ID   JQ361109; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
XX
AC   JQ361109;
XX
DT   25-APR-2012 (Rel. 112, Created)
DT   25-APR-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Lily mottle virus isolate LMoV-SC HC protein gene, partial cds.
XX
KW   .
XX
OS   Lily mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1374
RA   Wang L., Kong B., Chen H.;
RT   "Detection of Lily mottle virus in Lily by RT-PCR";
RL   Unpublished.
XX
RN   [2]
RP   1-1374
RA   Wang L., Kong B., Chen H.;
RT   ;
RL   Submitted (05-JAN-2012) to the INSDC.
RL   Department of Phytopathology, Yunnan Agricultural University, National
RL   Center for Agricultural Biodiversity, Kunming, Yunnan Province 650201,
RL   China
XX
DR   MD5; f2daa5102fa835f25e8324f285abc041.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1374
FT                   /organism="Lily mottle virus"
FT                   /host="Lilium davidii (lily)"
FT                   /isolate="LMoV-SC"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Sichuan"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:32624"
FT   CDS             <1..>1374
FT                   /codon_start=1
FT                   /product="HC protein"
FT                   /note="HC-Pro"
FT                   /db_xref="GOA:I1V5D6"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:I1V5D6"
FT                   /protein_id="AFI26397.1"
FT                   /translation="SRPGDKFWAGFNSQFLRIKPKGIPHTCTSNFNVFECGQVAALMCQ
FT                   ALYPCGRITCQQCASEYLELTKVELGEKLSDGLYRTSSQIRENHQEFAHVAHILTVIAD
FT                   LLSLKNNNMEAFTEVHKLIGEQTQSPFTHLNRLNSILIKGSDMSSNELYECSDCIRELA
FT                   RFQKNRTDNIKKLDISVFRNKASSKSYFNLDLMCDNQLDKNGNFEWGQRGYHAKRFLSN
FT                   YFEVVNTQNAYREHTLRKHPNGTRELAIGKFIVSTNFEVFRKSMEGKRIPQMPVTEACL
FT                   SQRGERFIYQCCCVTNEDGTPLESTFKMPTKNTLVLGNTGDEKFVDMPTDTDEKMYIAR
FT                   EGYCYINIFFAMLINVRESQAKAFTKMVRDRLVPELGTWPTMIDVATACHTLTVFFPDT
FT                   LSAELPRILVDHNTKTMHVIDSYGSVSTGYHQLKANTVSQLVLFASDTLKSEMKHYQVG
FT                   "
XX
SQ   Sequence 1374 BP; 414 A; 332 C; 328 G; 300 T; 0 other;
     tcgcgcccag gcgataaatt ctgggcagga ttcaactccc aattcctcag gatcaaaccc        60
     aagggaatac cacacacttg cacatcaaac ttcaatgtct tcgaatgtgg gcaggtcgcg       120
     gctcttatgt gccaagcact gtacccatgt gggagaatta catgtcagca gtgtgcgtcc       180
     gagtacctgg agctgacgaa ggttgaactc ggggaaaagc tcagcgatgg tttgtataga       240
     acaagttcgc aaattcgtga aaaccaccaa gagttcgccc atgtggcaca catactcact       300
     gtgatagctg atcttctgag cctcaagaac aacaacatgg aggcgttcac agaagtccac       360
     aaactcatag gtgagcaaac acagtcacca ttcacacacc tcaatcgctt gaactcaata       420
     ctgatcaaag gcagcgatat gagcagcaat gagctgtatg aatgttcaga ctgcattcga       480
     gagctagcgc gattccagaa gaacagaaca gataacatca agaaactgga cattagcgtg       540
     tttcggaata aagcatcctc caagtcatac ttcaacctgg acttaatgtg tgacaaccaa       600
     ctcgacaaga atggaaattt cgaatggggc cagcgaggct atcatgccaa acggttctta       660
     tcgaattatt ttgaggttgt taacacacag aatgcctacc gagagcacac attgaggaag       720
     catccgaatg gcacgcgaga gctcgcaatt gggaaattta tagtgtcaac aaactttgaa       780
     gtgtttcgca agagcatgga agggaagcgc ataccacaaa tgcctgttac tgaggcttgc       840
     ctgagtcagc gtggggagcg tttcatttac cagtgctgct gcgtgacaaa tgaagatggc       900
     actccactcg agtcgacatt caaaatgccg acgaagaaca cactcgtgct tgggaacacg       960
     ggtgacgaga aatttgtcga catgcccacc gacacggatg agaagatgta tatagctcga      1020
     gagggctact gctacatcaa catatttttc gccatgctaa taaacgttcg tgaaagtcaa      1080
     gcaaaggcat ttacgaagat ggtgcgagat cgcctcgtac ccgagcttgg aacatggcca      1140
     accatgatcg atgtggcaac agcatgccac acattgaccg tcttcttccc agacacactg      1200
     agcgcagaac tcccgcgaat tctcgtggac cacaacacta agacgatgca tgtgattgac      1260
     tcgtacggat ctgttagcac tggctaccac cagttaaagg ctaacacagt gagtcagcta      1320
     gttctctttg ctagtgacac gctgaagtca gaaatgaagc actaccaggt cggc            1374
//