ID JX415187; SV 1; circular; genomic DNA; STD; VRL; 2691 BP. XX AC JX415187; XX DT 20-MAY-2013 (Rel. 116, Created) DT 20-MAY-2013 (Rel. 116, Last updated, Version 1) XX DE Sida micrantha mosaic virus isolate SiMMV-Santaremensis[BR:GO:Luz780:03] DE segment DNA-A, complete sequence. XX KW . XX OS Sida micrantha mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2691 RX DOI; 10.1094/PHYTO-07-12-0174-R. RX PUBMED; 23489523. RA Barreto S.S., Hallwass M., Aquino O.M., Inoue-Nagata A.K.; RT "A study of weeds as potential inoculum sources for a tomato-infecting RT begomovirus in central Brazil"; RL Phytopathology 103(5):436-444(2013). XX RN [2] RP 1-2691 RA Barreto S.S., Hallwass M., Aquino O.M., Inoue-Nagata A.K.; RT ; RL Submitted (23-JUL-2012) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; 424989d6d001f0660368a921d5af95b1. XX FH Key Location/Qualifiers FH FT source 1..2691 FT /organism="Sida micrantha mosaic virus" FT /segment="DNA-A" FT /host="Sida sp. voucher CNPH:Begomo:780" FT /strain="Santaremensis" FT /isolate="SiMMV-Santaremensis[BR:GO:Luz780:03]" FT /mol_type="genomic DNA" FT /country="Brazil:Goias, Luziania" FT /collected_by="Alice K. Inoue-Nagata" FT /collection_date="2003" FT /clone="780" FT /db_xref="taxon:228897" FT CDS 271..1026 FT /codon_start=1 FT /product="CP" FT /note="V1" FT /db_xref="GOA:R4QDS3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:R4QDS3" FT /protein_id="AGL72223.1" FT /translation="MPKRDPSWRQMAGTSKVSRSTNFSPRGGGGPKYNKASEWVHRPMY FT RKPRIYRMIRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT CDS complement(1023..1421) FT /codon_start=1 FT /product="REn" FT /note="C3" FT /db_xref="GOA:R4QFX9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:R4QFX9" FT /protein_id="AGL72224.1" FT /translation="MDSRTGELITAHQAENGVYIWEIPNPLYFKTYKVEDLLYTRTRVY FT HIQIRFNHNLRRVLGLHKAYLNFQVWTTSLTASGTTYLIRLRRLVMMYLDQLGVITLNN FT VIRAVRFATDKAYVNYVLEDHDIKFKFY" FT CDS complement(1168..1557) FT /codon_start=1 FT /product="Trap" FT /note="C2" FT /db_xref="GOA:R4QN77" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:R4QN77" FT /protein_id="AGL72225.1" FT /translation="MLNSSSSTPPSIKPRHRIAKKRAIRRRRVDLECGCTIYQHLNCTG FT HGFTHRGTHHCTSGREWRIYLGDTKSPVFQDVQGRGLAVHKDASVPHPDTVQPQPQESI FT GSPQGLPELPSLDDFSDSFWNDLFD" FT CDS complement(1478..2557) FT /codon_start=1 FT /product="Rep" FT /note="C1" FT /db_xref="GOA:R4QRF7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:R4QRF7" FT /protein_id="AGL72226.1" FT /translation="MPSAPKRFQIKAKNYFLTYPNCSLSKEEALSQLKTLNTPTNKKFI FT KVCRELHENGEPHLHVLLQFEGNYCCQNQRFFDLVSPTRSTHFHPNIQRAKSSSDVKSY FT VDKDGDTIEWGEFQIDGRSARGGCQTANDAAAEALNAPSKEIALQIIREKLPEKFLFQF FT HNLNSNLDRIFARAPEPWTPPFRLSSFTNVPDEMQEWADDYFGRGSAARPLRPISLIVE FT GGSRTGKTMWARALGPHNYFSGHLDFNSKVYSDQVEYNVIDDVAPHYLKLKHWKELIGA FT QQKWQTNCKYGKPRLIEGGVPSIVLCNPGEGASYKDFLDKEENAALRGWTLHNAKFIFL FT DAPLYQTETQDCQEESHQA" FT CDS complement(2140..2403) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:R4QQL0" FT /protein_id="AGL72227.1" FT /translation="MKMGSLISTCFFNSRATTAAKINDSSTWSPQQGQHISIRTFRELS FT HRPTSSPMSTRTEIRSSGGNSKSTAEVLEAVARQLTTLPQKP" XX SQ Sequence 2691 BP; 656 A; 636 C; 649 G; 750 T; 0 other; accggatggc