ID JQ624879; SV 1; circular; genomic DNA; STD; VRL; 2882 BP. XX AC JQ624879; XX DT 10-MAY-2012 (Rel. 112, Created) DT 09-AUG-2012 (Rel. 113, Last updated, Version 3) XX DE Maize streak Reunion virus isolate MSRV-RE_StP_PR52_2009, complete genome. XX KW . XX OS Maize streak Reunion virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2882 RX DOI; 10.1007/s00705-012-1314-y. RX PUBMED; 22543634. RA Pande D., Kraberger S., Lefeuvre P., Lett J.M., Shepherd D.N., Varsani A., RA Martin D.P.; RT "A novel maize-infecting mastrevirus from La Reunion Island"; RL Arch. Virol. 157(8):1617-1621(2012). XX RN [2] RP 1-2882 RA Varsani A., Pande D., Kraberger S., Lett J.-M., Martin D.P.; RT ; RL Submitted (06-FEB-2012) to the INSDC. RL School of Biological Sciences, University of Canterbury, Private Bag 4800, RL Christchurch 8140, New Zealand XX DR MD5; b68cb31258f254615be37024cf4956a8. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2882 FT /organism="Maize streak Reunion virus" FT /host="Zea mays" FT /isolate="MSRV-RE_StP_PR52_2009" FT /mol_type="genomic DNA" FT /country="Reunion" FT /lat_lon="21.32 S 55.49 E" FT /collection_date="04-Mar-2009" FT /db_xref="taxon:1182518" FT CDS 1..309 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:I1Z768" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:I1Z768" FT /protein_id="AFJ15128.1" FT /translation="MEAPSTLQVYPQPLSLVTQSPPAPTAGDPWFRVVFVLVIALICLG FT IVYLSYRWFIRDVIILLRAKRQRSTEYIGFGNTPARADGGFPIHGRGTDRQGPVPPV" FT CDS 360..1106 FT /codon_start=1 FT /product="capsid protein" FT /db_xref="GOA:I1Z769" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:I1Z769" FT /protein_id="AFJ15129.1" FT /translation="MAGSSRKRTRRGDEVAWNSKRSRLSAQRNPSKRVPRNPRVRPSLQ FT IQTITNGSSSMVPVKQPGYCGLLGTYSRGSDENQRHTSETMTYKIALDLHFSITSAAAA FT YSNSGTGVLWLIYDSQPNGAQPTLKDIFAYEDSLVAWPYTWKVSREVCHRFVVKRRYTF FT TLESNGRRNDEQPPSNSVWPPCKTHLYFHKFAKGLGVRTEWKNDTAGSVGNIKKGALYI FT GIAPGNGVEFNVFGKTRLYFKSIGNQ" FT CDS complement(join(1298..1708,1801..2553)) FT /codon_start=1 FT /product="replication associated protein" FT /db_xref="GOA:I1Z771" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I1Z771" FT /protein_id="AFJ15131.1" FT /translation="MSAFGNHFVPTPSVQAEVPTPLPGSDYPSEEDDLLQHDTPVGPDP FT PRRNFQFKSANAFLTYPRCLLTPFEAGQHLWEVARPWTPSYILASSESHQDGTPHLHVL FT LQTIRPMSTRDPGFFDIQGYHPNIQASRSPNKTREYILKSPITVYSRGTFIPRAGTSGA FT GYGSTPVPKRNEIMRGIIETTTSKAEYLSEVQKAFPFEWATKLQQFEYSAERLFPTLPS FT PFVPPHPPSEPDLTCYETIRSWKDENIFQGDAATRTSRPRSLYIVGPTRTGKTTWARSI FT DPVNHNYWQNGVDFLKYRKSAKYNVLDDIPFKFCPCWKQLVGGQKDYTVNPKYARRMEV FT PGGIPSIILVNYDEDWLKVMTPAQLEYFYDNCVVYQMELHEKFYTPS" FT CDS complement(1609..2553) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:I1Z770" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I1Z770" FT /protein_id="AFJ15130.1" FT /translation="MSAFGNHFVPTPSVQAEVPTPLPGSDYPSEEDDLLQHDTPVGPDP FT PRRNFQFKSANAFLTYPRCLLTPFEAGQHLWEVARPWTPSYILASSESHQDGTPHLHVL FT LQTIRPMSTRDPGFFDIQGYHPNIQASRSPNKTREYILKSPITVYSRGTFIPRAGTSGA FT GYGSTPVPKRNEIMRGIIETTTSKAEYLSEVQKAFPFEWATKLQQFEYSAERLFPTLPS FT PFVPPHPPSEPDLTCYETIRSWKDENIFQVHPYIYMLEHPHCQSVEQAAESLKWMDECT FT RGMLLHAPQDQGASTSLGLHARARLPGPGASTQ" XX SQ Sequence 2882 BP; 702 A; 685 C; 827 G; 668 T; 0 other; atggaggcgc cctcgacgtt gcaggtatac cctcagccct tgagccttgt aacccagtct 60 ccgccggcac ccaccgccgg cgatccgtgg ttccgtgtcg