ID JX050197; SV 1; circular; genomic DNA; STD; VRL; 2801 BP. XX AC JX050197; XX DT 31-JUL-2012 (Rel. 113, Created) DT 31-JUL-2012 (Rel. 113, Last updated, Version 1) XX DE Sweet potato leaf curl virus isolate SPLCV-ILC:Del segment DNA-A, complete DE sequence. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2801 RA Geetanjali A.S., Shilpi S., Mandal B.; RT "Association of two different betasatellites with Sweet potato leaf curl RT virus in wild morning glory showing two distinct symptom phenotypes"; RL Unpublished. XX RN [2] RP 1-2801 RA Geetanjali A.S., Shilpi S., Mandal B.; RT ; RL Submitted (14-MAY-2012) to the INSDC. RL Plant Virology Unit, Division of Plant Pathology, Indian Agricultural RL Research Institute, Pusa Campus, New Delhi, Delhi 110012, India XX DR MD5; a4a37cfa7ff72df9ba61bd6f8f4b8baa. XX FH Key Location/Qualifiers FH FT source 1..2801 FT /organism="Sweet potato leaf curl virus" FT /segment="DNA-A" FT /host="Ipomoea purpurea (wild morning glory)" FT /isolate="SPLCV-ILC:Del" FT /mol_type="genomic DNA" FT /country="India:bush lands of Indian Agricultural Research FT Institute, New Delhi" FT /isolation_source="leaves showing curling symptoms" FT /collected_by="Dr. Bikash Mandal" FT /collection_date="18-Aug-2009" FT /db_xref="taxon:100755" FT gene 46..441 FT /gene="AV2" FT CDS 46..441 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:I7C0X4" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:I7C0X4" FT /protein_id="AFO64650.1" FT /translation="MTLLYKDQSGFRAWRPSMAELWDPLQNPLPDTLYGFRCMLSVKYL FT QGILKKYEPGTLGFEPRSELIRIFRVRQYDRANSRFAEISSLWGETGKTEAELRDSYRA FT LHWECCPNCCPKLCPGFKRRPDEEKEG" FT gene 266..1030 FT /gene="AV1" FT CDS 266..1030 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:A9QR84" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A9QR84" FT /protein_id="AFO64651.1" FT /translation="MTGRIRVSPRYHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKIQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLLRDRRPNKDPLNFGQVFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALVRKFFKGLYNHVTYNHKEEAKYENQLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT gene complement(1047..1481) FT /gene="AC3" FT CDS complement(1047..1481) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /note="Ren" FT /db_xref="GOA:I7CY37" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:I7CY37" FT /protein_id="AFO64652.1" FT /translation="MGSRTEESLSRAQTTKAQEFHTNPMSVGRTARFLFIIVFATKSTT FT GETILKFQVMVNYKERRQLGFHKIFLQFRILTTPLTGAFHSWTGILERLKRRIGNELAN FT LGFFLLVNLVYVIRHLPESVKWIDVIDTVDCNDDVKVLLY" FT gene complement(1198..1644) FT /gene="AC2" FT CDS complement(1198..1644) FT /codon_start=1 FT /gene="AC2" FT /product="trans-activating protein" FT /note="Trap" FT /db_xref="GOA:I7CAL7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:I7CAL7" FT /protein_id="AFO64653.1" FT /translation="MSNPLFGYKRKCPIQEPLHTEAKKAKRKVPEQRTRIVWKGGGCSA FT FITPTCKYQHGFTHRGITKSCSDYESPGIPHQPHVRGPNCTVSFYNSICHKEHNGGNNP FT QIPGDGQLQGKEATGISQNFPPIPDIDDPFNWCFSQLDWYFGTP" FT gene complement(1553..2647) FT /gene="AC1" FT CDS complement(1553..2647) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /note="Rep" FT /db_xref="GOA:I7CY26" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I7CY26" FT /protein_id="AFO64654.1" FT /translation="MAPPKRFKIQAKNYFITYPRCSLSKEDCLSQLLNIQTPTNKKYIH FT IAKELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYV FT DKDGDTLIWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQYH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQEALKNWATANAIFCDVQSPF FT WVQEEVSHSGATAHRGEEGQEESS" FT gene complement(2233..2661) FT /gene="AC4" FT CDS