ID JN381822; SV 1; circular; genomic DNA; STD; VRL; 2627 BP. XX AC JN381822; XX DT 21-MAR-2012 (Rel. 112, Created) DT 05-JUN-2012 (Rel. 113, Last updated, Version 2) XX DE Tomato rugose yellow leaf curl virus isolate U3 clone 2 segment DNA_B, DE complete sequence. XX KW . XX OS Tomato rugose yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2627 RX PUBMED; 22383056. RA Marquez-Martin B., Maeso D., Martinez-Ayala A., Bernal R., RA Teresa Federici M., Vincelli P., Navas-Castillo J., Moriones E.; RT "Diverse population of a new bipartite begomovirus infecting tomato crops RT in Uruguay"; RL Arch. Virol. 157(6):1137-1142(2012). XX RN [2] RP 1-2627 RA Marquez-Martin B., Maeso D., Martinez-Ayala A., Bernal R., Federici M.T., RA Vincelli P., Navas-Castillo J., Moriones E.; RT ; RL Submitted (20-JUL-2011) to the INSDC. RL Virology, Inst. Hortofruticultura Subtropical y Mediterranea 'La Mayora' RL (IHSM-CSIC), Algarrobo Costa s/n., Algarrobo Costa, Malaga 29760, Spain XX DR MD5; 6592417b4f071f11d4b7ed9a52feae20. XX FH Key Location/Qualifiers FH FT source 1..2627 FT /organism="Tomato rugose yellow leaf curl virus" FT /segment="DNA_B" FT /host="tomato" FT /isolate="U3" FT /mol_type="genomic DNA" FT /country="Uruguay:Salto Grande" FT /collection_date="2009" FT /identified_by="B. Marquez-Martin" FT /clone="2" FT /db_xref="taxon:1162280" FT gene 487..1257 FT /gene="BV1" FT CDS 487..1257 FT /codon_start=1 FT /gene="BV1" FT /product="NSP" FT /db_xref="GOA:H8ZPP3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:H8ZPP3" FT /protein_id="AFD62688.1" FT /translation="MYPIRYRRGRSSAQGRGYSRYPLCKRFYSVKRTEWKRRSSKVTHA FT DEDKKMSAQRLHENQFGAGFAMAHNTAMSTYITFPTLGRTEPNRSRSYIKLKRLRYKGT FT VKIERVNADVNMDVPAPKIEGVFSLVVVVDRKPHLNETGSLHSFDEIFGARINSHGNLA FT IAPVFKDRYYIRHVLKRVLSVEKDSLMVDLEGSMSLSNRRFNCWSTFKDLDRDSCNGVY FT ANISKNALLVYYCWMSDNASNASTFVSYDLDYVG" FT gene complement(1360..2241) FT /gene="BC1" FT CDS complement(1360..2241) FT /codon_start=1 FT /gene="BC1" FT /product="MP" FT /db_xref="GOA:H8ZPP4" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:H8ZPP4" FT /protein_id="AFD62689.1" FT /translation="MESQLVHPPHAFNYIESQRDEYQLSHDQTEIKLQFPSTTSQLSAR FT LSRSCMKIDHSVIEYRQQVPINATGTVVVELHDTRITHNESLQASWTFPIRCSIDLHYF FT SSSFFSLKDPIPWKLYYRVCDTNVHQGTHFAKIKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTEKDIDFSHVGYGRWERKLIRSASTTRFGLPGPIEIRPGESWATRSTIGISQSDAE FT SDAGDAVHPYRHLNRLGTTILDPGESASIVGAHRAQSNITMSIAQLNDLVRSTVQGCIN FT TNCTPSQPKSLK" XX SQ Sequence 2627 BP; 682 A; 490 C; 633 G; 822 T; 0 other; actggatggc cgcccgattt tggtgtccta gcatgtggtg gccccacacg ctttggcaga 60 tgagtttacc aaagtgcccc tggtgtcccg tggagtttac caaaatgccc ttggtgtcct 120 caaaatagtt tagcgcattt ttgacgtccg cgaaatgagt gtaatgtacg tttgggttcc 180 gtggactgag tcaactatga attcaaatta aagtggatct atgtttgtct atccaatcat 240 ttcgcgagtg