ID JQ045336; SV 1; linear; genomic RNA; STD; VRL; 3517 BP. XX AC JQ045336; XX DT 26-MAR-2012 (Rel. 112, Created) DT 23-AUG-2013 (Rel. 117, Last updated, Version 2) XX DE Raphanus sativas chrysovirus 1 segment RNA2 putative coat protein gene, DE complete cds. XX KW . XX OS Raphanus sativas chrysovirus 1 OC Viruses; Riboviria; Chrysoviridae; Alphachrysovirus; OC Raphanus sativus chrysovirus. XX RN [1] RP 1-3517 RX DOI; 10.1016/j.virusres.2013.06.004. RX PUBMED; 23850842. RA Li L., Liu J., Xu A., Wang T., Chen J., Zhu X.; RT "Molecular characterization of a trisegmented chrysovirus isolated from the RT radish Raphanus sativus"; RL Virus Res. 176(1-2):169-178(2013). XX RN [2] RP 1-3517 RA Liu J., Li L., Xu A., Wang T., Chen J., Zhu X.; RT "A tripartite radish virus representing a new taxon of Chrysoviridae"; RL Unpublished. XX RN [3] RP 1-3517 RA Liu J., Li L., Xu A., Wang T., Chen J., Zhu X.; RT ; RL Submitted (20-NOV-2011) to the INSDC. RL College of Life Science, Institute of Bioengineering, No. 2 Road, Xiasha, RL Institute of Bioengineering, Zhejiang Sci-Tech University, Hangzhou, RL Zhejiang 310018, P. R. China XX DR MD5; 1c2237ed3996e9decb716c0413d66c54. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3517 FT /organism="Raphanus sativas chrysovirus 1" FT /segment="RNA2" FT /host="Raphanus sativus cv. Duan-ye 13" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="01-Oct-2009" FT /db_xref="taxon:1162393" FT CDS 129..3434 FT /codon_start=1 FT /product="putative coat protein" FT /note="viral capsid protein" FT /db_xref="GOA:H9BPR2" FT /db_xref="UniProtKB/TrEMBL:H9BPR2" FT /protein_id="AFE83591.1" FT /translation="MMSGGIDFDIDHCVNVIRNNSRGFQKAKAEYSSIRELRYTDLTCT FT NRDMGELGAVLKNASVYIDRVVRGGHAGLASPVFIIDYDLRANLLKAAEYAIECVNLSF FT RVEWNVVDVRVELYPGVATNVIVTHELAPMMRDGKARDLTKFASATGLGMKEVRDDNSR FT NMPLLMDVFQSGSVGQNKLTRLVKGCLMYIDRLELGPTTVRHAELSTMKYNVESLIGTL FT DLEDTAFVYTKHDTAPSHNLILYSMCQSYPSPYLGGADHVHIPADGRYIVLVGNNPTRY FT CQDTYVSAELIMGTMIEYAEYFCLGNQIEAAMAIACSLRQNRYFKVVGLPSVLSGCDVI FT APALGRLEAGVTEKTMLSIGAATMLGRFHQMSCLVLIKDVLTSVRNTSRNNYFLYDNIR FT DVLSRDRFTLLEYLEDKTFSGMLKISMDMQWLPYLDDEAMKSFDNISIFEGFWVVNNPL FT TALKDGAIRCLKKGVKKAISLHAPGLFMDSFDTLYNEVVLGGGDENFNIPDGGYTISVS FT NIRCLRRPKPIEDFEFEVDVDLTVPCENSKAPPAPKRFSSKPYSGWEVGSDSEEVRPTR FT RTVPHNALPPIPRAPARARAPPPLQVPFQAPAQESLGHWDDVEDDPNPPVVVRPTLVAT FT GEVMCNMEAMRVALPGVTMPVVGEKETTAGEQEESGDEGTVVAETTDLPPVQILDESPG FT LDKSTDTPFVSCLVTQPVVIAQPSQLPRSGVDVILGQRRFTDGSVVRSDDSGGRRGALR FT PIVPQQSSGARVGRPLTQHITHLGKDEFQVVDAMRVYDFVNDRRSMSIEMMELRDYLLC FT LPQYTYAGEKIWKFRAEGDARNKLMECVEVWNTHKQGRIEDFSESWRSTILELREKNLY FT RVEAYEWPKATDEEVDSYRGKPLLHEALSREDDFQLPAGKTLEDLRGINKFCGAFDWWT FT VEACRICKLNDRVEVLTESSKKWLADYVDKGGHCSAFGEVWRMVKDHALFKSMDWHLVS FT GEMKDIIKHSKKRDLKVNFRNDSKQKSIDYLCRTDSFTADKMSRYISKEKYNDAVYRMM FT EVSLAKMNLLLHQLAVTGKMITRPEYYVIAYRSTRQEANFEYKLKSLLSRYVD" XX SQ Sequence 3517 BP; 973 A; 648 C; 996 G; 900 T; 0 other; gataaaaata tataataatt ggaccctgag gaagggaaac agcattatgc tgtcggtcca 60 agaagatcgc cgcaatcaaa tattcaagca ttttgtttat ttggcgatag aagcaatttc 120 atttaaagat gatgtctggt ggtattgatt ttgacattga ccattgtgtc aatgttatta 180 ggaataattc aagaggcttt caaaaggcca aggccgaata ctcaagtatt cgggaattga 240 ggtacactga tttaacgtgt acaaacagag acatgggtga actcggtgcc gttctgaaga 300 acgcgagtgt atacatcgac cgtgtcgtga gaggggggca tgctggtcta gcctcgcctg 360 tttttataat agactatgat ctcagggcta acctgttgaa ggcggccgag tacgccatag 420 agtgcgtcaa tctatcgttc cgtgtcgaat ggaacgtggt ggatgttagg gtggaattat 480 acccgggagt tgccaccaat gtgattgtca cacatgaact agcacccatg atgagggacg 540 