ID KC004111; SV 1; circular; genomic DNA; STD; VRL; 2658 BP. XX AC KC004111; XX DT 21-NOV-2012 (Rel. 114, Created) DT 23-JAN-2013 (Rel. 115, Last updated, Version 2) XX DE Macroptilium yellow spot virus isolate BR:Crb1:11 segment DNA-A, complete DE sequence. XX KW . XX OS Macroptilium yellow spot virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2658 RX PUBMED; 23136367. RA Lima A.T., Sobrinho R.R., Gonzalez-Aguilera J., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT "Synonymous site variation due to recombination explains higher genetic RT variability in begomovirus populations infecting non-cultivated hosts"; RL J. Gen. Virol. 94(Pt 2):418-431(2013). XX RN [2] RP 1-2658 RA Lima A.T., Sobrinho R.R., Aguilera J.G., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT ; RL Submitted (24-OCT-2012) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, Minas Gerais 36570-000, Brazil XX DR MD5; fb248b5dae34f91f356d1efe51f78624. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAMAN v. 4.0 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2658 FT /organism="Macroptilium yellow spot virus" FT /segment="DNA-A" FT /host="Phaseolus vulgaris" FT /isolate="BR:Crb1:11" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2011" FT /clone="RC62" FT /db_xref="taxon:1129034" FT CDS 202..957 FT /codon_start=1 FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:H8ZQU4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:H8ZQU4" FT /protein_id="AFX60684.1" FT /translation="MVKRDAPWRHMAGTSKVSRNNNYSPRGGGGPKNNRASEWVNRPMY FT RKPRIYRMYRTPDVPRGCEGPCKVQSFEQRHDISHVGKVICMSDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYSSPMDFGQVFNMFDNEPSTATI FT KNDLRDRFQVMHRFYAKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSILN" FT CDS complement(954..1352) FT /codon_start=1 FT /product="REN" FT /note="replication-enhancer protein" FT /db_xref="GOA:K7XDR4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K7XDR4" FT /protein_id="AFX60685.1" FT /translation="MDSRTGELITAHQAESGVYIWEISNPLYFKINHVEDPLYTTTRIY FT HVQIRFNHNLRRALALHKAYLNFQVWTTSLRASGTTYLVRFKNLVMLYLDRIGVISLNN FT VIRAVRFATDKSYVNDVLENHEIKFKFY" FT CDS complement(1099..1488) FT /codon_start=1 FT /product="TRAP" FT /note="transactivating protein" FT /db_xref="GOA:K7X007" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:K7X007" FT /protein_id="AFX60687.1" FT /translation="MRNSSSSTPPSIKVQHRAAKKRAIRRRRIDIDCGCSIYVHINCRG FT HGFTHRGTHHCTSGREWRLYLGDIKSPLFQDQPRGGSTIHDNQNIPRPDQVQPQPQESI FT GSPQGISQFPSLDDIPESFWDDIFS" FT CDS complement(1439..2485) FT /codon_start=1 FT /product="REP" FT /note="replication-associated protein" FT /db_xref="GOA:K7WK78" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K7WK78" FT /protein_id="AFX60686.1" FT /translation="MPPPRRFKIQSKNYFLTYPKCSISKEEALAQLLALDTPTNKKYIR FT VCRELHGNGEPHLHALLQFEGKFTCTNCRFFDLRHPSHSNVCHGKYESCKSSSDAKSYI FT EKDGDYVEWGDFQIDGRSARGGQQTVNDTYAKALNASCAEEALQIIKEEQPQHFFLQHH FT NLVANAYRIFQKAPEPWTPPFPLSSFINVPEEMKAWADDYFGRSAAARPERPISIIIEG FT DSRTGKTMWARALGSHNYLSGHLDFNSKVYSNDVQYNVIDDIAPQYLKLKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKSFLDKEENASLRQWTIHNAQFVFLN FT SPLYQSST" FT CDS complement(2071..2328) FT /codon_start=1 FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H8ZQP8" FT /protein_id="AFX60688.1" FT /translation="MGSLISMLCCNSKVSSHARIADSSTCDIPVIQMFVMENTNHASHP FT PTPNHILRRTEITSNGVIFRSTDDLLEEVNRQLTIHMQRR" XX SQ Sequence 2658 BP; 701 A; 548 C; 602 G; 807 T; 0 other; accggatggc cgcgcgattt tttatgggcc ttttcttttg ggctcgttct tttggaccga 60 gtgtatttga attaaagtca gttattttat ttggtccaat gaatatgcgt ctgactagct 120 tagataatga caacttggtc cccaagttgg tggctaacgg gtatatatgt taagaataac 180 tgactaattt tttaattcag aatggttaag cgggacgccc catggcgcca catggcagga 240 acctcaaagg tttcccgcaa taacaactat tctcctcgtg gaggtggagg tccaaaaaac 300 aacagggcct ctgaatgggt taataggccc atgtacagaa agcccaggat atatcggatg 360 tacagaaccc ccgatgtgcc tagagggtgt gaaggcccat gtaaggttca gtcctttgaa 420 caacgacacg atatatccca tgttggtaag gttatctgta tgtctgacgt gacaagaggt 480 aatggtatta cccatcgtgt aggaaaacgt ttttgtgtta agtctgtata tattctaggt 540 aagatatgga tggacgagaa catcaagttg aagaatcaca cgaacagtgt gatgttttgg 600 ttggtcagag acagaagacc ctatagctct cctatggact ttggccaagt gttcaacatg 660 tttgacaatg agcccagtac tgctacgatt aagaacgatc ttcgtgatcg ttttcaagtc 720 atgcatcgat tttatgccaa agtcactggt ggacagtatg cgagcaacga gcaagcaatt 780 gtcaggcgtt tttggaaggt caacaatcat gttgtctaca accaccaaga agcagggaaa 840 tacgagaatc atacggagaa cgccttacta ttgtatatgg catgtactca tgcctctaac 900 cccgtgtatg caactttaaa aattcggatc tatttttatg attcgatact caattaataa 960 aatttgaatt ttatttcatg attctccagt acatcattta catatgactt gtccgttgca 1020 aaacgaacag ctctgattac attgttaagc gaaataacac ctattcggtc taagtacaac 1080 atgactaagt ttttaaatct aactaaatat gtcgtcccag aagctctcag ggatgtcgtc 1140 cagacttgga aattgagata tgccttgtgg agagccaatg ctctcctgag gttgtggttg 1200 aacctgatct ggacgtggta tattctggtt gtcgtgtata gtggatcctc cacgtggttg 1260 atcttgaaat aaaggggatt tgatatctcc cagatataga cgccactctc tgcctgatgt 1320 gcagtgatga gttcccctgt gcgtgaatcc atgtcctctg cagttgatat ggacgtatat 1380 ggagcacccg caatctatgt caattcgtct tctcctgatt gctctcttct tggccgctct 1440 atgttgaact ttgatagagg ggggagttga ggaagacgaa ttgcgcattg tgtatcgtcc 1500 actgtctaag tgatgcgttt tcctctttgt cgaggaatga tttatagctg gcgccctcgc 1560 caggattgca aagcacaatg catgggatac cacctttaat ttgaactggc ttcccgtatt 1620 tgcaattcga ttgccagtcc ttttgagcac ctatcaattc tttccagtgc tttaacttta 1680 gatattgcgg tgcgatgtca tctatcacgt tgtactgcac atcatttgaa tagacctttg 1740 aattgaaatc gaggtgacca ctcaagtaat tatgggaccc caatgcacgt gcccacatgg 1800 tcttgcccgt tcgagagtca ccctcgatga ttatacttat tggtctctcc ggccgcgcag 1860 cggcacttct tccgaaatag tcatctgccc aagctttcat ctcttctggg acattaatga 1920 aagaagagag tggaaacgga ggagtccatg gctccggagc cttttgaaag atacgatatg 1980 cgttagccac aagattgtga tgttggagga agaagtgctg tggttgttcc tcctttatta 2040 tttgaagtgc ttcttcagca caagaagcat ttaacgcctt tgcatatgta tcgttaactg 2100 tctgttgacc tcctcgagca gatcgtccgt cgatctgaaa atcaccccat tcgacgtaat 2160 ctccgtcctt ctcaatatat gatttggcgt cggaggatga cttgcatgat tcgtattttc 2220 catgacaaac atttgaatga ctgggatgtc gcaagtcgaa gaatctgcaa ttcgtgcatg 2280 tgaacttacc ttcgaattgc agcaaagcat ggagatgagg ctccccattt ccgtgtaatt 2340 ctctgcatac acggatatat tttttgtttg taggtgtgtc taaggctaga agttgagcaa 2400 gtgcctcttc tttggagata gagcacttgg gataagtaag gaaataattt ttggactgaa 2460 ttttaaaacg tctgggcggt ggcatatttg tcaataaaga gatgtctcca aatggcactc 2520 ttgtaattat gcgagtgtct ccaattccgc tccgctcaaa cttgctctat caattggaga 2580 ctggagacaa tttatactag aaccctcaat agaacttcta atcgtattca cacacgtggc 2640 ggccatccgt ataatatt 2658 //