ID KC430935; SV 1; circular; genomic DNA; STD; VRL; 2629 BP. XX AC KC430935; XX DT 07-APR-2013 (Rel. 116, Created) DT 07-APR-2013 (Rel. 116, Last updated, Version 1) XX DE Abutilon golden mosaic Yucatan virus isolate Conkal-2007 segment A, DE complete sequence. XX KW . XX OS Abutilon golden mosaic Yucatan virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2629 RA Torres-Herrera I., Cardenas-Conejo Y., Ambriz-Granados S., RA Mauricio-Castillo J.A., Moreno-Valenzuela O., Arguello-Astorga G.R.; RT "New SLCV clade begomoviruses isolated from weeds in Yucatan, Mexico"; RL Unpublished. XX RN [2] RP 1-2629 RA Torres-Herrera I., Cardenas-Conejo Y., Ambriz-Granados S., RA Mauricio-Castillo J.A., Moreno-Valenzuela O., Arguello-Astorga G.R.; RT ; RL Submitted (31-DEC-2012) to the INSDC. RL Division de Biologia Molecular, Instituto Potosino de investigacion RL Cientifica y Tecnologica (IPICYT), Camino a la Presa San Jose 2055. Col. RL Lomas 4 seccion, San Luis Potosi, S.L.P. 78216, Mexico XX DR MD5; 0baa18bf8929ee8945be5e1e68ccaca1. DR EuropePMC; PMC6344024; 30673741. DR EuropePMC; PMC6521247; 30987360. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAStar v. Edit seq, MegAlign CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2629 FT /organism="Abutilon golden mosaic Yucatan virus" FT /segment="A" FT /host="Abutilon permolle" FT /isolate="Conkal-2007" FT /mol_type="genomic DNA" FT /country="Mexico:Yucatan, Suytunchen" FT /collection_date="2007" FT /db_xref="taxon:1312723" FT gene 221..973 FT /gene="AV1" FT CDS 221..973 FT /codon_start=1 FT /gene="AV1" FT /product="capsid protein" FT /note="capsid protein; encapsulates the viral genome; AR1" FT /db_xref="GOA:M4YF97" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:M4YF97" FT /protein_id="AGI42760.1" FT /translation="MPKRDLPWRSIAGTSKVSRNANYSPRAGSGPRNKAFEWVITPMYR FT KPRIYRMIRTPNVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFC FT VKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVK FT NDLRDRYQVMHKFYGKVTGGQYASNEQSIVQRFWKVNNHVVYNHQEAGKYENHTENALL FT LYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(970..1368) FT /gene="AC3" FT CDS complement(970..1368) FT /codon_start=1 FT /gene="AC3" FT /product="REn" FT /note="rep-interacting protein; enhances function of Rep FT protein; AL3" FT /db_xref="GOA:M4YBP2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4YBP2" FT /protein_id="AGI42761.1" FT /translation="MDSRTGELITARQAENGVYIWEIENPLYFKMYRVEDPMYTRTRVY FT SIQIRFNHNLRRALHLHKAYLNFQVWTTSMTASGSTYLARFRHLVLLYLDRLGVISLNN FT VIRAVRFATDKAYVNYVLENHSIKFKFY" FT gene complement(1115..1504) FT /gene="AC2" FT CDS complement(1115..1504) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP" FT /note="transcription activator; activation of late genes; FT silencing-suppressor; AL2" FT /db_xref="GOA:M4YC57" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4YC57" FT /protein_id="AGI42762.1" FT /translation="MRFSSPSNPPSIKTAHRQAKKRAVRRRRIDLECGCSIYFHIGCTG FT HGFTHRGTHHCTSGREWRLYLGDRKSPLFQDVPSRGPDVHQDQGVQHTDTVQPQPEESV FT ASPQSLPELPSLDDIDDSFWVDLFS" FT gene complement(1416..2495) FT /gene="Rep" FT CDS complement(1416..2495) FT /codon_start=1 FT /gene="Rep" FT /product="replication protein" FT /note="AL1; rolling-circle initiation protein" FT /db_xref="GOA:M4YSI8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4YSI8" FT /protein_id="AGI42763.1" FT /translation="MPRAPGSFRLAAKNIFLTYPQCDLSKDEALQMLQTLSWSVVKPTY FT IRVAREEHSDGFPHLHCLLQLSGKSNIKDARFFDLTHPRRSATFHPNIQAAKDTNAVKN FT YITKEGDYCESGQYKVPGGTKANKDDVYHNAVNAPGVGEALDIIRAGDPKTFIVSYHNI FT KANIERLFVKAPEPWVPPFPLSSFTNVPDEMQEWADDYFGRGSAARPERPLSLIVEGDS FT RTGKTMWARSLGPHNYLSGHLDFNARVYSNQVEYNVIDDVAPHYLKLKHWKELLGAQKD