ID JX444574; SV 1; circular; genomic DNA; STD; VRL; 2610 BP. XX AC JX444574; XX DT 03-OCT-2012 (Rel. 114, Created) DT 28-MAR-2013 (Rel. 116, Last updated, Version 2) XX DE Squash leaf curl virus isolate Homra segment DNA-B, complete sequence. XX KW . XX OS Squash leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2610 RA Haj Ahmad F., Odeh W., Anfoka G.; RT "First Report on the Association of Squash leaf curl virus and Watermelon RT chlorotic stunt virus with Tomato Yellow Leaf Curl Disease"; RL Plant Dis. 97(3):428-428(2013). XX RN [2] RP 1-2610 RA Anfoka G.H., Haj Ahmad F.W.; RT ; RL Submitted (30-JUL-2012) to the INSDC. RL Department of Biotechnology, Faculty of Agricultural Technology, Al-Balqa' RL Applied University, Al-Salt 19117, Jordan XX DR MD5; 8771d5c43e6a7d8bc5573687b8f42891. XX CC ##Assembly-Data-START## CC Assembly Method :: CLC Main Worbench v. 6.6.2 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2610 FT /organism="Squash leaf curl virus" FT /segment="DNA-B" FT /host="tomato" FT /isolate="Homra" FT /mol_type="genomic DNA" FT /country="Jordan" FT /collection_date="2011" FT /db_xref="taxon:10829" FT CDS 531..1283 FT /codon_start=1 FT /product="BV1" FT /db_xref="GOA:K0E4A2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:K0E4A2" FT /protein_id="AFT90664.1" FT /translation="MYSTSNRRGRSQTQRGSHVRRTGVKRSYGAASGYARRRPNVVLNT FT QVEPRMTTQRVQENQFGPEFVLSQNSALSTFVTYPSYVKSVPNRTRTYIKLKRLRFKGT FT LKIERGQGDTIMDGPISNIEGVFSMVIVVDRKPHVSQSGRLHTFDELFGARIHCHGNLS FT VVPALKDRYYIRHVTKRVVSLEKDTLLIELHGTTHLSNKRYNCWASFSDLERDSCNGVY FT GNITNNALLVYYCWLSDAQSKASNICIV" FT CDS complement(1476..2357) FT /codon_start=1 FT /product="BC1" FT /db_xref="GOA:K0E0C2" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:K0E0C2" FT /protein_id="AFT90665.1" FT /translation="MGSQLVPPPSAFNYIESQRDEFQLSHDLTEIVLQFPSTASQITAR FT LSRSCMKIDHCVIEYRQQVPINASGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVSGSNVHQMTHFAKFKGKLKLSSAKHSVDIPFRAPTVKILT FT KQFSEKDIDFWHVGYGKWERRLVKSASSSRFGLRGPIEINPGESWATKSVIGPTNRNAD FT LDIEEELLPYRELNRLGTNILDPGESASIVGIQRSQSNITMSMSQLNELVRSTVHECIK FT TSCIPSTPKSLS" XX SQ Sequence 2610 BP; 698 A; 550 C; 570 G; 792 T; 0 other; accggatggc cgcccgattt ttggtgtccg cctctttagc ccacggccca ggcccatgtt 60 aagcaaattg ggccgacgtt tgatccgttt aagccgcgcg ccttcttcct ccagggacca 120 cacagcactt tcgaccaatc acgttattat tgacaaacct atttggtatg gatcgtacga 180 catgtgtgga ccactgtcac atggtgctgt gtcagacgct ccactttaat tcaaattggc 240 aaagtgatta tcttcgtctt taatttgtac tgtcacagag tgttggacca tctctgtgca 300 ctatcgacga tgtccttttg ttctatggac ctcgttctgt caatttgaat taatctttag 360 tgctaccaat tacagtttag ctacacagac tagttattgt