcgccaaggg gccgctgaag aacaatgaag tgcgccgcta ctacaccacg 360 ttgatcagtg aagcaactct caacggtgtg caagatgtcg cgggcaaaac tgtggtgtgg 420 aaggtcggtt atgcctattc aggcacagcc ggcattgatt acgatggggt gtataagata 480 catgcagaga aggtacgtgc tgacccaaag gcgtacccga attcaaagaa aagaaatgaa 540 cttttgaagc ctctcatacg tgaggcgtac aacttgaagg acagtgagga gttgccgatc 600 ccggccgccc ttgtttgtcc aaagtctgtg gcaatcaggc tgcagacacc ctacccagtg 660 aacgaggcca tatcggctga gtttgccaat gctgcgcgga gatactccgg tgtcgtcggt 720 acacacggca cagcggattt ctgtgggatc gtcgcccagc ttgccaaggg cctggcgttt 780 tttgcaagca caggtggcct cacgatgcgt gatctggcgg gggggaacag ctacagctac 840 atggctgtgg ggaaccacac ggcgccgctg gtcgctagta caacgagcat atgggtgccg 900 aggtacgctg agtccctaat ggcccccaat atcatggcag cgctcgttgc tgctggtagc 960 gcggtaggtt cgaccatcgt aacggacttg ctgccaactg acgtgacgaa cacgccgtta 1020 ttaacggaag caaatcatct tgagctcgcg gccggtgtat accatgctct tagagtgctg 1080 ggcaccaaca tggaggcaaa tggggcaggg caattatttg cgtatgcagt gactgtgggc 1140 atccattccg tagtgactgt ggtcggtatg acagacgagg gggcgtacat gcgggatgtt 1200 tttcggagca cttcgtttgc gccaagttac ggcgggattt cgacggttct acccgagtgg 1260 cacggctttc ctaggccggc tgattcatca cttgcgggat gggtgggtct ggtcgatagc 1320 attgcattgg gcacggcagc gagcgtcgca atcgcggatc cgtgtgttgc aatagcggac 1380 cggtactacc caacaacctt gacgggacgt tatgagtatg gtggtgagcc tggtatgggc 1440 tacgtcggcg acgagaatga tgcccgtata atatcgggaa aaatcatgca gctggcgccc 1500 agttttacca ggaactattt caaagtgctg gcgcgtctgt tctcagttac gccgcatgag 1560 aatagttctg tcggcctcac gcatatgata cacgcattct cgtcggagac actacgggat 1620 agtaggcacc tgcagcatcc tagtgtttca ccattctatt gggttgagcc gacaggtatc 1680 attacgttcg acacgtcgga ttttactgcc actgcggccg gctttgggac actggctaca 1740 ccgtcacagc ctggtacgat ccccatgttc gaacgagcag aggtcacaca aaatgtgggt 1800 gacgtgtctg atgtactcgt ggcatggaga tctgcgcgca cttcaggtct ggcaatacac 1860 ctgaacaacc acgtcgaggc cggtatggag aacatacgga ttacagggtg tgaccccaac 1920 agttgggctc agctcggtgg agcatcgcaa agcgtaagca atcgtgtgac ggcgggcaat 1980 gatctcgctt cgtacatgtg ggcgcgctcc gacgtcggtg ttccggcgcc aggcgaagcg 2040 atgtacctgg gtgaggccat ctcgctgctc gtacgccatg acacgcttga tggaaacacg 2100 tgggccaata cgccaaacca cgtgccccgt gacgttgagt tcggtaacaa cgtcactatt 2160 cgtgtcggcc tgctcgcgcc ttacggagtg ggcccgattg gacctaatcg taaggcgaac 2220 agggcgttca ctgctgcact acgtgccttg gacgccgcgc gagagtcggg gatgatacgg 2280 gcgccgaaac tgtgcggaac gatcaaacta accgatcaag cattcggacg ccaagccgcc 2340 gtgcctgtag caatcgcgcc accgtcgcca aaggctgcaa atcgaccggt aacgaccgta 2400 tcccaacctc ctcaatctga cgcccgccca gtcgaaccac aaaactatgc agaaagcccg 2460 actgcacatg tttacactca agggcccaaa acagcacccg gacctgcaca atcagttatt 2520 gcgtctgtac gtcaaatggc agctgaagaa agcgccgaga ctgcgtcagt cgctgctgct 2580 ccgcaggcgg gtgctgctca gtaatggagt cggccgccgt acgtgccaat gaattaggtg 2640 cgtacggcca cgctctattg cggtttttgc cccccagtga ggtgtgtgat gacattgcga 2700 tgtctaatac agacgcgcaa tggcacatgc