ID   JX047243; SV 1; linear; genomic RNA; STD; VRL; 1936 BP.
XX
AC   JX047243;
XX
DT   31-MAY-2013 (Rel. 116, Created)
DT   12-DEC-2013 (Rel. 119, Last updated, Version 3)
XX
DE   Rice black streaked dwarf virus isolate SDTA1 P8 gene, complete cds.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1936
RX   DOI; 10.1007/s00705-013-1766-8.
RX   PUBMED; 23807744.
RA   Yin X., Zheng F.Q., Tang W., Zhu Q.Q., Li X.D., Zhang G.M., Liu H.T.,
RA   Liu B.S.;
RT   "Genetic structure of rice black-streaked dwarf virus populations in
RT   China";
RL   Arch. Virol. 158(12):2505-2515(2013).
XX
RN   [2]
RP   1-1936
RA   Yin X., Li X.D.;
RT   ;
RL   Submitted (10-MAY-2012) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, 61 Daizong
RL   Street, Tai'an, Shandong 271018, China
XX
DR   MD5; 370b6586f172afc682a9a36b97c78124.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1936
FT                   /organism="Rice black streaked dwarf virus"
FT                   /segment="8"
FT                   /host="Zea mays"
FT                   /isolate="SDTA1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2008"
FT                   /db_xref="taxon:10990"
FT   CDS             25..1800
FT                   /codon_start=1
FT                   /product="P8"
FT                   /note="minor core protein"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:R4IWW1"
FT                   /protein_id="AGE44090.1"
FT                   /translation="MTGTHDDRISLRLLFFNLWNKKRPNDPINHRKTKKKLKPQTANPT
FT                   SNPILVSPSITDYAEQISDEFAKARKPILVPTQIFSAFTRLETIFNRTGSYPDLFSNPI
FT                   KYLGFLIFMPDVSIHLDPPTVDHSYYNLKRNHKMSFDELQSNLTSRMLTGQIVKTETND
FT                   LAERFETYYFDPRCERTSVGFLKRSAIVRFEFLSYKYNNDLTMSEREKLPVWASHLIAR
FT                   MNVENVSLPLEISCSAINPTQHFAVIVLKNAKTNVTRGRFWTVLDDERDFLSVKTDLQA
FT                   IEFERNSVTTAGNLRHVLNNCLTLGEPFAFDPLDYSFKINLLETGLSPLDDVVTIRLKD
FT                   LLRVFKEGQDVQIIGNKGVGKSEIGVMLSELYPHLLVVDSDDYGRFLVMLLNLVPSLFK
FT                   NFDFEINEELLTEEIYFQAMSDFIKAKQTEDVSLQTIFEYVMEGIILPNTIESGEANEE
FT                   VILDIFNRVFHSIQGSKFIGYRKFMIEYTRLMYTNFNKSQTCHFVHSYCELSFVPHSLA
FT                   YITLYSSYNSAVLNVVPRNGQVECSASKMMANTLLHHFYERYTSNMNPTPVFLFSYFFG
FT                   LTKGLNVLKASSIIV"
XX
SQ   Sequence 1936 BP; 610 A; 338 C; 332 G; 656 T; 0 other;
     aagttttttt cgcactgtct aaagatgact ggcacccatg acgaccggat ttctttaaga        60
     cttttattct tcaacttatg gaacaaaaaa cgaccaaacg acccaatcaa ccaccgaaaa       120
     acgaagaaaa agctaaaacc tcaaacagca aatcctacat caaaccccat tttggtatcc       180
     ccttcaatta ctgattatgc tgaacaaata tcagacgaat ttgctaaggc tcgaaaaccg       240
     attttggtcc cgactcaaat attttccgct ttcactagac ttgaaacgat tttcaacaga       300
     acaggctctt atcctgattt gttcagtaat ccaatcaaat acctcggatt tttaatcttc       360
     atgcccgatg tttcaataca tttagaccct cccactgtag atcattcata ttataatttg       420
     aagagaaatc ataaaatgag ttttgacgaa cttcaatcaa atttaacttc acgaatgtta       480
     actggccaaa ttgtgaaaac tgagactaac gatcttgcgg aacgtttcga aacttactac       540
     tttgatccta gatgtgaaag aacaagcgtt ggatttttga aaagaagcgc gatcgttaga       600
     tttgaattcc tatcttataa atacaataat gatttaacaa tgtcagaacg tgaaaaatta       660
     cctgtttggg cttctcattt aatagctcgc atgaatgtgg aaaacgtttc gttaccattg       720
     gaaataagtt gcagtgcaat caatcccacc caacattttg cagttatagt tcttaaaaat       780
     gctaaaacca atgtaacaag aggtagattc tggaccgtgt tggacgatga acgcgacttt       840
     ttatctgtca aaaccgatct tcaagcgatt gaatttgaac gtaattccgt aaccactgct       900
     ggaaatttaa gacatgtttt aaacaattgc ttaacattag gcgaaccctt cgccttcgac       960
     ccacttgact attcttttaa aatcaactta cttgaaacag gattatcccc attagatgac      1020
     gttgtgacta ttagattgaa agatttgctg cgtgtgttca aagaagggca agatgttcaa      1080
     attattggta ataaaggagt aggtaagtct gaaattggcg taatgttgtc agaactatat      1140
     cctcatcttt tagttgttga tagtgatgat tatggtaggt ttttggtgat gttacttaat      1200
     ttggttcctt cattgtttaa aaattttgat tttgaaatta acgaagaact tttaactgaa      1260
     gaaatctatt ttcaagctat gtctgacttt attaaagcta agcaaactga agatgtttca      1320
     cttcaaacga tttttgagta tgtgatggaa ggaataattc ttcctaacac cattgagagt      1380
     ggagaagcta atgaagaagt tattttggac atttttaatc gtgtttttca cagcatccaa      1440
     ggttctaaat ttattggata tcgtaagttc atgattgaat atacgcgtct gatgtacact      1500
     aattttaaca agagtcaaac ttgtcatttc gtccattctt attgtgaatt atcattcgtt      1560
     cctcattctt tggcttatat tactttatac agtagctaca actcagctgt gttaaatgtt      1620
     gttcctagaa acggacaagt ggaatgtagt gcttcaaaga tgatggccaa tacgttactt      1680
     catcattttt atgaaagata tacttctaat atgaatccaa ctccagtatt tttgttttct      1740
     tatttctttg gtttaaccaa aggtttaaac gttctaaaag cttcatcgat tattgtataa      1800
     cattattgtg cttttgtgaa gaatatcacg tccttttagg gttcgattcg tataaaggtg      1860
     tttcagtcca atatcttgat ggcagactag gtcgattttt gattctagtg aagtgtgcga      1920
     aaattcagct attgtc                                                      1936
//