ID JQ714138; SV 2; circular; genomic DNA; STD; VRL; 2560 BP. XX AC JQ714138; XX DT 29-MAY-2013 (Rel. 116, Created) DT 12-OCT-2014 (Rel. 122, Last updated, Version 4) XX DE Tomato mottle wrinkle virus isolate Ar:Pichanal:400 segment DNA-B, complete DE sequence. XX KW . XX OS Tomato mottle wrinkle virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-2560 RX PUBMED; 25252814. RA Vaghi Medina C.G., Martin D.P., Lopez Lambertini P.M.; RT "Tomato mottle wrinkle virus, a recombinant begomovirus infecting tomato in RT Argentina"; RL Arch. Virol. 0:0(2014). XX RN [2] RP 1-2560 RA Vaghi Medina C.G., Lopez Lambertini P.M.; RT ; RL Submitted (17-FEB-2012) to the INSDC. RL Instituto de Patologia Vegetal, INTA-CIAP, Camino 60 Cuadras Km 5 1/2, RL Cordoba X5020ICA, Argentina XX RN [3] RC Sequence update by submitter RP 1-2560 RA Vaghi Medina C.G., Lopez Lambertini P.M.; RT ; RL Submitted (29-JUL-2014) to the INSDC. RL Instituto de Patologia Vegetal, INTA-CIAP, Camino 60 Cuadras Km 5 1/2, RL Cordoba X5020ICA, Argentina XX DR MD5; bfb9f86ec0c69fb6aec4e086cf462b75. XX CC On Jul 29, 2014 this sequence version replaced gi:428621903. XX FH Key Location/Qualifiers FH FT source 1..2560 FT /organism="Tomato mottle wrinkle virus" FT /segment="DNA-B" FT /host="tomato" FT /isolate="Ar:Pichanal:400" FT /mol_type="genomic DNA" FT /country="Argentina" FT /collection_date="2008" FT /db_xref="taxon:1266458" FT gene 381..1151 FT /gene="BV1" FT CDS 381..1151 FT /codon_start=1 FT /gene="BV1" FT /product="NSP" FT /note="nuclear shuttle protein" FT /db_xref="GOA:R4IQU2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:R4IQU2" FT /protein_id="AFZ40234.1" FT /translation="MYPTKYKRNWSSNQRRGYSRQSFFKRSYYFKRTDGKRRSNSSVQV FT NEDDKLSQQRIHENQFGPDFVMGHNSAVSTFITFPTLSKIEPNRSRSYIKLKRLRFKGT FT VKIERLQTDMKMDCVIPSIEGVFSLVIVVDRKPHLSPTGCLHTFDELFGARIHSHGNLA FT ISSSLKDRFYIRHVWKKVISVEKDSTMVDLEGTTSLSNKRYNCWSGFKDLDRDSCNGVY FT ANISKNALLVYYCWMSDIMSTASSFVSFDLDYVG" FT gene complement(1308..2189) FT /gene="BC1" FT CDS complement(1308..2189) FT /codon_start=1 FT /gene="BC1" FT /product="MP" FT /note="movement protein" FT /db_xref="GOA:R4IQV9" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:R4IQV9" FT /protein_id="AFZ40235.2" FT /translation="MDSQVVCPPNAFNYIESRRDEYQLSHDLTEIILQFPSKATQLSAR FT LNRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTENESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYKVCDSNVHQMTHFAKFKGKLKLSTAKHSVDIPFRAPTVKIMS FT KQFTVNDIDFSHVGYGKWERKLIRSASTSRFGLPGPIELNPGESWATRSTIGPAQLDTE FT SEVGDSLHPYKDLNRLGTAILDPGESASIIGAQRTQSNITMSMAQLNEIVRSTVQECIK FT TNCIPAQPKSLK" XX SQ Sequence 2560 BP; 769 A; 409 C; 520 G; 862 T; 0 other; accggatggc cgcgcgattt tttttggtgg gtccctctct attttaattg agcgcatttt 60 tgacgtccgc gaatttagtt gagcgcaaat tttgagatcc gccaatagcg ttagtggtat 120 aactttaatt tgaaataaag agcaactttg tgtttagcca