ID JF920136; SV 1; linear; genomic RNA; STD; VRL; 6416 BP. XX AC JF920136; XX DT 31-MAY-2013 (Rel. 116, Created) DT 31-MAY-2013 (Rel. 116, Last updated, Version 1) XX DE Saint Floris virus strain Dak ANB 512 polymerase gene, complete cds. XX KW . XX OS Saint-Floris virus OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; OC Phlebovirus florisense. XX RN [1] RP 1-6416 RA Palacios G., Savji N., Shah A., Lipkin W.I.; RT "Genomic and phylogenetic characterization of Naples serogroup RT phleboviruses"; RL Unpublished. XX RN [2] RP 1-6416 RA Palacios G., Savji N., Shah A., Lipkin W.I.; RT ; RL Submitted (05-MAY-2011) to the INSDC. RL Center for Infection and Immunity, Columbia University, 772 W 168th Street, RL 17th Floor, New York, NY 10032, USA XX DR MD5; 6268928bfb759067f592ce462aab6ff1. XX FH Key Location/Qualifiers FH FT source 1..6416 FT /organism="Saint-Floris virus" FT /segment="L" FT /host="Tatera sp." FT /strain="Dak ANB 512" FT /mol_type="genomic RNA" FT /country="Central African Republic" FT /collection_date="1971" FT /note="serogroup: Naples" FT /db_xref="taxon:2847279" FT CDS 19..6318 FT /codon_start=1 FT /product="polymerase" FT /db_xref="GOA:R4I440" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR022531" FT /db_xref="InterPro:IPR029124" FT /db_xref="UniProtKB/TrEMBL:R4I440" FT /protein_id="AFH88999.1" FT /translation="MDKILRQQLPTDSSLTIRPLENKESTLYDCPLPAFIVTQALTRVE FT IEIATSEISENASGSTIKPFVTVPIQDLTLFRHNFTFGHLASTTDKKFSEVFGVVESDD FT SNFQSPDMIIETEAGHVFVIEFTTTLGDFGSALAAARIKIAKYEIACRNRSALKPISLF FT VIAAYDKGVVTNMELDDNEVNEIVFRFRLARSIHNDLRLINPNLFDADEEMSRLEREVN FT SLMSSIQIDWETTSRKFPSFREDLFVKFQQSPSDSQYLGRIIKQCIDDAAKGIERDNYY FT DKDWTNEQRYKENGYRASNSVMSKVSEMLASDFLRGLNDHKSTVQIPAWCTLKGREGKD FT LSPLKSLVVQGSHPMAKIWDKVCRNAILEKIERMYDDPVEELRYAMSGSRIGDSKEKLK FT ERNKYHRTTVDLGSEEKEYAAALGVCGKKNSHLHASKEARIRSKKGFSIDHDISKVEQY FT LADFSEQDWTPNPHLYNPLSEDFILRLEAMGIHQPELVHVDEETPETLKCHKDFSETPY FT GSWLQMVSIIGAELSASVKQHVKPSQYIVKRLLGSSVYLLIKPTLSKSHIFVSFAVEKQ FT ALCHELNMSSVFKPSIDAGDLLVTDFVSFKLCKITNLCKAFAVLEAAMCFWVETHGLEP FT WLFLNQLDSYRLRDAVYMFKLSLLTMMEDKATTEELQTMQRYVIMEGFVSLPEFPNPAK FT MLSKIPKVLRSELQVFLVRRLFDTIVKISHKPFTIMKSKNIIRWKNLFNPFSGQMITEL FT QTLISCCYNGYFKNKEEDTEPSALSGMYKKIIELEHLRPKTDKYLGYEDPEKPEMHEFS FT RSYLKFMCEHAINRLSKQYGKNILKQIENSIIRELSSLTLERLSTLKATSNFNNSWYDY FT KSVKDKNYTRDKLLVKMTEFAAKGKTLAIELFDECMRRIEQKGCMEICLFKKQQHGGLR FT EIYVMGADERIVQSVIEAIARAIGRYFDSDTLCNPSNKTKIPETHGLRAKKKCGQSVWT FT CATSDDARKWNQGHYVTKFALMLCEFTPKEWWPLIIRGCSMFTNKYMMMNLDYLRIIDN FT HKELNIQDEFVQDLFRAYHGEITVPWMDKEKTYLKTTTGMMQGILHFTSSLLHSLHQEV FT VRSTSMQLFINKMGPDAASRVVCDVMQGSDDSSMLISFPNISEKVKMRYKMTAAICFRI FT KKSLGVFAGIYPSEKSTSNTDFVMEYNSEFFFHSQHVRPTIRWIAASCSLPEVETLVAR FT QEEAANLLTSITEGGGSFSLAAMVQQCQCSIHYMLMGLGVSSLFKEFKSAIYRWKDPGL FT GFFLFDNPYSAGLSGFKYNLYRAIIGTDLRYIYSYFLKKIKDSQSDDDGVISESCSVSP FT