ID JQ581051; SV 1; linear; genomic RNA; STD; VRL; 3486 BP. XX AC JQ581051; XX DT 31-MAR-2013 (Rel. 116, Created) DT 31-MAR-2013 (Rel. 116, Last updated, Version 1) XX DE Arracacha virus B strain oca segment RNA2, complete sequence. XX KW . XX OS Arracacha virus B OC Viruses; Riboviria; Picornavirales; Secoviridae; Cheravirus. XX RN [1] RP 1-3486 RX DOI; 10.1007/s00705-012-1546-x. RX PUBMED; 23192172. RA Adams I.P., Glover R., Souza-Richards R., Bennett S., Hany U., Boonham N.; RT "Complete genome sequence of arracacha virus B: a novel cheravirus"; RL Arch. Virol. 158(4):909-913(2013). XX RN [2] RP 1-3486 RA Adams I.P., Glover R., Souza-Richards R., Hany U., Bennett S., Boonham N.; RT ; RL Submitted (31-JAN-2012) to the INSDC. RL Novel Methods, Food and Environment Research Agency, Sand Hutton, York, UK XX DR MD5; 03a1d8f2b5e1992293825e820b4ab78f. XX CC ##Assembly-Data-START## CC Assembly Method :: Newbler v. 2.6 CC Sequencing Technology :: 454 CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3486 FT /organism="Arracacha virus B" FT /segment="RNA2" FT /host="Oxalis tuberosa" FT /strain="oca" FT /mol_type="genomic RNA" FT /country="Peru" FT /collection_date="1981" FT /db_xref="taxon:257463" FT CDS 584..3370 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="UniProtKB/TrEMBL:M4I2M9" FT /protein_id="AFX93742.1" FT /translation="MSEARNHLANVGQDTREIAHSFETPQQMLEFFRKKNGVSKLAQIE FT DQRDIVPSDIYVDSSVSKIIHKFKAPKYTVSTGRKIGAATFVQPESAEAPATIVPMKLI FT SSERKEQLVNEYHHTSAGAKLLAMNVESALPKGTATSATVALVDTAAKNDENFFVVGGI FT VSLGAPYSTLLVAPEWSLPLNENFLKRPAYLVHTADDNYLAGTDLATVSWDAVVESSSN FT ACPFLRKSQKWDKVVSRLAGPAVLHHDVLQTLEREPQKFKPLTCKIQAPPPPSKLLHGP FT AGFRSSSMRVNSLNFINLQIDQPPSNTRVSTSFDPRGKIAGVGEGPEIIRFASKAFDNI FT FSSGSDEAEDAACDTSIETTVSGLYGDTAFIQNPRSFQAIDEAKVVGTPLVTVDFTFNL FT TDITPGKPLWSFNIVDAFLTADNFTQMIMRQLCTARFSLRVDLSISCGRATAFGILLAY FT DEALDTTPLDTSFSKMRGLPGTLALAQEDRVSLVVQPGFYGNTYPLQQDYRRFGRFVLY FT ATTAPNESTNLPSEYHGNATIYIDSIDRVTYGLGEQPCTMVHRQIPAHQLYKAEEITLA FT KRAVLKTFPLDLFGANEYASNYSAILKQCVAYKATLVVDWIMPASFVVTGNYFVFATYG FT DEHLPDAPKFNRLRMLGFPMYDIALVRKGRLVIPMVSWSGAYTRASYPRLHVLLPSGFG FT GQNAEKVNFQIQIKDLLNFQGLGGFCTMPKTPVAGFSLGEANQSLVSSRLTPFYYPWIS FT TNGTGGGDAFYIPITPYNLFGRGWDANGRLKTVVTGSVDNFLHDFACSKLYWRGSLDVE FT ITANYINIDGKVKPWTIGLTPAAIIPIGRQSIGLNVLNMSQMKTGEYVTRFAIPHMSPY FT NWLETMPPEGTGYASRLHFATNGTLVLKFEPGINWFSVSIRPGEDFQFMRHRRTKIN" XX SQ Sequence 3486 BP; 905 A; 771 C; 733 G; 1077 T; 0 other; tgtccaagac agactttaaa aagaggaagt ccgcggtagt aacaccactg gcaaacgtat 60 cggcgcgaaa gcgccgctgt ataggaagcc tgatgaaaag atcctgtttc aggaccttta 120 gaaaagaaaa caaaaacgag tttaatatgg gaaaatatta attcgtctaa caaaaaaaag 180 gaaccccgaa aaaaacactg aaagcactca gttacattcc aaccagcact ctttaaaagc 240 actctgaaaa acgggctaat acctcgtttc ctgttacttt taaaagcact tgttacttgt 300 cattgagttt ctatcatttt acttttccga ttaacttttc acaatagacg aattaatatt 360 ttcccatatt aaactcgttt ttgttttctt ttctaaaggt cctgaaacag gatcttttca 420 tcaggcttcc tatacagcgg cgctttcgcg ccgatacgtt tgccagtggt gttactaccg 480 cggacttcct ctttttaaag tctgtcttgg acattttctg tccctccttt ctcttcttct 540 cacttttctt ttcactcatc tctccttccc tttttttttt gccatgtctg aggcaagaaa 600 tcatctggcc aatgttggcc aggatactcg ggagatagct cactccttcg agactccaca 660 acaaatgttg gagtttttta ggaagaagaa tggggtcagc aaactggccc aaattgagga 720 tcagagggac