ID   JF957625; SV 1; circular; genomic DNA; STD; VRL; 1109 BP.
XX
AC   JF957625;
XX
DT   25-DEC-2011 (Rel. 111, Created)
DT   18-APR-2012 (Rel. 112, Last updated, Version 2)
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DE   Banana bunchy top virus isolate TO114 segment R, complete sequence.
XX
KW   .
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OS   Banana bunchy top virus
OC   Viruses; Nanoviridae; Babuvirus.
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RN   [1]
RP   1-1109
RX   PUBMED; 22278830.
RA   Stainton D., Kraberger S., Walters M., Wiltshire E.J., Rosario K.,
RA   Halafihi M., Lolohea S., Katoa I., Faitua T.H., Aholelei W., Taufa L.,
RA   Thomas J.E., Collings D.A., Martin D.P., Varsani A.;
RT   "Evidence of inter-component recombination, intra-component recombination
RT   and reassortment in banana bunchy top virus";
RL   J. Gen. Virol. 93(Pt 5):1103-1119(2012).
XX
RN   [2]
RP   1-1109
RA   Varsani A., Stainton D., Kraberger S., Walters M., Wiltshire E.,
RA   Marinov M., Rosario K., Lolohea S., Halafihi M., Katoa I., Faitua T.H.,
RA   Aholelei W., Taufa L., Thomas J.E., Collings D., Martin D.P.;
RT   ;
RL   Submitted (12-MAY-2011) to the INSDC.
RL   School of Biological Sciences, University of Canterbury, Private Bag 4800,
RL   Christchurch 8140, New Zealand
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DR   MD5; 9996c5b2760eb6bf8e8cd0b2802481d0.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1109
FT                   /organism="Banana bunchy top virus"
FT                   /segment="R"
FT                   /host="banana"
FT                   /isolate="TO114"
FT                   /mol_type="genomic DNA"
FT                   /country="Tonga"
FT                   /lat_lon="21.21 S 175.2 W"
FT                   /collection_date="Apr-2010"
FT                   /db_xref="taxon:12585"
FT   CDS             86..946
FT                   /codon_start=1
FT                   /product="rolling-circle replication initiator protein"
FT                   /db_xref="GOA:G9E2K9"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:G9E2K9"
FT                   /protein_id="AEL32443.1"
FT                   /translation="MARYVVCWMFTINNPTTLPVMRDEIKYMVYQVERGQEGTRHVQGY
FT                   VEMKRRSSLKQMRVFFPGAHLEKRKGSQEEARSYCMKEDTRIEGPFEFGAFKLSCNDNL
FT                   FDVIQDMRETHKRPLEYLYDCPNTFDRSKDTLYRVQAEMNKTRAMNSWRTSFSAWTSEV
FT                   ENIMAQPCHRRIIWVYGPNGGEGKTTYAKHLMKTKNAFYSPGGKSLDICRLYNYEDIVI
FT                   FDIPRCKEDYLNYGLLEEFKNGIIQSGKYEPVLKIVEYVEVIVMANFLPKEGIFSEDRI
FT                   KLVSC"
XX
SQ   Sequence 1109 BP; 360 A; 195 C; 273 G; 281 T; 0 other;
     tattaccccc agcgctcggg acgggacatt tgcatctata aatagactcc cccctctcca        60
     cttcaagatc atcatcgacg acagaatggc gcgatatgtg gtatgctgga tgtttaccat       120
     caacaatccc acaacactac cagtgatgag ggatgagatc aaatacatgg tatatcaagt       180
     ggagagggga caggagggta ctcgtcatgt gcaaggatac gtggagatga agagacgaag       240
     ttctctgaag cagatgagag tcttcttccc aggcgcacac cttgagaaac gaaaggggag       300
     ccaagaagaa gcgcggtcat actgtatgaa ggaagataca agaatcgaag gtcccttcga       360
     gtttggtgca tttaaattgt catgtaatga taatttattt gatgtcatac aggatatgcg       420
     tgaaacgcac aaaagacctt tggagtattt atatgattgt cctaatacct tcgatagaag       480
     taaggataca ttatacagag tacaagcaga aatgaataaa acgagggcga tgaatagctg       540
     gagaacgtct ttcagtgctt ggacatcaga ggttgagaat atcatggcgc agccatgtca       600
     tcggagaatt atttgggttt acggcccaaa tggaggagaa ggaaagacaa cgtatgcaaa       660
     acatctaatg aagacgaaga atgcgtttta ttctccagga ggaaaatcat tggatatatg       720
     tagactgtat aattatgagg atattgttat atttgatatc cctagatgca aagaggatta       780
     tttaaattat ggtttattag aggaatttaa gaatggaata attcaaagcg ggaaatatga       840
     acccgttttg aagattgtag aatatgtcga agtcattgta atggctaact tccttccgaa       900
     ggaaggaatc ttttctgaag atcgaataaa gttggtttct tgctgaacac gcaatgactt       960
     tacagcgcac gctccgacaa aagcacacta tgacaaaagt acgggtatct gattggctat      1020
     cctaacgatc tagggccgta ggcccgtgag caatgaacgg cgagatcata tgtcccgagt      1080
     taatgcgcca cgtaagcgct ggggactat                                        1109
//