atcatattgc gtctaagaag 180 actagttgtg tattactttg atatcatttc aaacttgaat attattggtc agtcttacca 240 ctatggggta catttataac atttatgtca ttgtcaatat attatatgtg catgacgtgt 300 accaattaaa tatttgctat gcagttaaga aatgttataa atgaatctgc aatacattgt 360 tatggatata atatctgatc atgtatccta ctaagtataa acgtaattgg tcatctaatc 420 aacgaagagg ttattcacgt caatcattct tcaaacgttc ttattatttt aagcgtacag 480 atgggaaacg tcgatcaaat agttcagtcc aggtgaatga ggatgataaa ttatcacaac 540 agcggataca tgagaaccag tttggcccag attttgttat gggtcataat agtgccgtgt 600 ctactttcat cactttccct actctcagta aaattgagcc taaccggtca aggtcatata 660 ttaagttgaa acgcttacgt ttcaaaggta ctgttaaaat tgaacggttg caaactgata 720 tgaaaatgga ctgtgtaatt ccaagtattg aaggggtctt ttcgctggtt atcgtcgttg 780 atcgtaaacc ccatttgagc ccaacaggat gtctgcatac atttgatgag ctctttggtg 840 cacggatcca cagtcatggc aatttggcta taagttcatc gttgaaggac cgcttttaca 900 tacgtcatgt ttggaagaaa gtaatatctg tcgagaagga tagcacgatg gttgatcttg 960 aaggaacgac atcactatct aacaagcgtt ataattgttg gtctggtttt aaggatcttg 1020 atcgtgattc ctgtaatggg gtttatgcga atataagcaa gaacgccctt ttagtttatt 1080 attgttggat gtctgacatc atgtctacag catcctcatt tgtatcgttt gatcttgatt 1140 atgttggtta attaataata ttatgagtta taataaagtc agacttacat aagagattca 1200 atcactcaag aaaacatgta caggaaatta ttaggaataa cacaattaca tttaatatat 1260 attaggctgc gcagctgcac caaaaaaatg ttctagaaag tcagcatcta tttcaaagat 1320 ttgggctgtg caggaataca attagtttta atacactctt ggaccgtcga tctaacaatt 1380 tcgtttaatt gggccattga catagtaatg tttgattgtg ttctttgggc cccaattata 1440 gaagctgact ctcctgggtc taagatggca gtgccaagtc tgttaagatc cttatatgga 1500 tgtaatgagt cacctacttc tgattccgta tctaattggg ccggacctat agtactcctt 1560 gtggcccaag actctcctgg atttagttct attgggcctg gtagcccaaa cctagaagtc 1620 gatgcagatc gtattaattt tctctcccat ttcccatagc ccacatgaga gaagtctata 1680 tcattgactg taaattgctt ggacatgatc tttactgtgg gtgctctgaa aggtatatca 1740 accgaatgtt ttgccgtcga tagcttcaat ttccctttaa attttgcaaa gtgggtcatt 1800 tgatgaacat tcgagtcaca aaccttataa tatagtttcc atggaatagg gtctttgagc 1860 gaaaagaatg atgatgagaa atagtggaga tctatgttgc accttatcgg aaaagtccat 1920 gacgcctgta atgattcatt ttcggtcatt ctcttgtcat ggatctccac aataactgac 1980 cctgttgcgt ttattggtac ttgttgccta tattctatga cgcaatggtc tattttcata 2040 cagcttcgat tcagtcttgc acttaattga gttgctttgg aaggaaattg caatatgatt 2100 tccgttaggt catgagataa ctgatattca tcacgacgag attctatgta attaaaggcg 2160 tttggtgggc aaactacttg tgaatccata tatttgagta aagtaaatag gtaaagatat 2220 taagcaagaa agatttaaga aaattgtagt agtgggagaa aattgaagta gtgagagaaa 2280 aattgatttt gaagatatga caatatgaag aagattgcgt ttcttatata gactcacaat 2340 tggatatgga taattatgtt agtgaataat gatataattt aataggtaat ttaagatatg 2400 tgataaatta agtttgataa tggcatatgt gtaaatatag gcttgtaccc cgattgctct 2460 ggcttcaaaa ctctatatga attggggtaa tggggtacaa tatatagtat aagttcttta 2520 gggtttaaat agacacgtgg cggccatccg ttataatatt 2560 //