ID JQ282675; SV 1; linear; genomic DNA; STD; VRL; 1019 BP. XX AC JQ282675; XX DT 01-APR-2012 (Rel. 112, Created) DT 25-JUL-2012 (Rel. 113, Last updated, Version 2) XX DE Fig badnavirus 1 isolate CA41 putative DNA-binding protein gene, complete DE cds; and polyprotein gene, partial cds. XX KW . XX OS Fig badnavirus 1 OC Viruses; Ortervirales; Caulimoviridae; Badnavirus. XX RN [1] RP 1-1019 RX DOI; 10.1094/PHYTO-12-11-0351. RX PUBMED; 22992110. RA Laney A.G., Hassan M., Tzanetakis I.E.; RT "An integrated badnavirus is prevalent in fig germplasm"; RL Phytopathology 102(12):1182-1189(2012). XX RN [2] RP 1-1019 RA Laney A.G., Hassan M., Tzanetakis I.E.; RT ; RL Submitted (13-DEC-2011) to the INSDC. RL Plant Pathology, University of Arkansas, 495 N Campus Dr PTSC 217, RL Fayetteville, AR 72703, USA XX DR MD5; e0b1b6dde387320ce1db9c521e50b94f. XX FH Key Location/Qualifiers FH FT source 1..1019 FT /organism="Fig badnavirus 1" FT /host="Ficus carica Sierra" FT /isolate="CA41" FT /mol_type="genomic DNA" FT /country="USA:California" FT /collection_date="Nov-2011" FT /db_xref="taxon:1034096" FT CDS 25..432 FT /codon_start=1 FT /product="putative DNA-binding protein" FT /note="P2" FT /db_xref="GOA:G8G8W2" FT /db_xref="UniProtKB/TrEMBL:G8G8W2" FT /protein_id="AFF58910.1" FT /translation="MSSYIVSQGTNSYKEAIKATEGIESPAAGFVRPADFQGGTSAARV FT QIKQNNTLIQLLIQIAESLKDIREEQRVLKEEVRQLQKDKAASITEELVERLQSLSLGV FT PEKKVAEKKGTFRVFKDPLRILEEEKEKLPK" FT CDS 429..>1019 FT /codon_start=1 FT /product="polyprotein" FT /note="P3" FT /db_xref="UniProtKB/TrEMBL:H9NHI7" FT /protein_id="AFF58911.1" FT /translation="MNRSRTVTQQLPAVSTRRREEINRDQPLFEDQIRDYRRNQRRRFV FT AEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLYRSRRDNINHQV FT YNHRSEEAMLCVGEQQDRMFIQPNSFQELQRSGMQFIHLGVLQVRLQILHRADEGTMAL FT VVFRDNRWQGDQSIFAISEIDLTRGSQIVYVIPD" XX SQ Sequence 1019 BP; 349 A; 204 C; 267 G; 199 T; 0 other; gaaagttgaa agttggacct cttcatgagt agttatattg tctcccaagg gacaaatagc 60 tacaaggagg ccataaaagc tactgaagga atagaatccc cagcagcagg gttcgtgaga 120 ccagccgact tccagggagg aacatcggca gcgagggttc agattaagca gaataatacc 180 cttattcagc ttctaatcca gatcgctgag tccctgaagg acatccgaga agagcagcga 240 gtcctaaagg aggaggttag gcaactgcag aaggacaaag cagcttcaat cacagaagag 300 cttgtggaaa gacttcaaag tctctcgtta ggagtcccag aaaagaaggt agctgagaag 360 aaaggaactt ttagggtatt caaagaccct ttaagaatcc ttgaagagga aaaagaaaag 420 ctgccaaaat gaacaggtcg agaacggtga ctcagcagct gccagctgtg agtaccagac 480 ggagggaaga aattaacagg gatcaacctc tgttcgagga tcagatccgt gactaccgga 540 ggaatcaaag gcgaaggttt gtagctgaac aagccgtaag acgaaccatg ggaagaatgc 600 gaggacgacg atacaaccaa actctggagc agatcgtaga tccagaggta gagctgaacc 660 aatctatgca ggaaagagcg aacctagtac ctgcagaagt tctgtaccgc tcaagaagag 720 acaacataaa ccatcaggtc tataatcata gatccgagga agcgatgctt tgtgtaggag 780 aacagcaaga caggatgttt atccaaccta acagcttcca agaactacag aggagtggta 840 tgcagttcat acatctggga gttttgcaag taagactcca gatactgcat agggcagatg 900 aaggaacaat ggccttggta gtcttcagag ataaccgatg gcaaggagat cagtcaatct 960 tcgcaatctc agaaattgac ttgactagag gatcgcaaat agtatacgtg atacctgac 1019 //