tctttgtgtt ggttattgca 120 ctcatctgct taggtatcgt gtacctgtct tatcggtggt tcatcagaga tgtcatcata 180 ctgcttaggg cgaagagaca gcggagcacg gaatatattg gtttcggcaa tactccagct 240 agggccgacg gtggattccc aatccacgga cgaggaactg ataggcaggg ccctgttcct 300 cctgtctagg gcagggaagc tcttagacga gcttcaggaa gagctctact acgagaccga 360 tggcagggag ttcgcgcaag aggacccgtc ggggggacga ggtggcctgg aactcgaaga 420 gatccaggtt gagcgctcaa cggaacccct cgaagagggt ccccagaaat ccaagggtgc 480 gccccagtct ccagatccag acaattacca acggaagctc aagcatggtt ccggttaagc 540 aaccggggta ctgtggtctc ctcgggactt attcccgagg ctctgatgag aatcagaggc 600 acaccagcga gactatgacg tataaaatag cgttagatct gcatttcagt attacttctg 660 ctgccgctgc ttatagcaat tcaggtactg gggtcttgtg gctgatttac gattcacagc 720 cgaacggagc tcagcctacg ttgaaggaca tcttcgctta cgaggattca ctggtagcgt 780 ggccatacac ctggaaggtc tcaagagagg tctgtcatcg ctttgtggtt aaacggaggt 840 acacgttcac actcgagtca aatggaagaa ggaatgatga gcagccgcca tcaaactcag 900 tttggccgcc ttgtaagact cacctgtact tccacaagtt cgctaagggt ttgggcgtga 960 ggacggagtg gaagaacgat acagccggta gtgttggtaa catcaagaaa ggagcactgt 1020 acataggtat agctccaggt aacggggttg agtttaatgt gtttggcaag acccgtctgt 1080 acttcaagag cattggaaat caataagaaa gtgttattca aataacctgg tactccaggt 1140 tattatgttc gtgtacaaaa cactgagtac atagaggtcg cttgcgacca aagaaaacac 1200 acatgaagaa gggcggacag gacaaagcag gcggcatacg ggcgcgatag gggcaacaca 1260 ctgaaaaaaa atcacacaat agtaatgaaa tcactcccta agagggagtg tagaacttct 1320 catgaagttc catctgatac acaacgcagt tgtcgtagaa gtactccagc tgagctggag 1380 tcatcacctt cagccagtcc tcatcgtagt tgacgagaat gatcgaggga atgcctcccg 1440 gtacttccat cctgcgtgca tacttagggt taacggtgta gtccttctgc cccccgacca 1500 gctgcttcca gcacgggcag aacttgaagg gtatgtcgtc cagaacgttg tacttggcag 1560 acttcctgta cttcaggaag tccaccccgt tctgccagta gttatggttc actgggtcga 1620 tgctccgggc ccaggtagtc ttgcccgtgc gtgtaggccc aacgatgtag aggctccttg 1680 gtcttgaggt gcgtgtagca gcatccccct ggtgcattcg tccatccact tcagggactc 1740 tgcagcttgc tctacagatt gacagtgagg atgttcgagc atgtagatgt atgggtgtac 1800 ctgaaagatg ttctcgtcct tccaggatcg gatggtctcg tagcatgtca ggtcgggctc 1860 tgagggtgga tgaggtggca cgaaaggtga tggtagtgtt gggaagagtc gttctgccga 1920 gtactcgaac tgttgcagtt tagtagccca ctcgaaaggg aaggccttct ggacttcgga 1980 caggtactca gccttgctgg ttgtggtttc gataatgcca cgcattatct cgttacgctt 2040 tggaacaggg gtactcccgt aaccggctcc tgatgtgccg gctctgggaa tgaaagtacc 2100 tctggagtaa acggtgatcg gactcttgag gatgtactct ctagtcttgt taggacttcg 2160 agaagcctgg atgttagggt ggtaaccctg aatgtcaaaa aaaccaggat ccctagtaga 2220 cataggacga atagtctgta gcaaaacatg aagatgtgga gtcccatcct ggtgagactc 2280 agaagaagca agaatgtaac taggagtcca aggacgtgcg acctcccaga gatgctgccc 2340 tgcctcgaac ggggtgagga ggcagcgggg gtaagtgagg aaggcatttg cagacttgaa 2400 ctggaaattt cgtcgtggtg gatctggtcc cacaggggtg tcgtgctgga ggaggtcatc 2460 ctcctcagag gggtagtcag agccaggcag aggtgtggga acctcagcct gaacggaggg 2520 cgtaggcacg aagtggttgc cgaacgcact catgctctgg gacttggtcg caccacgggg 2580 caaggaggct gagaagatac tcagcttctc aactctatcc cttacctgcg tttttgtttc 2640 cgcctcacag cttctcagca agcgtactta tagtacgcca tgttgggcct taagtccagg 2700 cgcggcccaa aaacgcgaaa aataatatta cgagcgtttt aagggcccgc gactgcgacg 2760 gccacatggc cctgtatgtg gacggagcgc actacaggta aagcgggagg gaatcccccg 2820 tgcaataatt tagactttcc gagtcattct ttattaaagg agaggttacc cgtcagaacg 2880 tg 2882 //