GGAIVMSSTLRWGSIEKFKRLRARLNIPEDWRERINEVPEILYRAPHSGEETVLRIAEK FT VHSPGVVSSLSTGNAVCKVMAASVYFLSACIFEDAGNQEYNVTGTDKYSLLQKLLAFEH FT ASMSDKISHEDMLFLFPNLQEYEAFDAIIYNKGKFNIVPRASQREATQTSIVVFEYHSS FT SRVAPEKLVSDKWFGTRKSKIGTPGFRAEWDRLRAVVRWLRDTPEETLEASPFTNHIQI FT RNFFARMEGKPRVIKVTGAPVKKRSGLSKIAMAIRDNFCKTGFVRGMEDEVGYSRAVLV FT EKLKHYVFSIMMGPYTEEAKLRFLTQVLTDEPQIIMNQADRKSKANTLGLLQMFLKGEA FT GVAQKIENLKEGIFGAFTRVQRFSKSSINHKYYGKGTWRGVMDGYQVQIDIDGKEGSPS FT YLSGITVAYCTRPWVLSSCIRAWCDDMNIFNNIDVSTKVKNNDAHFWLFDFKMYGHSYP FT YGCPIYTVERNITDTAIIMDNEIDIKIRGSTVNLYVKSRENRPRDLHILSYTPVESDVS FT SIIRLTSDPYFQPGGIFAVEPTRSWMLCQPLKWEFAQPVLNIVSKARTAPIQLDVTRLS FT EIIRLCTESALRNQVGTIYSLSRSDNLDSSEAVDMSDMFDMMLEDEEGFTGFDDLASHL FT TVQEDPDYMEEVEFDEEDIQLFGPAHYKEIQKLTVLAHPLMDHFMTRVVNSVGRMQVRR FT LLEKNLITQDKRKLAELLFIALGKDPSVIKVELIHGDSPVDIPDELLG" XX SQ Sequence 6416 BP; 2068 A; 1180 C; 1433 G; 1735 T; 0 other; acacaaagag gcccaataat ggataaaatc ttacgacaac aactcccgac tgacagcagc 60 ttaacgatca gacctttgga gaataaagag agcactctgt atgattgtcc tttacctgct 120 tttatagtga ctcaggcttt gacaagggtt gagattgaga tagcaacttc tgagatatca 180 gaaaatgctt ctggatctac aattaagccc tttgtcactg tcccgatcca agacctaaca 240 ctatttagac acaacttcac attcggccat ctagctagca caacagacaa gaagttttca 300 gaggtcttcg gggttgtaga gtctgatgac tcaaattttc agtcacctga tatgattata 360 gaaacagaag ctgggcacgt gtttgtaata gaatttacta caactttggg agattttggt 420 tctgctttag cagcagctag gattaaaata gcaaagtatg aaattgcatg cagaaacaga 480 tcagccttga agcccatatc cctgtttgta attgcagctt atgacaaggg ggttgtaaca 540 aatatggagt tagatgacaa cgaggtgaat gagatcgttt tccgatttcg tctagcaagg 600 agtatacata atgatctgag attgatcaac cccaacttgt ttgatgcaga tgaagaaatg 660 agcagacttg aaagagaagt caacagccta atgtcatcaa tccaaattga ctgggaaacc 720 acaagtcgaa agtttccttc tttccgagag gacttatttg tcaagttcca acagtcacct 780 tcagactcac aatatcttgg cagaatcata aaacagtgta ttgatgatgc tgctaaaggg 840 atagagagag acaattatta tgataaagat tggacgaatg agcagaggta caaagagaat 900 ggctaccgag cttctaactc agtgatgtca aaagtctcag aaatgctggc ttcagatttc 960 cttagaggac taaatgatca taagtcaaca gtacagatcc ctgcatggtg caccttaaaa 1020 ggaagagaag gaaaagattt gagtccttta aaatccttag ttgttcaagg ttcacatcca 1080 atggctaaaa tttgggataa agtgtgtaga aatgccattc tagagaagat tgagcgtatg 1140 tatgatgatc cagtggagga acttaggtat gccatgagtg ggtcaagaat tggcgatagt 1200 aaggaaaaac tcaaagaaag aaacaaatac cataggacaa cagttgactt gggaagcgag 1260 gagaaggagt atgctgctgc tcttggggtt tgtgggaaaa agaattcaca ccttcatgct 1320 tcaaaagaag caagaataag aagtaagaag ggcttctcaa ttgatcatga tatatcaaaa 1380 gtggagcaat acctagctga tttctcagag caagactgga cccctaatcc tcacttgtat 1440 aaccctttga gcgaagattt tatcttgaga cttgaggcca tgggcataca tcagccagag 1500 ttggttcatg ttgatgaaga gacaccagag acattgaagt gtcataaaga cttctcagaa 1560 accccatacg gctcatggct tcagatggtc tccataattg gagcagaact gtcagcatct 1620 gtcaaacagc atgtcaaacc aagccagtat atagttaaaa gattacttgg