ID JX181786; SV 1; circular; genomic DNA; STD; VRL; 2742 BP. XX AC JX181786; XX DT 03-SEP-2012 (Rel. 114, Created) DT 03-SEP-2012 (Rel. 114, Last updated, Version 1) XX DE Mesta yellow vein mosaic virus isolate Okra:Ludhiana:2010 segment DNA-A, DE complete sequence. XX KW . XX OS Mesta yellow vein mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2742 RA Hernandez-Zepeda C., Sharma A., Suescun-Bolivar L.P., Brown J.K.; RT "Two newly discovered satellites from okra belong to the Gossypium alpha RT satellite clade: a potential source for genetic diversification of okra and RT cotton infecting begomoviruses"; RL Unpublished. XX RN [2] RP 1-2742 RA Hernandez-Zepeda C., Sharma A., Suescun-Bolivar L.P., Brown J.K.; RT ; RL Submitted (14-JUN-2012) to the INSDC. RL Unidad de Ciencias del Agua, Centro de Investigacion Cientifica de Yucatan, RL Calle 8 no 39 SM64 Mz29 L-1, Cancun, Quintana Roo 77500, Mexico XX DR MD5; a15fbc02e810e3c9fe2d2ea8e318fd0d. XX FH Key Location/Qualifiers FH FT source 1..2742 FT /organism="Mesta yellow vein mosaic virus" FT /segment="DNA-A" FT /host="Abelmoschus esculentus" FT /isolate="Okra:Ludhiana:2010" FT /mol_type="genomic DNA" FT /country="India" FT /collected_by="Abhishek Sharma" FT /collection_date="Jul-2010" FT /db_xref="taxon:360579" FT gene 122..469 FT /gene="V2" FT CDS 122..469 FT /codon_start=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:J7JH86" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:J7JH86" FT /protein_id="AFQ55292.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQQLSEEYSPDTVGYDLIRDL FT ISILRCRNYVEASCRYRHFYPRVEGASSTELRQPVFNPCSCPHCPRRKITNVGQQTHVP FT EAQNVQDIQKP" FT gene 282..1052 FT /gene="V1" FT CDS 282..1052 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:J7JH78" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J7JH78" FT /protein_id="AFQ55287.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYSTRAVAPTVRVAKSRMWA FT NRPMYRKPRMYRIYRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKTKNHTNTVMFWIVRDRRPTGTPYDFQQVFNVYDNEP FT STATVKNDEPDRFQVLRRFQATVTGGQYACKEQVPIRKFYRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT gene complement(1055..1459) FT /gene="C3" FT CDS complement(1055..1459) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancer protein" FT /note="C3; REn" FT /db_xref="GOA:D3HIM9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D3HIM9" FT /protein_id="AFQ55290.1" FT /translation="MDSRTGERITAAHTRNGVFIWEVPNPLYFKILSHDDRPFTTNMDI FT IKIRIQFNYNLRRALGVHKCFLTFRVWTTLHPQTGLFLRVFKTQVLKYLNNLGVISINL FT VIKAVEHVLYNVIQQTMYVDQYSDIKFDLY" FT gene complement(1152..1604) FT /gene="C2" FT CDS complement(1152..1604) FT /codon_start=1 FT /gene="C2" FT /product="transcription activator protein" FT /note="C2; TraP" FT /db_xref="GOA:J7JG99" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J7JG99" FT /protein_id="AFQ55289.1" FT /translation="MRSSSPLKDHCTQVPIKVQHREAKRAHRRKRVDLECGCSYYLSIN FT CFNHGFSHRGTHHCSSYKEWRLYLGGSKSPLFQDPQPRRPSIHDEHGHNKNQDPIQLQP FT SESSGSAQVFSDLPGLDDLTPSDWSFLKGIQNPSTQVSQQSRCNLN" FT gene complement(1501..2589) FT /gene="C1" FT CDS complement(1501..2589) FT /codon_start=1 FT /gene="C1" FT /product="replication associated protein" FT /note="C1; ReP" FT /db_xref="GOA:J7JPZ2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J7JPZ2" FT /protein_id="AFQ55288.1" FT /translation="MPPKRFLINSKNYFLTYPKCSLTKEEALSQIKNFQTPTSKKYIKI FT CRELHENGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYID FT KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDYVLQFHN FT LNANLDRIFTPPVEVYVSPFSSSSFDQVPEELEEWAAENVVDAAARPHRPQSIVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHSLKHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYREFLDEDKNSALKNWAVKNAIFVTLEGPLY