cgcgcgattt tgcccccccc ccacgtggcg ctctggtggt cgtgcgatct 60 ctctcccccc cactcgcgcg acgtggaact ctggtgtccg cgcgttctcc ccccgcgcgc 120 tctgccttta atttaaatta aaggaaataa ctttcatcag gaccaatgaa attgcgtctt 180 ttaagcctag atatttgcga aagacttggg ccctaagttg tttgacggct atataattaa 240 gtcatgtgtg acgtcaggaa ttgtttcgaa atgcccaagc gggatccctc atggcgccag 300 atggcgggaa cctcaaaggt tagccgctct accaactttt cccctcgtgg aggaggaggc 360 ccaaagtaca acaaggcctc tgaatgggtt cacaggccca tgtataggaa gcccaggata 420 tacaggatga taaggactcc tgatgttcca agaggctgtg aagggccctg taaggtccag 480 tcctacgagc agcgtcacga catctcacat gtcggcaagg tcatgtgcat atctgacgtc 540 acacgtggca acggtataac ccaccgtgtc ggtaagcgtt tctgcgttaa gtctgtgtac 600 attttaggga agatatggat ggacgagaac atcaagctca agaatcacac gaacagtgtc 660 atgttctggt tggtcagaga ccgtagaccg tatggtactc ctatggactt tggccaggtg 720 ttcaacatgt ttgacaacga gcccagcact gctacggtga agaacgatct ccgtgatcgt 780 tatcaagtta tgcacaagtt ctacgccaaa gtcactggtg gtcaatatgc cagcaatgaa 840 caggctctgg tcaagaggtt ctggaaggtc aacaatcatg tggtgtacaa ccaccaggaa 900 gctggcaagt atgagaatca cacggagaat gctttgttac tgtatatggc atgtactcat 960 gcctctaacc ctgtgtatgc aacgcttaag attcggatct acttctacga ttcgataacc 1020 aattaataaa atttgaattt tatatcatga tcttcaagta catagtttac ataggctttg 1080 tcagtggcaa agcgaacagc tctaattaca ttgttaagcg tgattacgcc taattgatct 1140 aagtacatca ttacaaggcg tctaagccta atcaaataag tcgttccaga agctgtcaga 1200 gaagtcgtcc agacttggaa gttcaggtag gccttgtgga gacccaatac tctcctgagg 1260 ttgtggttga accgtatctg gatgtggtac actcgcgtcc ttgtgtacag caagtcctct 1320 accttgtacg tcttgaaata caggggattt ggtatctccc agatatatac gccattctct 1380 gcctgatgtg cagtgatgag ttccccggtg cgtgaatcca tgtcccgtgc agttgaggtg 1440 ttggtatatg gtgcagccgc actcaaggtc cactcgtcta cgcctgatgg ctctcttctt 1500 ggcaatcctg tgtctcggtt tgatagaggg gggcgtcgag gaagatgaat ttagcattgt 1560 ggagtgtcca gcctctcaat gccgcatttt cctctttgtc taggaagtct ttatagctgg 1620 ccccctcccc aggattgcac agcacgattg aagggacccc accttcaatc aaacgaggct 1680 ttccgtactt gcagtttgtc tgccatttct gttgggcccc tattagctct ttccagtgtt 1740 tcaactttag gtaatgcgga gcgacgtcat caatgacgtt atactccact tgatcagaat 1800 atacctttga gttgaaatcc agatggccac tgaagtaatt atgtgggcct aatgctctag 1860 cccacatcgt cttgcccgtt ctgctaccgc cttcaacaat taaacttatg ggcctcaatg 1920 gccgcgcagc ggaacccctc ccaaaataat catcggccca ctcttgcatc tcgtctggca 1980 cgttagtgaa tgaggagagt cgaaacggag gggtccacgg ctccggagcc cttgcaaaaa 2040 tcctatctaa attactattt agattgtgaa actgaaataa gaacttttcc ggcagcttct 2100 cccggattat ctgcaaggcg atttccttgg aaggtgcgtt taaggcttct gcggcagcgt 2160 cgttagctgt ctggcaaccg cctctagcac ttctgccgtc gatttggaat tccccccact 2220 cgatcgtatc tccgtccttg tcgacatagg acttgacgtc ggacgatgac ttagctctct 2280 gaatgttcgg atggaaatgt gttgaccttg ttggggagac caggtcgaag aatcgttgat 2340 tttggcagca gtagttgccc tcgaattgaa gaagcacgtg gagatgaggc tccccatttt 2400 catggagctc tctgcaaacc ttgatgaact tcttatttgt aggagtgttt agggttttta 2460 attgggaaag tgcttcttct ttcgataatg agcaattggg atatgtgagg aaataatttt 2520 tggcttttat ttgaaagcgc tttggagctg atggcatatt tgtaaatatg acccttacta 2580 ccaattggta gctgctctaa aactcatatg aatcggtagt tatggtagct cttatatact 2640 acaacttctt aagggcctaa agggcctaaa gcggccatcc gcactaatat t 2691 //