ID JF728865; SV 1; circular; genomic DNA; STD; VRL; 2760 BP. XX AC JF728865; XX DT 27-JUL-2011 (Rel. 109, Created) DT 16-DEC-2013 (Rel. 119, Last updated, Version 3) XX DE Ageratum enation virus clone Age 9, complete genome. XX KW . XX OS Ageratum enation virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2760 RX PUBMED; 24512752. RA Kumar J., Gunapati S., Singh S.P., Gadre R., Sharma N.C., Tuli R.; RT "Molecular characterization and pathogenicity of a carrot (Daucus carota) RT infecting begomovirus and associated betasatellite from India"; RL Virus Res. 178(2):478-485(2013). XX RN [2] RP 1-2760 RA Kumar J., Tuli R.; RT "Ageratum enation virus causing yellowing and leaf curling"; RL Unpublished. XX RN [3] RP 1-2760 RA Kumar J., Tuli R.; RT ; RL Submitted (25-MAR-2011) to the INSDC. RL Agri-Biotechnology, National Agri-Food Biotechnology Institute, India, RL C-127, Phase-8, Mohali, Punjab 160071, India XX DR MD5; eb1dc73ea4a16f6a9a23c7fe11e62d35. DR EuropePMC; PMC4353908; 25674770. XX FH Key Location/Qualifiers FH FT source 1..2760 FT /organism="Ageratum enation virus" FT /host="Daucus carota" FT /isolate="Mohali" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="25-Jul-2010" FT /clone="Age 9" FT /db_xref="taxon:188333" FT gene 145..492 FT /gene="AV2" FT CDS 145..492 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:B7ZDP7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B7ZDP7" FT /protein_id="AEK78889.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL FT ISVIRARNYVEATSRYNHFHARFEGTPTSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKS" FT gene 305..1075 FT /gene="AV1" FT CDS 305..1075 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="encapsidation" FT /db_xref="GOA:B7ZDP9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B7ZDP9" FT /protein_id="AEK78890.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKARAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPRDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRLWHATVTGGQYECKEQALVKKFVRVDNYVVYNQQEAGKYEDH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1072..1476) FT /gene="REn" FT CDS complement(1072..1476) FT /codon_start=1 FT /gene="REn" FT /product="replication enhancer protein" FT /db_xref="GOA:G1C2N3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G1C2N3" FT /protein_id="AEK78891.1" FT /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKITDHQNRPFLMKEDI FT ITVQIQFNYNLRKALGIHKCFLVYRIWMTSQPQTGRFLRVFKTQVLKYLNNLGVISINN FT VIRSVDHVLWDVLEHIVYVEQSYSIKFNIY" FT gene complement(1217..1621) FT /gene="TrAP" FT CDS complement(1217..1621) FT /codon_start=1 FT /gene="TrAP" FT /product="transcription activator protein" FT /db_xref="GOA:G1C2P6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:G1C2P6" FT /protein_id="AEK78892.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA FT CHNHGFTHRGTHHCSSSREWRVYLGDSKSPVFQDNRSPEPAISHERGHHHRTNTVQLQP FT EESVGDTQVFSSLPNLDDFTASDWSFFKGL" FT gene complement(1524..2609) FT /gene="AC1" FT CDS complement(1524..2609) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /note="initiation of rolling circle" FT /db_xref="GOA:G1C2N5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G1C2N5" FT /protein_id="AEK78893.1" FT /translation="MAPPKRFQIYAKNFFLTYPHCSLTKEEALSQIQNLQTPVNKKYIK FT ICRELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQRAKSSTDVKSYI FT DKDGDTLEWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAAMAIIREKLPEKFIFQYH FT NLNSNLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMVAAARPLRPQSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALRNWALKNAIFVTLEGPL FT YSGSNQSAAQASQEGDEASTC" FT