ID KC342220; SV 1; linear; genomic DNA; STD; VRL; 2741 BP. XX AC KC342220; XX DT 06-MAR-2013 (Rel. 116, Created) DT 11-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Okra enation leaf curl virus isolate Surat AV2, coat protein, AC5, Ren, DE TrAP, Rep, and AC4 genes, complete cds. XX KW . XX OS Okra enation leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2741 RX DOI; 10.1007/s11262-013-0898-y. RX PUBMED; 23475199. RA Chandran S.A., Packialakshmi R.M., Subhalakshmi K., Prakash C., RA Poovannan K., Nixon Prabu A., Gopal P., Usha R.; RT "First report of an alphasatellite associated with Okra enation leaf curl RT virus"; RL Virus Genes 46(3):585-587(2013). XX RN [2] RP 1-2741 RA Chandran S.A., Packialakshmi R.M., Gopal P., Poovannan K., Prabu A.N., RA Usha R.; RT ; RL Submitted (14-DEC-2012) to the INSDC. RL Plant Biotechnology, Madurai Kamaraj University, School of Biotechnology, RL Madurai, Tamil Nadu 625021, India XX DR MD5; 674454d4f828da4ae74243ef81e463b5. XX CC ##Assembly-Data-START## CC Assembly Method :: EMBOSS GUI v. 6.5.0 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2741 FT /organism="Okra enation leaf curl virus" FT /host="Abelmoschus esculentus" FT /isolate="Surat" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="01-Jun-2011" FT /db_xref="taxon:908125" FT CDS 121..468 FT /codon_start=1 FT /product="AV2" FT /db_xref="GOA:M1KZR3" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M1KZR3" FT /protein_id="AGG37194.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQQLSEEYSPDTVGYDLIRDL FT ISILRCRNYVEASCRYRHFYPRVEGASSTELRQPVFNPCSCPHCPRHKITNVGQQTHVP FT EAQNVQDVQKP" FT CDS 281..1051 FT /codon_start=1 FT /product="coat protein" FT /note="AV1" FT /db_xref="GOA:M1KZQ6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:M1KZQ6" FT /protein_id="AGG37195.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYSTRAVAPTVRVTKSRMWA FT NRPMYRKPRMYRMYRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGMGLTHR FT VGKRFCVKSLYFVGKIWMDENIKTKNHTNTVMFWIVRDRRPTGTPYDFQQVFNVYDNEP FT STATVKNDQRDRFQVLRRFQATVTGGQYACKEQVPIRKFYRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT CDS complement(617..985) FT /codon_start=1 FT /product="AC5" FT /db_xref="GOA:M1SW49" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:M1SW49" FT /protein_id="AGG37199.1" FT /translation="MSTCHIQQQSILSVIFILPSFLVIIHHVIVNTIEFPNWNLFLTSI FT LSSCNCRLKPPQNLESITLVVLYSSRRRLVVINIEHLLEIVGGACRTPVSHDPKHNGVR FT MVLSLNILIHPYLANKIQ" FT CDS complement(1054..1458) FT /codon_start=1 FT /product="Ren" FT /note="AC3" FT /db_xref="GOA:M1S020" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M1S020" FT /protein_id="AGG37196.1" FT /translation="MDSRTGERITAAHTRNGVFIWEVPNPLYFKILSHDDRPFTTNMDI FT IKIRIQFNYNLRRALGVHKCFLTFRVWTTLHPQTGLFLRVFKTQVLKYLNNLGVISINL FT VIKAVEHVLYNVIQQTMYVDQYSDIKLDLY" FT CDS complement(1151..1603) FT /codon_start=1 FT /product="TrAP" FT /note="AC2" FT /db_xref="GOA:M1LGF5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M1LGF5" FT /protein_id="AGG37197.1" FT /translation="MRSSSPLKDHCTQVPIKVQHREAKRAHRRKRVDLECGCSYYLSIN FT CFNHGFSHRGTHHCSSYKEWRLYLGGSKSPLFQDPQPRRPSIHDEHGHNKNQDPIQLQP FT SESSGSAQVFSDLPGLDDLTPSDWSFLKGIQNPSPQVSQQSRCNLN" FT CDS complement(1500..2588) FT /codon_start=1 FT /product="Rep" FT /note="AC1" FT /db_xref="GOA:M1SPT8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M1SPT8" FT /protein_id="AGG37200.1" FT /translation="MPPKRFIINSKNYFLTYPKCSLTKEEALSQIKNFQTPTSKKYIKI FT CRELHENGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYID FT KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDYVLQFHN FT LNANLDRIFTPPVEVYVSPFSSSSFDQVPEELEEWAAENVVDAAARPHRPQSIVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHFLKHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNSAIKNWAVKNAIFVTLEGPLY