taggttcact gggtactaag tacggatata 2760 tctcacaggt cgcttgttcg ctgttagtgt gtaacacacc atttcaggta atgttgcatg 2820 aacggcatat cgtggaatta ctgcaccttg tgaagcctgt actcacaccg cactgtgagt 2880 atgacgtcac gagcccgtgc agtgcatgca tagaattaga ctccttgggc cgcgtaggac 2940 cgggttccac agtcttagct ttcaaaggag atattgctca caccaaatgc aatatcgcct 3000 tcagtgatgc ctgggtcgat ctatgcaaca attcaccggc cattgctagc caggtacagc 3060 ggagcggacg tgcattacat ggttgttaca atgatcaagg tacagcgata atcatgtaca 3120 cggccgctct gttccaacat ctaaagggtg aggcattccc gtacagttac cactttgtac 3180 ggaatccgca cgacgcaaag gctttctcaa caatactgaa agctatgggt gctaatgcca 3240 ctccactcgg gtcagtattg acagaagcca acactctgac cggtcgtggt gtaaacccta 3300 ttgatgttga agcggcagga cgggatcgca cacagtacga caaaattgtt cgcgatcttt 3360 ttcatgccga cgaaggcaaa ctgcgtgagg cgatacgcac aatattgcgc gaggaaatcg 3420 gttcagcgaa cgttgagttt ccatctctcg aggaatattt ctctcaacgg tggctgtgga 3480 ccgtgaacgg gagccacaac ttcaccaccc agcggttcta tgaccctgag gatcacaggc 3540 cgccgggtgc tgcacgaatg ttccgtagag catatgcgga atgtacatct tatgatcgtg 3600 tggccgcgtg gaatggcaag tctttcttct cgccgagtgc aaaactcgaa cacggtaaat 3660 cacgtgcaat atttgccggt gacaccttaa cttacttcag attccagcac ttcctgaagc 3720 atgttgagga tgtttggacc ggtaagcacg tcctcttgaa cccggggcgc ggtggtatgt 3780 atggtatgct taagcgtatc aggggtatct ccgcgggcac tggtgtgcat acgatgatgg 3840 attacactga cttcaacagt gcccatacga atgccagcat gaggatactg ttcgaggaag 3900 ccacttcata cgtaggctac gatccagaca tgggagcact gttagcaaac agcttcgaca 3960 attcatacat ggttacgagt gacggaccac gcaaaatcgc aggcacgcta atgtctggtc 4020 accgcgcaac cacgttcatt aacagtgttc tgaaccgagc atacctgttg gtcgtgaatc 4080 caagtatact ccggctgcca gctgtccatg tcggcgatga tgtatatctt tcgccgccct 4140 cattacacgc tgctgcggag ttgatggatg atgtgcgtat gtctggtcta cgtatgaatc 4200 ctcttaagca gtctgtcggt ctcataacgg gagagttctt gcggatggcg tttggatccg 4260 gcagtgcatt cggttatgca ccacgagcca tcgccagcat gataagtggt aattggacca 4320 attctaatga actaacgcgc cgggagcaag ttgaaaacct ggtgacaacg agttggtctc 4380 tgacaaatcg ctgccgcaac ccagctgcgg cagtattagc cacaacagct ctctcaaaac 4440 ggtgtgggct cagtaagtgc gatgctgaag cccttctcaa tggtacgctg gctcttggta 4500 gcggtccggc acgcgcaggt aagcacgtat acaaacgtgt agagattcct gcgcccccag 4560 tatctctgat ccctaaggag gtactgagca aattgccgag ccgtgctaca gacgactatt 4620 tgcgcaacca cacgtcaact cttgaacgta ccgctctgca attgctcggt accagtccta 4680 aggtcacgat gttagagtct agctatgcga agactctacg accggtggat gaggtccctt 4740 tgccgatggg gtatgcaaaa gagtggatgt ttggtccggc gagtgtacaa cgcggcgtct 4800 ctattgatga atgcagaaat agggatgtga tacacggggc actaagcgaa taccctttaa 4860 tcgtgctatt caaagaacag ttcacgaagg agcaacttgc tatattgtta cgtatgaaat 4920 gtgaccttta tacgaacgat gtccgagttg ctgctttcgg tgctgaagca cgggggatgg 4980 tggtcgaggg ctggctacca cgcgcggatg tccaacacgc gtcaagacga gccacggaaa 5040 tggtattgtc aacaagcatt aatctgtact tctaataatg tgattgacta ctaccatccc 5100 gcggcttccc ttacgaagtg gggtgacccc ccacaaaatg cg 5142 //