ID   KC218930; SV 1; linear; genomic RNA; STD; VRL; 1071 BP.
XX
AC   KC218930;
XX
DT   14-APR-2013 (Rel. 116, Created)
DT   09-AUG-2013 (Rel. 117, Last updated, Version 2)
XX
DE   Cherry necrotic rusty mottle virus isolate 103-13 coat protein and
DE   hypothetical protein genes, complete cds.
XX
KW   .
XX
OS   Cherry necrotic rusty mottle virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae;
OC   Robigovirus.
XX
RN   [1]
RP   1-1071
RX   DOI; 10.1007/s00705-013-1668-9.
RX   PUBMED; 23525699.
RA   Villamor D.V., Druffel K.L., Eastwell K.C.;
RT   "Complete nucleotide sequence of a virus associated with rusty mottle
RT   disease of sweet cherry (Prunus avium)";
RL   Arch. Virol. 158(8):1805-1810(2013).
XX
RN   [2]
RP   1-1071
RA   Villamor D.V., Druffel K.L., Eastwell K.C.;
RT   ;
RL   Submitted (27-NOV-2012) to the INSDC.
RL   Department of Plant Pathology, Washington State University, 24106 N Bunn
RL   Rd, Prosser, WA 99350, USA
XX
DR   MD5; 0110821c024eb2e2d8eabec636b720ed.
DR   EuropePMC; PMC3723981; 23525699.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1071
FT                   /organism="Cherry necrotic rusty mottle virus"
FT                   /host="Prunus avium"
FT                   /isolate="103-13"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /db_xref="taxon:129143"
FT   CDS             81..884
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF5; 29.8 kDa"
FT                   /db_xref="GOA:M9QZA4"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:M9QZA4"
FT                   /protein_id="AGI62195.1"
FT                   /translation="MADEYELNDDGTFKLDASNNKIPKKKTTGPPPPPSRNEESPSRRS
FT                   DIEVLRARRRRVNFDPKNPTSSPSREFISNIQEKDPTTLNIASDDAVKAIAADWVEHLK
FT                   VPEAETFNCIFDVVWYCYHNSSSDKTKFVGRAKCGVELEELASTIRSYCSLRSFCSKYA
FT                   PVIWDFAISNDIPPANWQRRKVVEGAKFAAFDFFEAVTSAAALQPVAGLVRNPTDKEMI
FT                   AGASLKEISLMRDEIRRGTSSTLMTEVTGGRTGQVQPIKRIGSDE"
FT   CDS             88..576
FT                   /codon_start=1
FT                   /product="hypothetical protein"
FT                   /note="ORF5a; 18.0 kDa"
FT                   /db_xref="UniProtKB/TrEMBL:M9QXQ2"
FT                   /protein_id="AGI62196.1"
FT                   /translation="MSMSSMTMEPSNSMLQTTKSRRRRRLGRPLLHPEMRKVLQEGVIS
FT                   KCLEPEEEGSTLIQRIPPQVLAESLSATFRKKTLPLLTSLPMMPSRPLQQTGLNTSRCL
FT                   RLKHSIAFLMLSGTAITTVQAIRQNSLVGQSVGLSLRSWQALLGATVLYVAFAQSMHQ"
FT   3'UTR           885..1071
FT   polyA_site      1071
XX
SQ   Sequence 1071 BP; 312 A; 217 C; 244 G; 298 T; 0 other;
     ctcattcaca tagcttaggt ttttagtcac tctatttttg aaaatattag tgtgtgaagg        60
     aactttctgg ctttaatcca atggctgatg agtatgagct caatgacgat ggaaccttca       120
     aactcgatgc ttcaaacaac aaaatcccga agaagaagac gactgggccg ccccctcctc       180
     catccagaaa tgaggaaagt ccttcaagaa ggagtgatat cgaagtgctt agagccagaa       240
     gaagaagggt caactttgat ccaaagaatc ccacctcaag tcctagcaga gagtttatca       300
     gcaacattca ggaaaaagac cctaccactc ttaacatcgc ttccgatgat gccgtcaagg       360
     ccattgcagc agactgggtt gaacacctca aggtgcctga ggctgaaaca ttcaattgca       420
     tttttgatgt tgtctggtac tgctatcaca acagttcaag cgataagaca aaattcgttg       480
     gtagggcaaa gtgtggggtt gagcttgagg agctggcaag cactattagg agctactgtt       540
     ctctacgtag cttttgctca aagtatgcac cagtgatatg ggattttgct attagcaatg       600
     acataccccc agccaattgg caacggagaa aggttgtgga aggtgcaaag tttgcagctt       660
     ttgacttttt tgaagctgtg actagtgcag cagctttgca accagtggct ggtctggtta       720
     gaaatcccac tgataaagag atgattgccg gggcatctct taaggaaatc agcctgatga       780
     gagatgaaat cagaaggggc acgagctcta ctttgatgac tgaagtcacc ggcggcagaa       840
     ctggccaagt tcaacctatc aaacgtattg gtagtgatga atgataaacc tctgcaatcc       900
     caatcttgat gattggcccg tattacaaca cggggcgaag ctaaagttgt attatcctgc       960
     agttttaatt ttttcctgct ttttccaaat tttaaataaa tttaaagaga ttcatggctt      1020
     aacctgaatc tggctatagg gttttaatat attttccttc agtttcttat g               1071
//