ID   JN676052; SV 1; linear; genomic DNA; STD; VRL; 1222 BP.
XX
AC   JN676052;
XX
DT   21-FEB-2012 (Rel. 111, Created)
DT   21-FEB-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Acalypha yellow mosaic Siliguri virus coat protein (AV1) gene, partial cds;
DE   replication enhancer protein (AC3) and transcription activator protein
DE   (AC2) genes, complete cds; and replication associated protein (AC1) gene,
DE   partial cds.
XX
KW   .
XX
OS   Acalypha yellow mosaic Siliguri virus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1222
RA   Saha A., Saha B., Saha D.;
RT   "Begomoviruses infecting weeds in sub-Himalayan West Bengal";
RL   Unpublished.
XX
RN   [2]
RP   1-1222
RA   Saha B., Saha A., Saha D.;
RT   ;
RL   Submitted (13-SEP-2011) to the INSDC.
RL   Dept. of Botany, University of North Bengal, Rajarammohanpur, Siliguri,
RL   West Bengal 734013, India
XX
DR   MD5; fbda382378a64fda5fb61e02dfbead43.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1222
FT                   /organism="Acalypha yellow mosaic Siliguri virus"
FT                   /segment="DNA-A"
FT                   /host="Acalypha indica L."
FT                   /isolate="SILIGU-1"
FT                   /mol_type="genomic DNA"
FT                   /country="India:West Bengal, Siliguri"
FT                   /collected_by="Bikram Saha"
FT                   /collection_date="Nov-2010"
FT                   /db_xref="taxon:1148153"
FT   gene            <1..390
FT                   /gene="AV1"
FT   CDS             <1..387
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:H6UQ85"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:H6UQ85"
FT                   /protein_id="AFB17984.1"
FT                   /translation="ASNTHSVMFFLVRDRMPVDTPKASGKVLHMFDNEPITATVKNMHR
FT                   DRYQVLKKWSATVTGGQYASKEQALVRRFFRVNNYVIYNRQEAGKYENQTENALMLYMA
FT                   CTHASNPLYATLKIRIYFYDSVSN"
FT   gene            complement(384..788)
FT                   /gene="AC3"
FT   CDS             complement(384..788)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:H6UQ86"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:H6UQ86"
FT                   /protein_id="AFB17985.1"
FT                   /translation="MDSRTGELITAAQATNGVFIWEVPNPLYFKITDHQSLPFRMHLDI
FT                   ITVQIRFNHNLRKALGLHQCWMDFKIWTALHPQTGRFLRVFNYQVLKYLDMVGVISINN
FT                   VVNAVEHVMYNVLTKTAHIEQANIIKFNLY"
FT   gene            complement(529..936)
FT                   /gene="AC2"
FT   CDS             complement(529..936)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transcription activator protein"
FT                   /db_xref="GOA:H6UQ87"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:H6UQ87"
FT                   /protein_id="AFB17986.1"
FT                   /translation="MHPSSPSTTRSTQVPINIQHTPAKSRAFRRTRVDLQCGCSYYLHI
FT                   NCHNHGFTHRGTHHCSSGDEWRVYLGGSKSPLFQDHRPPEPAVPHAPRHNHRPDTVQPQ
FT                   PEESVGTTSVLDGFQNLDSLTPSDWAFLESI"
FT   gene            complement(866..>1222)
FT                   /gene="AC1"
FT   CDS             complement(866..>1222)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:H6UQ88"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:H6UQ88"
FT                   /protein_id="AFB17987.1"
FT                   /translation="SLQDYLCGRLDLTPRVFTNDAWYNFIDDLNPHYLKPFKEFVGAQR
FT                   DWQSHTNYGRTVQITGGIPTIFLCNPGPNSSYKEFLEEPKNTALKAWALKNAPFVTVHH
FT                   PLYSSSNQHSTHAC"
XX
SQ   Sequence 1222 BP; 305 A; 253 C; 309 G; 355 T; 0 other;
     gcatccaata cccatagtgt gatgtttttc ctcgtcaggg atcgtatgcc cgtggatacc        60
     cccaaggctt cggggaaggt gcttcacatg ttcgataatg agcctattac agcaacggtg       120
     aaaaacatgc atcgtgatcg ttaccaagtg ctcaagaagt ggagtgctac ggtgactggt       180
     ggtcagtatg cgagcaagga gcaggctttg gttaggcgtt tttttagggt taataattat       240
     gttatttata atcggcaaga ggctggcaag tatgaaaacc aaacggagaa tgctttgatg       300
     ctctacatgg cgtgtactca cgcctctaac cccttgtatg ctacgcttaa gatacggatc       360
     tatttttatg actctgtatc caattaataa agattaaatt ttattatatt ggcctgctcg       420
     atatgagcag tttttgttaa tacattatac attacatgtt ctacagcatt tacaacgtta       480
     tttattgaaa taacccctac catatccagg tatttaagta cttggtaatt aaatactctc       540
     aagaaacgcc cagtctgagg gtgtaaggct gtccagattt tgaaatccat ccagcactga       600
     tgtagtccca acgctttcct caggttgtgg ttgaaccgta tctggacggt gattatgtct       660
     aggtgcatgc ggaacggcag gctctggtgg tctgtgatct tgaaatagag gggatttgga       720
     acctcccaga taaacacgcc attcgtcgcc tgagctgcag tgatgagttc ccctgtgcgt       780
     gaatccatgg ttgtggcagt tgatatggag atagtacgaa cagccgcatt ggaggtctac       840
     cctcgtgcgc cggaaggccc tacttttagc aggcgtgtgt tgaatgttga ttggaacttg       900
     agtagagcgg gtggtggacg gtgacgaagg gtgcattctt tagtgcccaa gccttcagtg       960
     ccgtattctt cggctcttca aggaactctt tatagctgga attgggccca ggattgcaga      1020
     ggaagatagt gggtatcccc ccagtaattt gaactgtcct tccgtagttg gtgtggcttt      1080
     gccagtctct ctgggccccc acgaactctt taaagggctt tagatagtgc ggatttaagt      1140
     catcaatgaa gttataccag gcatcattgg taaagaccct gggagtcaag tccagacgtc      1200
     cacatagata gtcctgcaga ct                                               1222
//