FT SGTNQSTAQGSEESAQEEESRS" FT gene complement(2133..2441) FT /gene="C4" FT CDS complement(2133..2441) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D3HIM8" FT /protein_id="AFQ55291.1" FT /translation="MKMGNLICTCSSSSRGNTSARISDSSTWSPQAGQHISIRTYRELN FT PAPTSNPTSTRTGTLSSGESFRSTDDLLEGDNRQPTTLTPQRLTQAVSQRLLESLRS" XX SQ Sequence 2742 BP; 709 A; 577 C; 645 G; 811 T; 0 other; accggatggc cgcgcgattt ttttttagtg gtgggtccag aacgcacgac tatgcagact 60 caaagcttag ataacgctcc tttcgctata agtacttgcg cactaagttt caaattgaaa 120 catgtgggat ccattgttaa acgagttccc tgagacggtt cacgggtttc gttgcatgct 180 tgctattaaa tatcttcaac aactgtctga ggaatactct cctgatacgg ttgggtacga 240 tctaattcgc gatctaattt ctattttacg ttgtaggaat tatgtcgaag cgtcctgccg 300 atatcgtcat ttctaccccc gcgtcgaagg tgcgtcgtcg actgaacttc gacagcccgt 360 attcaacccg tgcagttgcc cccactgtcc gcgtcgcaaa atcacgaatg tgggccaaca 420 gacccatgta ccggaagccc agaatgtaca ggatatacag aagccctgat gttcctagag 480 gatgtgaagg cccatgtaag gtgcagtctt ttgatgcgaa gaacgatatt ggtcacatgg 540 gtaaggttat ctgtctatct gatgttacta ggggtattgg gctgacccat cgagtaggga 600 aacgtttttg cgtgaagtca ttgtattttg ttggcaagat atggatggat gagaatatta 660 agactaagaa ccatacgaac accgttatgt tttggatcgt gagagacagg cgtcctacag 720 gcacccccta cgatttccag caagtgttca atgtttatga caacgagcct tctacggcta 780 ctgtaaagaa cgacgagcct gatcgattcc aggttttgag gaggtttcag gcgacagtta 840 caggaggaca gtatgcttgt aaggaacaag ttccaattag gaaattctat cgtgttaaca 900 attacgtggt gtataatcac caggaagctg ggaagtatga aaatcacact gagaatgctt 960 tgttgttgta tatggcatgt actcatgcct ctaaccctgt gtatgctact ttgaaagtta 1020 ggagttactt ctacgattct gtaacgaatt aatattaata aagatcgaat tttatatctg 1080 aatattgatc cacatacatt gtttgttgaa ttacattgta caatacgtgt tctacagcct 1140 taattactaa attaattgag attacaccta gattgttgag atacttgagt acttgggttt 1200 tgaataccct taagaaaaga ccagtctgag ggtgtaaggt cgtccagacc cggaaggtca 1260 gaaaacactt gtgcactccc agagctctcc gaaggttgta gttgaattgg atcctgattt 1320 ttattatgtc catgttcgtc gtgaatggac ggtcgtcgtg gctgaggatc ttgaaataga 1380 ggggatttgg aacctcccag ataaagacgc cattccttgt atgagctgca gtgatgcgtt 1440 cccctgtgcg agaatccatg gttgaagcag ttaatggata gataataaga acacccgcat 1500 tcaagatcta ctctcttcct cctgtgcgct ctcttcgctt ccctgtgctg tactttgatt 1560 ggtacctgag tacaatggtc cttcaagggt gacgaagatc gcatttttca ctgcccagtt 1620 ctttagtgct gagttcttat cctcgtctaa gaactctcta taactgctgt tgggaccagg 1680 attgcagagg aagattgttg gtatgccgcc tttaatttga actggctttc cgtactttgt 1740 gttggattgc cagtcccttt gggcccccat gaactcttta aagtgtttga gggagtgggg 1800 atctacgtca tcaatgacgt tataccaggc ctcgttactg tagacctttg gactaaggtc 1860 tagatgccca cacaaatagt tatgtggacc cagtgatcta gcccacatcg tcttcccggt 1920 acgactatct ccctcaatca ctatactttg tggtctatgt ggccgcgcag cggcgtcgac 1980 aacgttctcg gcagcccatt cctcaagttc ttccggaact tgatcaaaag aagaagaaga 2040 aaaaggagaa acataaacct ccacaggagg tgtaaaaatc ctatctaaat tagcatttaa 2100 attatggaat tgtaatacat aatcttttgg agctaactcc ttaatgactc taagagcctc 2160 tgacttactg cctgcgttaa gcgctgcggc gtaagcgtcg ttggctgtct gttgtccccc 2220 tctagcagat cgtccgtcga tctgaaactc tccccactcg agagtgtccc cgtccttgtc 2280 gatgtaggat ttgacgtcgg agctggattt agctccctgt atgttcggat ggaaatgtgc 2340 tgacctgctt ggggagacca ggtcgaagaa tcgctgattc tggcacttgt atttcccctc 2400 gaactggatg agcacgtgca gatgaggttc cccattttca tgaagttctc tgcagatttt 2460 aatatatttt tttgaagtgg gggtttggaa attcttgatt tgggaaagtg cttcttcttt 2520 ggtgagagag cacttgggat aagtgaggaa ataatttttg gagttaataa ggaaacgctt 2580 aggaggcatg ttgactaaga tagaggaccc gattgaccgc tcttgcaact ctcccctgta 2640 tatcgggtct caatatatag tgagacccaa atggcaaaat tgtaattgtg ggaataaatt 2700 caaaatcctc acgctccaaa aagcggccat ccgtataata tt 2742 //