gene complement(2195..2452) FT /gene="AC4" FT CDS complement(2195..2452) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:G1C2N6" FT /protein_id="AEK78894.1" FT /translation="MGNLIFTCLSSSKGNISARINDSSTWYPQTGQHISIRTFRELNPA FT PTSSPTSTRTETPSNGENSRSMGDLHEEVNRQLMMLLQKP" XX SQ Sequence 2760 BP; 753 A; 530 C; 616 G; 861 T; 0 other; accggatggc cgcgattttt taaagtggtc cccccagtgc actaactgac aaagacatgt 60 ccaccaatgt aaatcgtcgc tcaaagctta attgttttgt ggtcccttat ttaaacttgc 120 tcatcaagta gtgcactccg cactatgtgg gatccattag tgaacgagtt tcccgaaacc 180 gttcacggtt ttaggtgtat gttagcagtt aaatatctgc agttagtaga gaagacttat 240 tcgcctgaca cattagggca cgatttaatt agggatttaa tttcagttat tagggctaga 300 aattatgtcg aagcgaccag cagatataat catttccacg cccgcttcga aggtacgccg 360 acgtctcaac ttcgacagcc catatgtgag ccgtgctgct gcccccattg tccgcgtcac 420 caaagcaaga gcatgggcga acaggcccat gaacagaaag cccaggatgt acaggatgta 480 cagaagtcct gatgtcccta gaggatgtga aggtccatgt aaggttcagt cttttgagtc 540 tagacatgac attcagcata ttggtaaggt tatgtgtgtc agtgatgtta cgcgtggaac 600 tgggctgact catcgagtgg gtaaaaggtt ttgtgttaaa tccgtttatg tcttgggtaa 660 gatctggatg gatgaaaata ttaagaccaa gaaccacact aatagtgtta tgtttttttt 720 agttagggat cgtaggcctg tggataaacc tcgagatttt ggtgaggttt ttaacatgtt 780 tgataatgag cccagtacgg ctactgtgaa gaatgttcat cgtgataggt atcaagtgct 840 tcgtttatgg catgcaactg ttacgggtgg acaatatgag tgtaaggaac aagctcttgt 900 gaagaagttt gttagggttg ataattatgt tgtgtataac cagcaagaag ctggcaagta 960 tgaagatcat tctgagaatg cgttaatgtt gtatatggca tgtacgcatg cctctaaccc 1020 agtgtatgct actttgaaga tacggatcta tttctatgat tccgtaacaa attaataaat 1080 attaaatttt attgaatatg attgttctac atatacaatg tgttctaata catcccataa 1140 aacatgatca actgatctga ttacattatt aatactgata actcctaaat tatttaaata 1200 ttttaaaact tgagtcttaa agacccttaa aaaacgacca gtctgaggct gtgaagtcat 1260 ccagattcgg tagactagaa aacacttgtg tatccccaac gctttcctca ggttgtaatt 1320 gaactgtatt tgtacggtga tgatgtcctc tttcatgaga aatggccggt tctggtgatc 1380 tgttatcttg aaatacaggg gattttgaat ctcccagata aacacgccat tctctgcttg 1440 agctgcagtg atgagttccc ctgtgcgtga atccatggtt gtggcaggct aatgctatga 1500 agtatgaaca cccacaaggg agatcaacac gtcgacgcct cgtccccttc ttggctagcc 1560 tgtgctgcac tttgattgga acctgagtag agtgggcctt cgagggtgac gaagatcgca 1620 ttctttaaag cccaatttct gagtgcatta tttttctctt catccaagaa ctctttataa 1680 cttgaattag gtcctggatt gcagaggaag atagtgggaa ttccgccttt aatttgaact 1740 ggctttccgt atttggtatt tgattgccag tccctttggg cccccatgaa ttctttaaag 1800 tgctttaggt agtggggatc tacgtcatcg atgacgttat accacgcatc attgctgtaa 1860 actttggggc ttagatctaa atgaccgcat aggtaattat gaggccctaa tgacctagcc 1920 cacatcgttt tacccgtacg actgtctccc tcaattacta tactttgagg cctcagaggc 1980 cgcgcagcgg caaccatgac attttctgag acccattctt caagttcttc aggaacttga 2040 tcaaaagaag aagataaaaa aggcgaaaca taaacctcca acggaggagt aaaaatccta 2100 tctaaattag aatttaaatt atgatattga aaaataaatt tttctgggag tttctccctt 2160 attatagcca ttgcagcttc tttagagcct gcatttaggg cttctgcagc agcatcatta 2220 gctgtctgtt gacctcctcg tgcagatctc ccatcgacct ggaattctcc ccattcgagg 2280 gtgtctccgt ccttgtcgat gtaggacttg acgtcggtgc tggatttagc tctctgaatg 2340 ttcggatgga aatgtgctga cctgtttggg gataccaggt cgaagaatcg ttgattcttg 2400 cactgatatt tcccttcgaa ctggataagc acgtgaagat gaggttcccc attttcgtga 2460 agctctctgc agattttgat atattttttg tttactgggg tttgtaagtt ttggatttgg 2520 gaaagtgctt cttctttagt aagagagcag tgtggataag tgagaaagaa atttttggca 2580 tatatttgaa atcgttttgg aggagccatt gacttggtca atcggtactc agctctagtc 2640 ttatgtcaat tggtgatcag tactcaatat atagtgagta cctaatggca ttattcgtaa 2700 ttttgaaaag aaattcaaaa ttcaaatttg aaatccaaaa gcggccatcc gtataatatt 2760 //