ID   JN132444; SV 1; linear; genomic RNA; STD; VRL; 1191 BP.
XX
AC   JN132444;
XX
DT   02-JAN-2012 (Rel. 111, Created)
DT   16-MAR-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Papaya ringspot virus W isolate J6 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus W
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1191
RX   PUBMED; 22160129.
RA   Abdalla O.A., Ali A.;
RT   "Genetic diversity in the 3'-terminal region of papaya ringspot virus
RT   (PRSV-W) isolates from watermelon in Oklahoma";
RL   Arch. Virol. 157(3):405-412(2012).
XX
RN   [2]
RP   1-1191
RA   Mohammad O., Ali A.;
RT   ;
RL   Submitted (17-JUN-2011) to the INSDC.
RL   Biological Science, University of Tulsa, 800 S Tucker Dr, Tulsa, OK 74104,
RL   USA
XX
DR   MD5; 7ab30caf0dc37508bd964911d98305a7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1191
FT                   /organism="Papaya ringspot virus W"
FT                   /host="watermelon"
FT                   /isolate="J6"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Oklahoma"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:12207"
FT   CDS             <1..1173
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:G9FIV0"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:G9FIV0"
FT                   /protein_id="AEW91880.1"
FT                   /translation="AAMIESWGYGELTHQIRRFYQWVLEQAPFNELAKQGRAPYVSEVG
FT                   LRRLYTSERGSMDELEAYIDKYFERERGDSPELLVYHESRSTDDYQLICSNNTHVFHQS
FT                   KNEAVDAGLNEKLKEKEKQKEKEKEKQKEKEKDDASDGNDVSTSTKTGERDRDVNVGTS
FT                   GTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPQQIDISNTRATQSQFEKWYEGVR
FT                   NDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVDYPIKPLIEHATPSFR
FT                   QIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYEVNSKTPDRAREA
FT                   HMQMKAAALRNTSRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGMRN"
FT   mat_peptide     <1..309
FT                   /product="NIb protein"
FT   mat_peptide     310..1170
FT                   /product="coat protein"
XX
SQ   Sequence 1191 BP; 407 A; 204 C; 293 G; 287 T; 0 other;
     gcagcaatga tagagtcatg gggttatggt gagttaacac accagattcg cagattctac        60
     cagtgggttc tcgagcaagc tccgttcaat gagttagcga aacaaggaag ggctccatac       120
     gtatcggaag ttggattgag aagattgtac acaagtgaac gtggatcaat ggatgaattg       180
     gaagcgtata tagataaata ctttgagcgt gagaggggag actcacccga actactggtg       240
     taccatgaat caaggagcac tgatgattat caacttattt gtagcaacaa tacacacgtg       300
     tttcatcagt ccaaaaatga agctgtggat gctggtttga acgaaaagct caaagaaaaa       360
     gaaaaacaga aagaaaaaga aaaagaaaaa caaaaagaga aagaaaaaga cgatgctagt       420
     gacggaaatg atgtgtcaac tagcacaaaa actggagaga gagatagaga tgtcaatgtt       480
     gggaccagtg gaaccttcac tgttccaaga atcaaatcat ttactgacaa gatgattcta       540
     ccaagaatta agggaaagac tgtccttaat ttaaatcatc ttcttcagta taatccgcaa       600
     caaattgata tttctaatac tcgtgccact cagtcacaat ttgagaagtg gtatgagggg       660
     gtgaggaatg attatggcct taatgataat gaaatgcaag taatgctaaa tggcttgatg       720
     gtttggtgta tcgagaatgg tacatctcca gacatatctg gtgtctgggt tatgatggat       780
     ggggaaaccc aagttgatta tccaatcaag cctttaattg agcatgctac cccgtcattt       840
     aggcaaatta tggctcactt tagtaacgcg gcagaagcat atattgcaaa gagaaatgct       900
     actgagaggt acatgccgcg gtatggaatc aagagaaatt tgactgacat tagcctcgca       960
     agatacgctt tcgatttcta tgaggtgaat tcgaaaacac ctgatagggc tcgcgaagct      1020
     cacatgcaga tgaaagctgc agcgctgcga aacactagtc gcagaatgtt tggtatggac      1080
     ggcagtgtta gtaacaagga agaaaacacg gagagacaca cagtggaaga tgtcaataga      1140
     gacatgcact ctctcctggg tatgcgcaac tgaatactcg cgcttgtgtg t               1191
//