ID   JQ928344; SV 1; linear; genomic DNA; STD; VRL; 1180 BP.
XX
AC   JQ928344;
XX
DT   03-OCT-2012 (Rel. 114, Created)
DT   03-OCT-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Tomato yellow leaf curl virus isolate FD replication-associated protein
DE   (C1) gene, partial cds; C4 protein (C4) gene, complete cds; and precoat
DE   protein (V2) and coat protein (V1) genes, partial cds.
XX
KW   .
XX
OS   Tomato yellow leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1180
RA   Gharouni Kardani S., Jafarpour B., Mehrvar M., Heydarnejad J., Tarighi S.,
RA   Zaki Aghl M.;
RT   "Genetic diversity of TYLCV in Iran";
RL   Unpublished.
XX
RN   [2]
RP   1-1180
RA   Gharouni Kardani S., Jafarpour B., Mehrvar M., Heydarnejad J., Tarighi S.,
RA   Zaki Aghl M.;
RT   ;
RL   Submitted (10-APR-2012) to the INSDC.
RL   Plant Protection, Ferdowsi University, Azadi Square, Mashhad, Khorasan
RL   Razavi 9177948978, Iran
XX
DR   MD5; ef3c12ce0ab3a1d73844365ac0c007c9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1180
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="FD"
FT                   /mol_type="genomic DNA"
FT                   /country="Iran:Khorasan Razavi province, Neyshabur,
FT                   Fadisheh"
FT                   /collected_by="Sara Gharouni Kardani"
FT                   /collection_date="31-Dec-2009"
FT                   /db_xref="taxon:10832"
FT   gene            complement(<1..607)
FT                   /gene="C1"
FT   CDS             complement(<1..607)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="replication-associated protein"
FT                   /db_xref="GOA:K0DDU1"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:K0DDU1"
FT                   /protein_id="AFT83000.1"
FT                   /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLLALNTPTNKKFIRVA
FT                   HELHEDGSPHLHVLIQFEGKYQCKNQRFFDLSSPSRSAHFHPNIQAAKSSTDVKTYVEK
FT                   DGDFIDFGIFQIDGRSARGGQQSANDAYAEALNSGRKSEALNILKEKAPKDYILQFHNL
FT                   SSNLDRIFQEPPAPYISPFLSSSFNQVPDELEVWVSENV"
FT   gene            complement(163..471)
FT                   /gene="C4"
FT   CDS             complement(163..471)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:I1VX08"
FT                   /protein_id="AFT83001.1"
FT                   /translation="MNYMKMGLLISMFSSSSKESTSVRTNDSSIYPLQAGQHISIRTFR
FT                   QLRAQQMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPKHSIQAENPRPSIY"
FT   gene            920..>1180
FT                   /gene="V2"
FT   CDS             920..>1180
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="precoat protein"
FT                   /db_xref="GOA:K0DH14"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="UniProtKB/TrEMBL:K0DH14"
FT                   /protein_id="AFT83002.1"
FT                   /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLVRDL
FT                   ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCP"
FT   gene            1080..>1180
FT                   /gene="V1"
FT   CDS             1080..>1180
FT                   /codon_start=1
FT                   /gene="V1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0DDV0"
FT                   /db_xref="UniProtKB/TrEMBL:K0DDV0"
FT                   /protein_id="AFT83003.1"
FT                   /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVP"
XX
SQ   Sequence 1180 BP; 329 A; 233 C; 252 G; 366 T; 0 other;
     tgacgttctc tgacacccat acttcaagtt catctggaac ttgattaaaa gatgaagata        60
     aaaagggaga aatataagga gccggaggct cttgaaaaat cctatctaaa tttgaactta       120
     aattatgaaa ttgtaaaata taatcctttg gggccttctc tttcaatata ttgagggcct       180
     cggattttct gcctgaattg agtgcttcgg catatgcgtc gttggcagat tgctgacctc       240
     ctctagctga tctgccatcg atttggaaaa ttccaaaatc aatgaagtct ccgtctttct       300
     ccacgtaggt cttgacatct gttgagctct tagctgcctg aatgttcgga tggaaatgtg       360
     ctgacctgct tggagaggat aaatcgaaga atcgttggtt cttacactgg tactttcctt       420
     cgaactggat gagaacatgg agatgaggag acccatcttc atgtagttca tgcgcaactc       480
     gtatgaattt cttgttagtt ggtgtattta gggcaagtaa ttgggaaagt gcttcttctt       540
     tagagagaga acaattagga taagtcagga aataattttt ggcatatatt ttaaatagac       600
     gaggcatggt gaaatgaatc ggtgtccctc aaaactctat ggcaatcggt gtatccggtg       660
     tcttacttat acctagacac ccaatggcta tttggtaatt tcgtaaaagt aaatgtaatt       720
     caaaattcaa aattcaaaaa tcaaatcatt aaagcggcca tccgtataat attaccggat       780
     ggccgcgctc ttttttttat gtggtcccca cgagtgttcc gcagaagtca ctgtcaacca       840
     atcaaattgc atcctcaaac gttagataag tattgatttg tctatatata cttggtcccc       900
     aagtattttg tcttgcaata tgtgggaccc acttctaaat gaatttcctg aatctgttca       960
     cggatttcgt tgtatgttag ctattaaata tttgcagtcc gttgaggaaa cttacgagcc      1020
     caatacattg ggccacgatt tagttaggga tcttatatct gttgtaaggg cccgtgacta      1080
     tgtcgaagcg accaggcgat ataatcattt ccacgcccgt ctcgaaggtt cgccgaaggc      1140
     tgaacttcga cagcccatac agcagccgtg ctgctgtccc                            1180
//