atcatccgta 1680 tacctactca ttaagccgac actctccaaa agccacattt ttgtttcttt tgcagtggaa 1740 aaacaagccc tttgccatga actaaacatg tcaagtgttt ttaagccatc aattgatgct 1800 ggggacttat tagtgacaga ctttgtgtcg ttcaagttat gtaagataac taatctttgc 1860 aaagcatttg cagtactaga agcagccatg tgcttttggg tggagacaca tggtctagaa 1920 ccatggcttt ttctgaatca attggactca tatagactga gagatgcagt ttacatgttc 1980 aaattatcat tgttgacaat gatggaagac aaggcgacca cagaagagct acagacaatg 2040 caaagatatg ttataatgga aggctttgtt tcccttccag aattccctaa tcctgcaaag 2100 atgttgtcca aaattcctaa agttttaaga tctgagcttc aggtctttct tgtgagaaga 2160 ttgtttgaca caattgtcaa gatctcacat aagcctttta caatcatgaa gtccaaaaat 2220 attatacgat ggaaaaacct tttcaacccc ttctcaggcc agatgattac ggaactacag 2280 actctcataa gttgctgcta caatggctat ttcaagaata aagaagaaga cacagagcca 2340 tcagcattgt cagggatgta caaaaagatc atagagcttg aacatctgag gccaaagact 2400 gacaagtacc tggggtatga ggatccagag aaacctgaaa tgcatgaatt cagccgtagt 2460 taccttaaat tcatgtgtga gcatgcaatt aatagactgt caaagcagta tgggaagaac 2520 atcttaaaac aaatagagaa tagcataatt agagaactat cttctctaac tctagagaga 2580 ttgtcaacct tgaaggcaac aagtaatttt aataactcct ggtatgacta taagtctgtc 2640 aaagacaaaa attatactag agataagttg ttggtcaaaa tgacagaatt tgcagcaaaa 2700 ggcaaaacac ttgccattga attgtttgat gaatgtatga ggaggattga gcagaaagga 2760 tgtatggaga tttgtttgtt taagaaacaa cagcacggtg gactgcgaga gatctatgtg 2820 atgggagctg atgagagaat agtgcagtca gtgattgagg ctattgctcg tgctataggg 2880 agatactttg attctgatac tctatgcaat ccctcaaata aaaccaaaat cccagagact 2940 catggactgc gagcaaaaaa gaaatgtggg caatctgtct ggacatgtgc cacttctgat 3000 gatgctcgta aatggaatca ggggcattat gttaccaagt ttgcattaat gctctgtgaa 3060 tttactccaa aagaatggtg gccactaata ataagaggct gctctatgtt cacaaacaaa 3120 tacatgatga tgaacctgga ttatctaagg ataatagaca atcataaaga attgaacatc 3180 caagatgagt ttgttcaaga tctcttcaga gcatatcatg gggagatcac agtaccctgg 3240 atggataaag agaaaacata tttgaaaaca actacaggca tgatgcaagg tatcctacac 3300 ttcacatcct cacttttaca ctcactacat caggaagttg tcagatcaac ttctatgcag 3360 ctcttcatca acaaaatggg tcctgatgct gcttccagag tggtctgtga tgttatgcag 3420 ggctctgatg atagcagtat gctaataagc ttcccaaaca tatctgagaa ggtcaagatg 3480 aggtacaaaa tgactgcagc aatatgtttc aggattaaga aaagtttagg ggtttttgca 3540 ggaatatacc catcagaaaa gtccacatcc aatactgatt tcgtaatgga gtacaattct 3600 gaattcttct tccactctca gcatgttcga ccaacaataa gatggattgc tgcttcatgc 3660 tctctgccag aagtagagac tcttgtggcc agacaggagg aagcagctaa tctgctgact 3720 tccatcactg aaggaggtgg gtcattctca ttagctgcta tggtccagca atgtcagtgt 3780 tccatccatt atatgctcat gggcctagga gtgagctcac tttttaaaga attcaaatct 3840 gccatctatc gatggaaaga tcctggtttg ggatttttcc tctttgacaa cccatattca 3900 gctgggcttt ctggattcaa atataattta tacagagcaa taatagggac tgaccttagg 3960 tatatatatt catacttcct gaagaagatt aaggattcac aatctgatga tgatggagtt 4020 attagtgaat catgcagtgt