ID   JN050880; SV 1; linear; genomic DNA; STD; VRL; 1023 BP.
XX
AC   JN050880;
XX
DT   06-NOV-2011 (Rel. 110, Created)
DT   25-JUL-2012 (Rel. 113, Last updated, Version 3)
XX
DE   Fig badnavirus 1 isolate CA 35 P2 gene, complete cds; and polyprotein gene,
DE   partial cds.
XX
KW   .
XX
OS   Fig badnavirus 1
OC   Viruses; Ortervirales; Caulimoviridae; Badnavirus.
XX
RN   [1]
RP   1-1023
RX   DOI; 10.1094/PHYTO-12-11-0351.
RX   PUBMED; 22992110.
RA   Laney A.G., Hassan M., Tzanetakis I.E.;
RT   "An integrated badnavirus is prevalent in fig germplasm";
RL   Phytopathology 102(12):1182-1189(2012).
XX
RN   [2]
RP   1-1023
RA   Laney A.G., Hassan M., Tzanetakis I.E.;
RT   ;
RL   Submitted (02-JUN-2011) to the INSDC.
RL   Plant Pathology, University of Arkansas, 495 N Campus Dr PTSC 217,
RL   Fayetteville, AR 72703, US
XX
DR   MD5; a7031f9ff6d2627cad4981f22d82b381.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1023
FT                   /organism="Fig badnavirus 1"
FT                   /host="fig cv. Californina Grown"
FT                   /isolate="CA 35"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:California"
FT                   /db_xref="taxon:1034096"
FT   CDS             25..432
FT                   /codon_start=1
FT                   /product="P2"
FT                   /note="putative DNA-binding protein"
FT                   /db_xref="GOA:G8G8W2"
FT                   /db_xref="UniProtKB/TrEMBL:G8G8W2"
FT                   /protein_id="AER45366.1"
FT                   /translation="MSSYIVSQGTNSYKEAIKATEGIESPAAGFVRPADFQGGTSAARV
FT                   QIKQNNTLIQLLIQIAESLKDIREEQRVLKEEVRQLQKDKAASITEELVERLQSLSLGV
FT                   PEKKVAEKKGTFRVFKDPLRILEEEKEKLPK"
FT   CDS             429..>1023
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="P3"
FT                   /db_xref="UniProtKB/TrEMBL:G8FUU9"
FT                   /protein_id="AER45367.1"
FT                   /translation="MNRSRTVTQQLPAVSTRRREEINRDQPLFEDQIRDYRRNQRRRFV
FT                   AEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLYRSRRDNINHQV
FT                   YNHRSEEAMLCVGEQQDRMFIQPNSFQELQRSGMQFIHLGVLQVRLQILHRTDEGTMAL
FT                   VVFRDNRWQGDQSIFAISEVDLTRGSQIVYVIPDT"
XX
SQ   Sequence 1023 BP; 351 A; 205 C; 268 G; 199 T; 0 other;
     gaaagttgaa agttggacct cttcatgagt agttatattg tctcccaagg gacaaatagc        60
     tacaaggagg ccataaaagc tactgaagga atagaatccc cagcagcagg gttcgtgaga       120
     ccagccgact tccagggagg aacatcggca gcgagggttc agattaagca gaataatacc       180
     cttattcagc ttctaatcca gatcgctgag tccctgaagg acatccgaga agagcagcga       240
     gtcctaaagg aggaggttag gcaactgcag aaggacaaag cagcttcaat cacagaagag       300
     cttgtggaaa gacttcaaag tctctcgtta ggagtcccag aaaagaaggt agctgagaag       360
     aaaggaactt ttagggtatt caaagaccct ttaagaatcc ttgaagagga aaaagaaaag       420
     ctgccaaaat gaacaggtcg agaacggtga ctcagcagct gccagctgtg agtaccagac       480
     ggagggaaga aattaacagg gatcaacctc tgttcgagga tcagatccgt gactaccgga       540
     ggaatcaaag gcgaaggttt gtagctgaac aagccgtaag acgaaccatg ggaagaatgc       600
     gaggacgacg atacaaccaa actctggagc agatcgtaga tccagaggta gagctgaacc       660
     aatctatgca ggaaagagcg aacctagtac ctgcagaagt tctgtaccgc tcaagaagag       720
     acaacataaa ccatcaggtc tataatcata gatccgagga agcgatgctt tgtgtaggag       780
     aacagcaaga caggatgttt atccaaccta acagcttcca agaactacag aggagtggta       840
     tgcagttcat acatctggga gttttgcaag taagactcca gatactgcat aggacagatg       900
     aaggaacaat ggccttggta gtcttcagag ataaccgatg gcaaggagat cagtcaatct       960
     tcgcaatctc agaagttgac ttgactagag gatcgcaaat agtatacgtg atacctgaca      1020
     cga                                                                    1023
//