gcaaagccag ggatctgact aagttcgcca gtgctactgg gcttggtatg aaggaggtga 600 gggatgacaa ttccagaaac atgcctctgc tgatggacgt ttttcaaagt gggtctgttg 660 ggcagaataa gttgacaagg ttggtcaagg ggtgtcttat gtacatagat aggctagaac 720 tggggccaac aacagtcagg catgctgagt tgtcgactat gaagtacaac gttgaatcgt 780 tgatcggcac cctagacttg gaggacacag cttttgttta tacgaagcat gataccgcac 840 cctcacacaa cctgattctg tactcaatgt gtcaatcata cccgagtcct tatctgggtg 900 gggctgacca cgtgcatata ccagctgatg gcaggtacat tgtactagtg ggtaacaacc 960 cgacccggta ctgtcaggac acttatgtgt cagctgagct aattatggga accatgattg 1020 agtatgctga atacttttgt cttggtaatc agattgaggc ggctatggct atagcgtgct 1080 cgttgcgcca aaacaggtat tttaaggtcg tcggtctgcc ttccgtgtta agcggatgtg 1140 acgtgatagc gcctgcgtta ggtaggcttg aagcaggagt gactgagaag accatgttgt 1200 caattggggc agcaactatg ttaggtaggt ttcatcagat gtcttgttta gtattaatta 1260 aagatgtctt aactagcgtt aggaatactt ctaggaataa ttactttttg tatgataata 1320 ttagggatgt acttagcagg gataggttta ctttacttga gtacctagag gataagactt 1380 tctcagggat gcttaagata agtatggata tgcagtggtt gccttatttg gatgacgagg 1440 caatgaagag ttttgataac atatccattt ttgaaggttt ttgggtggtt aacaaccctc 1500 taacagccct gaaggatggg gctattagat gcttaaagaa aggggttaag aaggcaataa 1560 gcttacacgc cccaggactt tttatggaca gttttgacac tttgtacaat gaagtagtct 1620 taggaggtgg tgatgagaac ttcaatatac ctgacggtgg ttacacaatt agcgttagca 1680 atattaggtg ccttagacga cccaagccta ttgaagattt tgagtttgag gtggacgtgg 1740 acctaaccgt accatgcgag aactcgaaag ctccaccggc accaaagaga tttagttcaa 1800 aaccctattc cgggtgggaa gtgggctcag actcggagga ggtcaggcct actaggcgga 1860 cggtgcctca taatgcgtta ccccctattc ccagggcgcc agctagggct agggctccac 1920 ccccattgca ggtgcccttc caggcgcctg ctcaggaatc gttgggccac tgggatgacg 1980 tggaggacga tccgaacccc ccagtagttg tgcgacccac gttggtggct actggtgagg 2040 ttatgtgcaa catggaagcc atgcgtgtgg cgctgcctgg ggtgactatg ccagttgtcg 2100 gggagaaaga aacgactgct ggtgagcagg aggagtctgg tgatgagggg acagttgtgg 2160 ctgaaacaac tgacttgccg ccagtccaga ttcttgatga gtctccggga ttggataaat 2220 caacagatac cccgtttgtg agctgcctcg tgactcaacc cgtggttata gcccaaccat 2280 cacagctacc gaggtctggt gtggatgtga tactagggca gaggcggttc actgacggat 2340 ctgtggtacg ctctgatgac agtggcgggc gtagaggggc tctacgccca atagtgccac 2400 aacagagctc aggggcacga gttgggagac cactcacaca gcacataacc cacctgggga 2460 aggatgaatt ccaagtagtg gatgcaatga gggtttatga cttcgttaat gataggaggt 2520 ccatgagcat agagatgatg gagctgcgtg attatctgtt atgcctgccc cagtacactt 2580 atgcaggtga gaagatatgg aagtttaggg ctgaaggaga tgcccggaac aagttgatgg 2640 agtgtgttga ggtgtggaac acacacaaac aaggcaggat tgaagacttc tctgagagct 2700 ggagaagtac gatattggag ctgagggaaa agaacttgta tagagtagag gcatatgagt 2760 ggcccaaggc taccgatgag gaagtggatt cttacagggg aaaaccactt ctccacgagg 2820 ctctatcaag ggaagatgat ttccaactac ccgcaggcaa gacactggag gacttgagag 2880 gaatcaacaa gttttgcggt gcgtttgact ggtggacggt tgaggcttgc cgtatatgca 2940 agttgaatga tagagtagag gtattgacag agagcagcaa gaagtggctg gctgattatg 3000 tggacaaagg aggacattgt tcagcctttg gagaagtatg gaggatggtg aaggaccatg 3060 ctctattcaa gagtatggat tggcacctgg ttagtggtga gatgaaggac ataataaaac 3120 actctaagaa gagagactta aaggtcaact ttagaaatga tagtaaacag aagtccattg 3180 attatctgtg taggactgac agtttcacgg ctgacaagat gtcaagatac atctctaaag 3240 agaaatacaa tgatgctgtg tacagaatga tggaggtgtc gctggcaaag atgaatttgc 3300 tgctgcacca actagcagtg actggaaaga tgataactag gccggagtac tacgttatag 3360 catacaggag tactaggcaa gaagctaatt ttgagtataa attgaaaagt ctacttagta 3420 ggtatgtaga ttagtaggat agttagttag ttaggatagt taggacccgc cccgtaatgc 3480 gttaacttac ggaacactag gttatatata tttgtcg 3517 //