ID   JQ354895; SV 1; linear; genomic RNA; STD; VRL; 1092 BP.
XX
AC   JQ354895;
XX
DT   05-SEP-2012 (Rel. 114, Created)
DT   05-SEP-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Alstroemeria virus x triple gene block protein 3 gene, partial cds; and
DE   coat protein gene, complete cds.
XX
KW   .
XX
OS   Alstroemeria virus X
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-1092
RX   PUBMED; 22912734.
RA   Bi Y., Tugume A.K., Valkonen J.P.;
RT   "Small-RNA Deep Sequencing Reveals Arctium tomentosum as a Natural Host of
RT   Alstroemeria virus X and a New Putative Emaravirus";
RL   PLoS One 7(8):E42758-E42758(2012).
XX
RN   [2]
RP   1-1092
RA   Bi Y., Valkonen J.P.T.;
RT   ;
RL   Submitted (04-JAN-2012) to the INSDC.
RL   Agricultural Sciences, University of Helsinki, Latokartanonkaari 7,
RL   Helsinki, Helsinki FIN-00014, Finland
XX
DR   MD5; 9ef0296ad10fc30f156d88b81c6e2458.
DR   EuropePMC; PMC3422356; 22912734.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1092
FT                   /organism="Alstroemeria virus X"
FT                   /host="Arctium tomentosum"
FT                   /isolate="FI:Hel:09"
FT                   /mol_type="genomic RNA"
FT                   /country="Finland"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:316983"
FT   CDS             <1..282
FT                   /codon_start=1
FT                   /product="triple gene block protein 3"
FT                   /db_xref="GOA:J7KE30"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:J7KE30"
FT                   /protein_id="AFQ93463.1"
FT                   /translation="LTSALLTLSPTQINGWPSHQSSPSASSFGFALNFLLVIGGLYLLY
FT                   VLTAPVARIGCVVRVTGESVTIDNCPDTAQIMEKFNLAPWNGVKFPKD"
FT   CDS             314..1006
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:J7K812"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:J7K812"
FT                   /protein_id="AFQ93462.1"
FT                   /translation="MAGDNPNPQATKAPTGSAADLANPNRSPTVADLAQLKYQSTTTSV
FT                   ATPQEIAALGVLFTNAGVDPNSVPLAMWDLARAYADVQSSRSAMLVGSTPSNSAITRQT
FT                   LARKLEQVNITPRQFCMYFAKVVWNILITSNVAPAGWAKLGYPEECKFAAFDFFDGVLS
FT                   PAALEPADGLVRQPNTREIQAHSTAKFGALARQRISNGNYVSTLAEVTHGRVGGVNAMY
FT                   SIEAPPEA"
XX
SQ   Sequence 1092 BP; 265 A; 361 C; 226 G; 240 T; 0 other;
     cttacttccg cccttctgac cctatcaccc actcaaataa atggctggcc ttctcatcag        60
     tcctcaccat cagcctcatc atttggcttt gctctaaatt ttctcctggt gatcggcggc       120
     ctctacctcc tgtatgtact cactgcccca gtcgctagaa ttgggtgcgt ggtccgtgtt       180
     accggagaaa gtgtgacaat agataattgc ccggacacgg cccaaataat ggaaaagttt       240
     aacctcgctc cttggaacgg ggttaagttt ccaaaagatt gaaaatttta ctatacctca       300
     cctccaatta cctatggcag gagataaccc taacccccaa gcaaccaaag cacccaccgg       360
     gtcagcagcc gacctcgcca accccaaccg cagccccacc gtagctgacc tggcccaact       420
     caagtaccaa tcgactacca catcagttgc cacaccccaa gaaatagccg cactcggtgt       480
     actattcacc aacgccggcg tcgaccccaa ctctgtaccc ctcgccatgt gggaccttgc       540
     ccgcgcctac gctgacgtcc agtcaagccg cagtgctatg ctcgtaggtt ccaccccttc       600
     caactcagcc atcactcgcc aaactctagc ccggaaactc gaacaggtca acatcacccc       660
     ccgccagttc tgcatgtact tcgctaaggt agtgtggaat atcctcatca cctccaacgt       720
     agcacctgct ggttgggcta aactagggta ccctgaggag tgcaaattcg ccgctttcga       780
     tttcttcgac ggcgtcctat ccccggcagc actcgaaccc gctgatggcc ttgttcgaca       840
     acccaacacc cgtgagatac aggcacattc caccgccaaa tttggagctc tagctcgcca       900
     acgcatcagc aatggcaact atgtctccac tcttgccgaa gtcacccacg gcagagttgg       960
     tggggtcaat gccatgtact ccatcgaagc ccccccagaa gcctaaggcc tttctccttg      1020
     cccaacttaa atagagatag aactggtgtg gtgtgtgtgg agaagccaga ttaagtcgaa      1080
     agcgatccta gc                                                          1092
//