attgttccct ctgacatcta tgtggattca tctgtctcca agataatcca 780 caaatttaag gcgcctaagt acactgtttc aacagggcgt aaaattgggg ctgccacttt 840 tgtgcagcct gaatcagctg aggcacctgc aacaattgtg cccatgaagt tgatttcttc 900 tgagcggaag gagcaattgg tgaatgaata ccaccatact tctgctggtg ctaagctctt 960 ggcaatgaat gtcgagagtg ctcttcccaa gggaacagcc actagtgcta ctgttgcgct 1020 ggtggacacc gctgctaaaa atgatgaaaa tttttttgtc gttggaggta ttgtttcttt 1080 gggggcacct tattcaacgc tccttgttgc tcctgaatgg tcgctaccat taaatgagaa 1140 tttcttaaag cggccagcct atcttgtgca tacagcagat gataactatc ttgctggaac 1200 tgatcttgct acagtatcct gggatgctgt tgttgaatct tcctctaatg cctgcccctt 1260 cttgcggaaa tctcagaaat gggataaagt tgtaagtagg cttgcaggtc ctgctgtttt 1320 gcatcatgat gtcttgcaaa ctcttgagcg agagccccaa aagtttaaac ctttaacttg 1380 caagatacaa gcccccccgc caccatccaa attgttacat ggtcctgctg gttttcgctc 1440 ttcaagcatg agggttaatt ctctcaactt tatcaacctg cagattgatc agcctcctag 1500 taatacccga gtttcaacat cctttgatcc tcgaggaaaa attgctggag taggagaggg 1560 ccctgagata attcgatttg cttcaaaagc attcgataat atcttttcct caggttctga 1620 tgaagctgaa gatgctgctt gtgacacaag cattgagact acggtctcgg gcttatacgg 1680 tgatacagca tttattcaga accctcgctc ctttcaagct atagatgagg ctaaggttgt 1740 gggtacgcct ctggtgactg tcgacttcac ttttaatttg acagatatta caccaggaaa 1800 acccttgtgg tctttcaata ttgtggatgc ttttctcaca gctgacaatt ttacgcagat 1860 gattatgcgg cagctctgta ctgcccgttt ctctcttcgt gttgatcttt caatcagctg 1920 tggaagagct acagcttttg gcattcttct tgcctatgat gaagcacttg ataccacacc 1980 cttggacaca tctttttcta aaatgcgtgg attgccaggc actctggctt tggcccagga 2040 agatcgggtt tccctcgttg tgcagccggg attttatgga aatacttatc cactccaaca 2100 agactacaga cgttttggta ggtttgtgct atatgcaacc acagctccaa atgaaagcac 2160 aaatcttcca tctgagtatc atggcaatgc cacaatttat attgatagca ttgatcgtgt 2220 tacttatggt cttggggagc aaccgtgtac aatggtacat agacaaattc cggcacatca 2280 attgtacaag gcagaggaaa taacactcgc aaagcgtgct gttctcaaaa catttcctct 2340 tgatcttttt ggtgctaatg aatatgcttc aaactattct gcgatcttga agcaatgtgt 2400 ggcttacaag gcgaccttgg ttgtcgattg gattatgcca gcctcatttg tggtgactgg 2460 caattatttt gtcttcgcca cttatgggga tgaacatctc cctgatgcac caaaatttaa 2520 tagattgcgc atgttgggct ttccaatgta tgatatagca cttgttagaa aaggacgtct 2580 tgtcattccc atggtttcct ggagtggggc ttatacgcgt gctagctacc cacgcttgca 2640 tgttttactg ccttctggtt ttggtggaca aaatgccgaa aaggtcaatt tccagatcca 2700 gatcaaggat ttactcaact tccagggact tggtgggttt tgtaccatgc ccaagactcc 2760 tgtcgcagga ttttccctag gggaagcaaa tcaatcttta gtgagttcaa gactcactcc 2820 tttttattac ccctggatta gcaccaatgg tactggtggt ggcgatgctt tctacatacc 2880 aatcactcct tacaatttat ttggaagagg ttgggatgcc aatggtaggc ttaaaactgt 2940 tgtcacaggc tcagttgata atttcctcca tgattttgca tgttccaaac tttactggag 3000 gggttcacta gatgttgaga tcactgcgaa ctatatcaat attgatggca aagtcaaacc 3060 atggactatt ggtctgacac ccgcagccat tattccaatt gggagacaat caattggatt 3120 gaatgttctc aatatgtccc aaatgaagac aggagagtac gttactcgat ttgctatccc 3180 acacatgtct ccttacaact ggcttgagac catgcctcct gaaggcactg gctatgcttc 3240 aaggctgcat tttgccacca acggcacctt ggttttaaag tttgaacctg gaataaactg 3300 gttctctgtg tctatccgtc ctggtgaaga ttttcagttc atgcgccata ggcgcacaaa 3360 aataaattag ttgtgtggtt ttactttatg ttggttcctt ttaagttaat aaaggattaa 3420 ccaggcatcc tcccctactg ttaaagatgg ggtttagttc tggcaatgtt agaaaatgac 3480 tcaaaa 3486 //