FT WQSNCKYGRPVQIKGGIPSIVLCNPGEGASYKDFLDKEENSALRNWTIKNAVFITLQSA FT LYQDSTQASQEESRQEEAD" FT gene complement(2024..2416) FT /gene="AC4" FT CDS complement(2024..2416) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /note="AC4 protein" FT /db_xref="UniProtKB/TrEMBL:M4YDT9" FT /protein_id="AGI42764.1" FT /translation="MKLFKCFKPSLGQSSNPHISESHERNIQTGSHTFTVSSSSPASPT FT SRMLDFSTSLTQEGLPLFTQISRLPKTPTPSRITSPKRVIIVNPDNTRCLAEQRQIRTT FT FTTTPSMHLVWERLLTLSELEIQRRS" XX SQ Sequence 2629 BP; 654 A; 595 C; 647 G; 733 T; 0 other; accggatggc cgcgaaattt ttggtgtcca gaactttaat ttagaactaa agttgcccct 60 cgcgtgcact ttcctcttta atttgattta aagcgctgca ctcgcgctat cgtccaatca 120 tattgcgcct gacgagtcta gatatttgca acaacttggg ccctaagttg ttggtccgtt 180 ataaattaaa gaggctttgg cccactgtgt ttaactcaaa atgcctaagc gcgatctccc 240 atggcgctcg atcgcgggaa cgtcaaaggt tagtcgaaat gctaactatt ctcctcgtgc 300 aggaagtggg ccaagaaaca aggcctttga atgggtgatc acgcccatgt acaggaagcc 360 caggatctac cggatgatta ggactcccaa tgtgcccaga ggttgtgaag ggccttgtaa 420 agttcagtcc tatgaacaac gccacgatat ctcacatgtc gggaaggtca tgtgcatctc 480 ggacgtgaca cgtggtaatg ggatcactca tcgtgtgggt aagcgtttct gtgttaagtc 540 tgtgtatatc cttggtaaga tctggatgga cgagaacatc aagctcaaga accacacgaa 600 tagtgttatg ttctggttgg tcagggatcg tagaccgtat ggcactccaa tggatttcgg 660 tcaggtgttc aatatgttcg acaacgagcc cagtactgct acggtgaaga acgatctacg 720 tgatcgttac caggtcatgc acaagttcta tggcaaggtg acaggtggac agtatgccag 780 caatgaacag tctatagtcc agagattctg gaaggtcaac aatcatgtgg tgtacaatca 840 ccaagaggct ggcaaatacg agaaccacac ggagaacgct ttgttactgt atatggcatg 900 tacccatgcc tctaatcctg tgtatgcaac gcttaagatt cgaatctact tctacgattc 960 gatcacgaat taataaaatt taaattttat tgaatgattt tccagtacat aatttacata 1020 cgctttgtct gttgcgaatc gaacagctct gattacattg ttaagactaa tcacgcctaa 1080 ccgatctaaa tacaagagca ctaagtgtct aaatctagct aaataagtcg acccagaagc 1140 tgtcatcgat gtcgtccaga cttggaagtt caggtaagct ttgtggagat gcaacgctct 1200 cctcaggttg tggttgaacc gtatctgtat gctgtacacc ctggtcctgg tgtacatcgg 1260 gtcctctact cggtacatct tgaaatagag gggattttct atctcccaga tatagacgcc 1320 attctctgcc tgacgtgcag tgatgagttc ccctgtgcgt gaatccatgc ccggtacagc 1380 ctatgtgaaa gtagatggag cacccgcact ccaggtcaat ccgcctcctc ctgacggctc 1440 tcttcttggc ttgcctgtgt gctgtcttga tagagggcgg attggagggt gatgaaaacc 1500 gcattcttga tcgtccagtt cctgagagct gagttttcct ctttgtccag gaaatcttta 1560 tagctggcac cctcacctgg attgcaaagc acgattgatg ggatccctcc tttaatttga 1620 actggtctgc cgtatttgca atttgactgc cagtccttct gggcccccag aagttctttc 1680 cagtgcttaa gctttagata gtgcggtgcg acgtcatcaa tgacgttata ctccacttga 1740 tttgagtaga cccgggcatt gaaatcgaga tgaccactaa gatagttatg cgggcccaac 1800 gaacgagccc acatcgtctt ccctgtcctc gagtcaccct caactatgag acttagtggt 1860 ctctcaggcc gcgcagcgga acctctccca aaataatcgt ccgcccactc ctgcatctcg 1920 tccggcacgt tagtgaaaga ggagagggga aaaggaggaa cccacggttc tggagccttt 1980 acaaagaggc gttctatgtt agcctttatg ttatgataac ttactatgaa cgtctttgga 2040 tctccagctc tgataatgtc aagagcctct cccacaccag gtgcattgac ggcgttgtgg 2100 taaacgtcgt ccttatttgc ctttgttccg ccaggcacct tgtattgtcc ggattcacaa 2160 taatcaccct ctttggtgat gtaattcttg acggcgttgg tgtctttggc agcctggata 2220 tttgggtgaa aagtggcaga ccttcttggg tgagtgaggt cgaaaaatct agcatccttg 2280 atgttggact tgccggagag ctggaggaga cagtgaaggt gtgggaaccc gtctgaatgt 2340 tcctctcgtg cgactctgat atatgtgggt ttgacgactg accaagagag ggtttgaagc 2400 atttgaagag cttcatcttt tgataagtcg cactgaggat atgttaagaa aatgtttttg 2460 gctgctaagc gaaatgaacc aggagctcgt ggcatttttg taatatagga aggggacact 2520 gggaggagct ctcaacttct gtgctataat gtggtgtctt ggtgttccat ttatactaaa 2580 agcctcttgg ggacactaag gggcaaaatc ggccatccgc aataatatt 2629 //