complement(2233..2661) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:I7CAK8" FT /protein_id="AFO64655.1" FT /translation="MGVSKWLLRSALKSKPKIISLLIHAVLSLKRTASPNYLTSKPQQT FT KNTYTSPKNCTKMGNLTSMCWCSSKANSSAQIADSSTLYHPQGRLTFTPTSRELNPRPM FT SSPTLIRTGIPSSGVNSRSTADLLEEVSRLLTTQPQRL" XX SQ Sequence 2801 BP; 738 A; 591 C; 677 G; 795 T; 0 other; accggtgccc gccgcgcctc cttttgtggg ccccacaaga gaataatgac attgctttat 60 aaggaccaat caggtttccg tgcttggcgc ccaagtatgg ctgaattgtg ggaccctctc 120 cagaacccac taccagatac tttatacggt ttcaggtgta tgctctccgt aaaataccta 180 caaggtattt tgaagaaata cgagccagga accctagggt tcgagcctcg ttcggagtta 240 atccgtatat tcagggtcag gcagtatgac cgggcgaatt cgcgtttcgc cgagatatca 300 tccctatggg gggagaccgg taagacggag gctgaacttc gagacagcta tcgtgcccta 360 cactgggaat gctgtcccaa ttgctgcccg aagctatgtc ccggtttcaa gaggcgtccg 420 gatgaagaga aagaggggtg accgcatccc gaagggatgt gtcggtccat gtaagatcca 480 ggactatgag ttcaagatgg acgttcccca cacgggaacg tttgtctgtg tctcggattt 540 tacaaggggg actgggctta cccatcgcct gggtaagcgt gtttgtatta agtccatggg 600 tatagatggg aaggtatgga tggatgacaa tgtggccaag agagatcaca ccaacatcat 660 cacgtattgg ttgcttcgtg atcgacggcc caataaggac ccgctgaact ttggtcaggt 720 tttcactatg tacgacaacg agcccactac tgctaagatc cgaatggatc tgagggatag 780 aatgcaggtg ttgaagaagt tctctgttac agtttcaggt ggtccataca gccacaagga 840 acaggcttta gttaggaagt tctttaaggg tttgtataat catgttactt acaatcacaa 900 ggaagaagct aagtatgaga atcagttaga gaatgctttg atgttgtata gtgctagtag 960 tcatgctagt aatcctgtgt atcagaccct gcgttgcagg gcttatttct atgattcgca 1020 taataattaa taaaattata tttttattaa tacagtaata cctttacatc atcattgcaa 1080 tctacagtat ctattacatc tatccattta actgattcag gcaaatgcct aattacataa 1140 actaaattaa ctaagagaaa aaaacctaaa tttgctaatt catttcctat tcgccgttta 1200 aggcgttcca aaataccagt ccaactgtga aaagcaccag ttaaaggggt cgtcaatatc 1260 cggaattgga ggaaaatttt gtgaaatccc agttgcctcc tttccttgta attgaccatc 1320 acctggaatt tgaggattgt ttcccccgtt gtgctctttg tggcaaatac tattataaaa 1380 agaaaccgtg cagttcggcc cacggacatg gggttggtgt ggaattcctg ggctttcgta 1440 gtctgagcac gacttagtga ttcctctgtg cgtgaaccca tgctggtact tgcaggttgg 1500 ggtgatgaag gctgaacagc ccccaccttt ccacactatt ctcgtcctct gttcaggaac 1560 tttcctcttg gccttcttcg cctctgtgtg cagtggctcc tgaatgggac acttcctctt 1620 gtacccaaaa aggggattgg acatcgcaga atatagcgtt tgctgttgcc caatttttga 1680 gtgcttcctg ctctggtttg tccaaccaga gtttaaatga ggagccctct cctggattgc 1740 agaggaagat agtgggaatt ccacctttaa tttgaactgg cttcccgtac ttacagttgg 1800 attgccagtc cttctgggcc cccatgaatt ccttaaagtg ctttaggtat tgggggttga 1860 cgtcatcaat gacgttatac caagcactgt tgctgtacac tttagggctt agatccaaat 1920 gcccacacaa ataattgtga gggcccaaag acctagccca tactgttttg cctattctgc 1980 ttgggccttc aataacaatg gatatgggtc tatccggccg cgcagcggaa tccatgacat 2040 tttcagcggc ccagtcgctg ataatgtcag gaacggcatt gaaagaagaa gaagaaaaag 2100 gagaagaata tactgaagga ggaggagaaa aaatcctatc taaattacta actaaattat 2160 gatattgaaa taaatatttt tcagggagtt tctccctgat tatttgtaac gcagcttctt 2220 tagaacctgc gtttagagcc tctgcggctg cgtcgttagc agtctgctga cctcctctag 2280 cagatctgcc gtcgacctgg aattcacccc agatgagggt atccccgtcc ttatcaacgt 2340 aggacttgac atcggacgag gatttagctc cctggatgtt ggggtgaaag tgagtcgacc 2400 ttgtgggtga tacaaggtcg aagaatctgc tatttgtgca gacgaatttg ccttcgaact 2460 gcaccagcac atggaggtga ggttccccat cttcgtgcaa ttctttggcg atgtgtatgt 2520 attttttgtt tgttggggtt tggatgttaa gtagttggga gaggcagtcc tctttagaga 2580 gagaacagcg tggataagta atgaaataat ttttggcttg gattttaaag cgcttcggag 2640 gagccatttg gagacaccca taagttcaaa tgaattggag actggagaca atatatagta 2700 tgtctccaaa tggcattatg gtaatttaga agatcctttt agctttaatt caaattccga 2760 caactatggg accaccaaaa ggcgggcacc gtattaatat t 2801 //