ggaagtctct ttattcttta cgatagtggt tgaggtaaat gtgtcggagg 300 atatctggtc gtcaattcgt actgtactat ttgtgtatgt ggccctattg cccatattac 360 gtggaccaat tgaatatctg gcaatatgtc taattattgg acattagcta atatgaattg 420 tgtatatata ctcaatattg gttgaggtgt atactatgtt taattatatt tactgtattt 480 tgaaacatgt atcctattag atacagacgt ggcaggtcgt cagctcaagg acgaggatat 540 tcccgctatc ccttgtgcaa gcgtttttac tctgtgaaac ggacggagtg gaagcgtcgc 600 tctagtaagg tgactcatgc tgatgaagac aagaagatgt cagcccagcg gctacatgag 660 aatcagttcg gtgctggatt tgctatggct cataatacag cgatgtccac atacatcacc 720 ttcccaactc ttggaagaac cgaacctaac cgttcaaggt catacatcaa gttgaaacgc 780 ttacgttaca agggtactgt gaagattgag cgtgttaatg ctgatgtgaa catggacgtt 840 ccagctccaa aaattgaagg agtcttttct ttggttgtgg tggttgatcg aaagccgcac 900 ttgaatgaaa ctggtagttt gcattcattc gacgaaatat tcggtgcgag gattaatagt 960 catggtaatt tagctatagc tcctgtgttt aaagatcgtt attacatacg tcatgtacta 1020 aaacgagtgc tgtcagtgga gaaggatagc ctgatggtcg atctggaagg aagtatgtct 1080 ttatccaaca ggcgtttcaa ctgctggtct acgtttaagg atttggatag ggattcatgt 1140 aatggggttt atgccaatat aagcaaaaac gccctattag tttattactg ttggatgtcg 1200 gataacgcgt cgaatgcgtc gacatttgta tcatatgatc ttgattatgt gggttgaata 1260 aattgtattg ttgagtgtcc aatttgtata tgctgtttta tgagtaacta aaatttgatt 1320 aataactact tgtgcatact gatatgttaa caactaattt tatttcaacg atttgggttg 1380 tgagggagta cagttagtgt ttatacatcc ttggactgtc gaccggacaa gatcgtttaa 1440 ctgggctatt gacattgtga tgttggactg tgccctatga gcccccacta ttgacgcaga 1500 ctcgcccggg tctaatatgg tggttcctaa cctattgaga tgtctatatg ggtgtaccgc 1560 gtcccctgcg tccgactccg catcagattg gctaatccct atagtgctcc ttgtagccca 1620 agactctccg ggccttattt ctattgggcc tggaagccca aatcttgttg tggatgcgga 1680 tcggatcaat ttcctctccc atctcccata acccacgtga gagaaatcga tgtctttctc 1740 tgtgaactgt ttggacaaaa tcttgaccgt cggtgcccgg aacggaatat caacggaatg 1800 tttagccgtg gacaacttga gtttcccctt gatcttcgcg aagtgagtcc cttgatgtac 1860 gttggtgtcg caaaccctat aatatagttt ccatggaatt gggtctttga gcgagaagaa 1920 tgaggatgag aaataatgga gatctatgct acaccggatc ggaaatgtcc acgacgcttg 1980 taaggattcg ttgtgtgtga tcctcgtgtc atggagctca actaccactg tccctgtggc 2040 gttgattggt acttgttgcc tgtattctat gacgctgtgg tcgatcttca tacagctgcg 2100 actgagtctg gcacttagtt gagacgtcgt tgacggaaac tgcaacttaa tctcagtttg 2160 gtcatgcgat aactgatatt catcgcgttg agattctata taattaaagg catgtggtgg 2220 atgcactaac tgagattcca ttgggaaatc tggccgcgca gcggaaacgt ctgggaaatt 2280 tgtttgacga agatatgatt gacgaaaaga aattgctagg aaactgaatt gaagatgaga 2340 aattgctatg aaacaaaact gaagatggaa aaagttaaat gaattgtgga ttatgtgatg 2400 gcaatggatc tgatgaagta aattgtgtgg tattgttaat aatatgtgtg gcagtcctcc 2460 ttaaatagac tttaaatgtt gttatggagg acaccagcat caaataatgg aggacaccgg 2520 tatggctctc acttctctcc tatttgttgg tgtcctggtg tcccttttaa accctcttga 2580 atcctcttga attctcaagg ggcataagcg gccatccata taatatt 2627 //