gagcccgggt ggagcaattg tgatgagctc aactctcagg 4080 tggggttcca ttgagaaatt caaacgcctt agagctcgtt taaatatacc tgaagactgg 4140 agagagagga taaatgaagt ccctgaaatt ttgtataggg cccctcactc aggagaagag 4200 acagttctga ggatagcaga aaaagttcac agcccaggtg tcgtatcatc actcagcact 4260 ggaaatgcag tgtgcaaggt tatggctgca tcagtgtact ttctgtcagc atgcattttt 4320 gaagatgctg gtaatcagga gtacaatgta acaggtacgg ataagtacag cctcttgcag 4380 aaactgctgg cattcgaaca tgcttctatg tctgacaaga ttagtcatga ggacatgctc 4440 ttcttattcc cgaacttaca agagtatgag gcctttgatg ccattattta taacaaggga 4500 aagttcaata tagtccctag ggctagtcaa agagaagcca ctcagacaag tattgttgtt 4560 tttgaatacc actcttcttc tagggtggct cctgagaaac tggtcagtga caaatggttt 4620 ggtacacgga agagtaagat aggaacccca gggtttagag cagagtggga tagacttaga 4680 gcagttgtcc gctggcttag ggacacacca gaagagactc tagaggcatc tccatttacc 4740 aaccacattc agatcaggaa tttcttcgcc aggatggagg gtaaaccgag agtcataaaa 4800 gtaactggtg caccagtaaa gaagaggtca ggtttaagta agatagccat ggcaataaga 4860 gacaacttct gcaagactgg ttttgtgaga ggcatggagg atgaagttgg atacagcaga 4920 gcagtcctgg ttgagaagct aaagcactat gtgttctcaa tcatgatggg cccatacact 4980 gaagaagcta aattaaggtt cctgactcaa gtcttaacag atgaaccaca gattattatg 5040 aaccaggctg acaggaagtc taaagccaat acacttggcc tactgcagat gttcttgaaa 5100 ggagaagctg gagtggctca aaagattgag aatcttaagg aggggatctt tggggcattc 5160 acacgagttc aaagattcag caaaagctcg ataaaccata agtattatgg taagggaacg 5220 tggagagggg tgatggatgg ttaccaagtg caaattgaca ttgatgggaa agagggatct 5280 ccttcttacc tctccggtat aactgtggcc tactgcacac gaccatgggt gttgtcatct 5340 tgcattcggg cctggtgtga tgatatgaac atcttcaaca acatagatgt cagcacaaaa 5400 gtcaagaaca atgatgccca cttctggtta tttgacttta agatgtatgg acactcatac 5460 ccatatggtt gcccaatata tactgtggaa aggaacatca ccgacacagc tataattatg 5520 gacaatgaaa tagacataaa aattcgaggg agtacagtaa atctctatgt taaaagtaga 5580 gagaacaggc caagagatct tcacatcctg tcttacacac cagttgaatc tgatgttagc 5640 tctataatca gattaacttc ggacccatac tttcaaccgg gagggatttt tgctgtagag 5700 cctaccaggt cttggatgct ctgccagcca ctcaaatggg aatttgctca acctgtctta 5760 aatattgttt ccaaagctag aacagctcct atccagcttg atgtaaccag acttagtgaa 5820 attattagat tatgcacaga gtcagctcta agaaatcaag ttggtactat ctactctctt 5880 agcaggtcag acaatcttga ttcatcagaa gctgtcgata tgagcgacat gtttgatatg 5940 atgctagagg atgaagaagg atttactgga tttgatgatc ttgcaagcca tcttactgtc 6000 caagaagatc cagattacat ggaggaagtt gagtttgacg aagaagacat acaattgttt 6060 ggacctgctc attataaaga gatacaaaag ctgactgtct tagctcatcc tcttatggat 6120 cactttatga caagagtggt caattctgtg ggaagaatgc aggtacgtcg actccttgag 6180 aaaaatctaa taactcaaga caaaaggaag cttgcagaac tactgttcat agccttggga 6240 aaggacccat cggtcataaa agtagagtta attcatggtg acagtccagt tgacattcct 6300 gacgaacttc ttgggtagaa agcttcatca atatggcagt tgtaaataag ataggtggga 6360 ttgatagggg ttattttgtt tacttttaga tattaacatt tgggcggtct ttgtgt 6416 //