ID   KC404881; SV 1; linear; genomic RNA; STD; VRL; 582 BP.
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AC   KC404881;
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DT   06-MAY-2013 (Rel. 116, Created)
DT   04-JUN-2014 (Rel. 121, Last updated, Version 2)
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DE   Apple chlorotic leaf spot virus isolate LN-2-2-1 coat protein gene,
DE   complete cds.
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KW   .
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OS   Apple chlorotic leaf spot virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Trichovirus.
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RN   [1]
RP   1-582
RX   PUBMED; 24318575.
RA   Chen S., Zhou Y., Ye T., Hao L., Guo L., Fan Z., Li S., Zhou T.;
RT   "Genetic variation analysis of apple chlorotic leaf spot virus coat protein
RT   reveals a new phylogenetic type and two recombinants in China";
RL   Arch. Virol. 159(6):1431-1438(2014).
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RN   [2]
RP   1-582
RA   Chen S., Zhou Y., Ye T., Hao L., Zhou T.;
RT   ;
RL   Submitted (20-DEC-2012) to the INSDC.
RL   State Key Laboratory for Agrobiotechnology, China Agricultural University,
RL   No. 2, Yuanmingyuan West Road, Beijing 100193, China
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DR   MD5; 10a6e80ceae86435efe0a2d7b2d80a3a.
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: DNAMAN v. 5.2.2
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..582
FT                   /organism="Apple chlorotic leaf spot virus"
FT                   /host="apple"
FT                   /isolate="LN-2-2-1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Sep-2010"
FT                   /db_xref="taxon:12175"
FT   CDS             1..582
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:N0BTE8"
FT                   /db_xref="InterPro:IPR008879"
FT                   /db_xref="UniProtKB/TrEMBL:N0BTE8"
FT                   /protein_id="AGK64032.1"
FT                   /translation="MAAILNLQLKVDADLKAFLAAEGRPLHGKTGAILEQILESIFANI
FT                   AIQGTSEQTEFLDLVVEVKSMEDQKVIGSYNLKEVVNLIKAFKTTSSDPNINNMTFRQV
FT                   CEAFAPEARNGLVKLKYKGVFTNLFTTMPEVGSKYPELMFDFNKGLNMFIMNKAQQKVI
FT                   TNKNRRLLQTEVAKNENEAKLSSVTTDLCI"
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SQ   Sequence 582 BP; 179 A; 119 C; 148 G; 136 T; 0 other;
     atggcagcga ttttgaatct gcaactaaaa gtggacgcag atctgaaagc gttcctggcc        60
     gcagaaggca gaccccttca tggaaagaca ggggcaatcc tggaacagat actggagtcc       120
     atcttcgcga acatagcgat ccaagggacg tcagagcaga cagagttcct ggacctagtg       180
     gtggaagtga agtcaatgga ggaccagaag gtcatcgggt cctacaatct gaaggaggtg       240
     gtcaacttga tcaaagcttt caagactacc tcttcggatc cgaacatcaa caacatgact       300
     ttccgccagg tgtgtgaggc tttcgcaccg gaggcaagga acgggttagt taaattgaaa       360
     tataaagggg ttttcactaa cctctttaca accatgccgg aagtgggaag taagtacccg       420
     gagctgatgt ttgatttcaa taagggtctt aatatgttta tcatgaataa ggcccagcaa       480
     aaagtcataa ctaataagaa ccggcgtctt ttacaaactg aagttgcaaa aaatgagaat       540
     gaggcgaagc tctcgtctgt tacaactgat ctttgcattt ag                          582
//