FT SGTNQSTAQGSEESAQEEESRS" FT CDS complement(2132..2440) FT /codon_start=1 FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M1KZR9" FT /protein_id="AGG37198.1" FT /translation="MKMGNLICTCSSSSRGNTSARISDSSTWSPQAGQHISIRTYRELN FT PAPTSNPTSTRTGTLSSGESFRSTDDLLEGDNRQPTTLTPQRLTQAVSQRLLESLRS" XX SQ Sequence 2741 BP; 710 A; 576 C; 643 G; 812 T; 0 other; accggatggc cgcgcgattt tttttagtgg tgggtccaga acgcacgacg atgcagactc 60 aaagcttaga taacgctcct ttcgctataa gtacttgcgc actaagtttc aaattgaaac 120 atgtgggatc cattgttaaa cgagttcccc gagacggttc acgggtttcg ttgcatgctt 180 gctattaaat atcttcaaca actgtctgag gaatactctc ctgatacggt tgggtacgat 240 ctaattcgcg atctaatttc tattttacgt tgtaggaatt atgtcgaagc gtcctgccga 300 tatcgtcatt tctacccccg cgtcgaaggt gcgtcgtcga ctgaacttcg acagcccgta 360 ttcaacccgt gcagttgccc ccactgtccg cgtcacaaaa tcacgaatgt gggccaacag 420 acccatgtac cggaagccca gaatgtacag gatgtacaga agccctgatg ttcctagagg 480 atgtgaaggc ccatgtaagg tgcagtcttt tgatgcgaag aacgatattg gtcacatggg 540 taaggttatc tgtctatctg atgttactag gggtatgggg ctgacccatc gagtagggaa 600 acgtttttgc gtgaagtcat tgtattttgt tggcaagata tggatggatg agaatattaa 660 gactaagaac catacgaaca ccgttatgtt ttggatcgtg agagacaggc gtcctacagg 720 caccccctac gatttccagc aagtgttcaa tgtttatgac aacgagcctt ctacggctac 780 tgtaaagaac gaccagcgtg atcgattcca ggttttgagg aggtttcagg cgacagttac 840 aggaggacag tatgcttgta aggaacaagt tccaattagg aaattctatc gtgttaacaa 900 ttacgtggtg tataatcacc aggaagctgg gaagtatgaa aatcacactg agaatgcttt 960 gttgttgtat atggcatgta ctcatgcctc taaccctgtg tatgctactt tgaaagttag 1020 gagttacttc tacgattctg taacgaatta atattaataa agatctaatt ttatatctga 1080 atattgatcc acatacattg tttgttgaat tacattgtac aatacgtgtt ctacagcctt 1140 aattactaaa ttaattgaga ttacacctag attgttgaga tacttgagga cttgggtttt 1200 gaataccctt aagaaaagac cagtctgagg gtgtaaggtc gtccagaccc ggaaggtcag 1260 aaaacacttg tgcactccca gagctctccg aaggttgtag ttgaattgga tcctgatttt 1320 tattatgtcc atgttcgtcg tgaatggacg gtcgtcgtgg ctgaggatct tgaaatagag 1380 gggatttgga acctcccaga taaagacgcc attccttgta tgagctgcag tgatgcgttc 1440 ccctgtgcga gaatccatgg ttgaagcagt taattgatag ataataagaa cacccgcatt 1500 caagatctac tctcttcctc ctgtgcgctc tcttcgcttc cctgtgctgt actttgattg 1560 gtacctgagt acaatggtcc ttcaagggtg acgaagatcg catttttcac tgcccagttc 1620 tttattgctg agttcttatc ctcgtctaag aactctttat aactgctgtt gggaccagga 1680 ttgcagagga agattgttgg tatgccgcct ttaatttgaa ctggctttcc gtactttgtg 1740 ttggattgcc agtccctttg ggcccccatg aattctttaa agtgtttgag gaagtgggga 1800 tctacgtcat caatgacgtt ataccaggcc tcgttactgt agacctttgg actaaggtct 1860 agatgcccac acaaatagtt atgtggaccc agtgatctag cccacatcgt cttcccggta 1920 cgactatctc cctcaatcac tatactttgt ggtctatgtg gccgcgcagc ggcgtcgaca 1980 acgttctcgg cagcccattc ctcaagttct tccggaactt gatcaaaaga agaagaagaa 2040 aaaggagaaa cataaacctc cacaggaggt gtaaaaatcc tatctaaatt agcatttaaa 2100 ttatggaatt gtaatacata atcttttgga gctaactcct taatgactct aagagcctct 2160 gacttactgc ctgcgttaag cgctgcggcg taagcgtcgt tggctgtctg ttgtccccct 2220 ctagcagatc gtccgtcgat ctgaaactct ccccactcga gagtgtcccc gtccttgtcg 2280 atgtaggatt tgacgtcgga gctggattta gctccctgta tgttcggatg gaaatgtgct 2340 gacctgcttg gggagaccag gtcgaagaat cgctgattct ggcacttgta tttcccctcg 2400 aactggatga gcacgtgcag atgaggttcc ccattttcat gaagttctct gcagatttta 2460 atatattttt ttgaagtggg ggtttggaaa ttcttgattt gggaaagtgc ttcttctttg 2520 gtgagagagc acttgggata agtgaggaaa taatttttgg agttaataat gaaacgctta 2580 ggaggcatgt tgactaagat agaggacccg attgaccgct cttgcaactc tcccctgtat 2640 atcgggtctc aatatatagt gagacccaaa tggcaaaatt gtaattgtgg gaataaattc 2700 aaaatcctca cgctccaaaa agcggccatc cgtataatat t 2741 //