tcatggattg gttcttcgtc 420 tattaataat tgaaacgcgt aattggctta tgcgtcgaat tcatatatta gacaacacgt 480 gtattattta cacgtatata cgttgtacat tatctctatc atcgttctag atgtattcga 540 cgagcaatag acggggtcga tcgcaaactc agcgaggttc tcatgtacgc cgtacaggtg 600 tcaagcgttc atatggtgca gccagtggtt atgcaaggcg tcgacccaac gtggtattaa 660 atactcaagt tgaaccaaga atgactacac agcgtgttca agagaaccag tttggcccag 720 aatttgtctt gagtcaaaac tcagcgttgt ccacgtttgt aacatatcct agctatgtta 780 agtctgttcc caatcgcaca agaacgtata taaaattgaa acgactgcgt tttaagggaa 840 ctctgaaaat tgaacgtgga caaggtgaca ctattatgga cgggcccatt tctaatattg 900 aaggagtatt ttctatggtc atcgtggttg atcggaaacc acatgttagt caatctggcc 960 gtctacatac atttgatgag ttgtttggcg cgcgtatcca ttgtcacggt aatttatctg 1020 tcgtacctgc tttgaaggac cgttactaca ttagacacgt tacgaagcgt gtggtgtctc 1080 ttgaaaagga cacgttactg attgaactcc atggtacgac acatctgtct aacaagcgtt 1140 ataattgttg ggcatcgttc agtgatcttg aacgggattc atgtaatggc gtttacggta 1200 acataactaa taacgctctg ttagtgtatt actgttggct gtcggatgcc cagtccaagg 1260 catccaacat atgtatcgtt tgaactggac tatttgggat gattaagatt aataaattgc 1320 acaagtcccg caattaaata agaactaaat actgaacagg gctgtttatt ctactattaa 1380 taatggccgc gcagcgcaac actctccaga acatgatgag cgataacatt aacaactaat 1440 atgagcgtaa agcgaactaa taatttaatt gggcattagc ttagggattt tggagtgctc 1500 gggatacaac tggttttaat gcactcatgt acagtggatc taactaattc gttcaactgt 1560 gacattgaca tggtgatgtt cgattgcgac cgttgtattc cgactattga agctgattcc 1620 ccaggatcta agatgttagt tcccaacctg tttagttccc tgtatggaag cagctcttct 1680 tcaatatcta aatccgcatt tctgttagtt gggcctatta cactctttgt ggcccaagat 1740 tcacctggat taatttcaat tgggcctctt agcccaaatc tagatgacga tgcggatttg 1800 accagtcttc tctcccattt gccgtatccc acgtgccaga aatcaatgtc cttttcgcta 1860 aattgttttg taagtatctt tactgtcggt gcccggaaag ggatatcaac ggagtgcttc 1920 gccgacgata gcttcagttt gcccttgaat ttagcgaaat gcgtcatttg atgcacattc 1980 gagcctgaga ctcgatagta taacttccat gggattgggt cttttagaga gaagaacgat 2040 gatgaaaaat agtggagatc tatgttacat cttatcggaa aagtccacga cgcttgcagc 2100 gattcattgt ccgtcatgcg tttgtcgtga atctccacta ttaccgtacc cgatgcgtta 2160 atcggaacct gttgccgata ttctatgacg cagtggtcga ttttcataca actacgactc 2220 agcctcgctg ttatctgaga tgccgtcgag ggaaattgca gaacaatttc cgttaggtcg 2280 tgcgataact gaaattcgtc cctctgcgat tcaatataat taaatgcgct tggaggtgga 2340 actaattgag aacccattag ctcttgtaat aactgaacaa gcaatttaaa tcaggaatcg 2400 cactggaaaa tatgagttca ggatagatat atgcggaacg aagtgagtta gggtttgagt 2460 ggcatatttc gtaaatatgc gtcgggacac caggaggtgt cctctcaact ttctcatatt 2520 gctggtgtcc tggtgtccta tatatacctc aagacacata aagcctctag gggacaccaa 2580 ggggcaaaat cggccatccg caataatatt 2610 //