ID JF728862; SV 1; circular; genomic DNA; STD; VRL; 2748 BP. XX AC JF728862; XX DT 27-JUL-2011 (Rel. 109, Created) DT 16-DEC-2013 (Rel. 119, Last updated, Version 3) XX DE Ageratum enation virus clone Age 4, complete genome. XX KW . XX OS Ageratum enation virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2748 RX PUBMED; 24512752. RA Kumar J., Gunapati S., Singh S.P., Gadre R., Sharma N.C., Tuli R.; RT "Molecular characterization and pathogenicity of a carrot (Daucus carota) RT infecting begomovirus and associated betasatellite from India"; RL Virus Res. 178(2):478-485(2013). XX RN [2] RP 1-2748 RA Kumar J., Tuli R.; RT "Ageratum enation virus causing yellowing and leaf curling"; RL Unpublished. XX RN [3] RP 1-2748 RA Kumar J., Tuli R.; RT ; RL Submitted (25-MAR-2011) to the INSDC. RL Agri-Biotechnology, National Agri-Food Biotechnology Institute, India, RL C-127, Phase-8, Mohali, Punjab 160071, India XX DR MD5; 8b3b51228d98f56496b282ab0423a34e. XX FH Key Location/Qualifiers FH FT source 1..2748 FT /organism="Ageratum enation virus" FT /host="Ageratum conyzoides" FT /isolate="Mohali" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="25-Jul-2010" FT /clone="Age 4" FT /db_xref="taxon:188333" FT gene 133..480 FT /gene="AV2" FT CDS 133..480 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:G1C2N7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:G1C2N7" FT /protein_id="AEK78871.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL FT ISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGQQAHEQ FT KAQDVQDVQKS" FT gene 293..1063 FT /gene="AV1" FT CDS 293..1063 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="encapsidation" FT /db_xref="GOA:D1GV12" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D1GV12" FT /protein_id="AEK78872.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKARAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1060..1464) FT /gene="REn" FT CDS complement(1060..1464) FT /codon_start=1 FT /gene="REn" FT /product="replication enhancer protein" FT /db_xref="GOA:G1C2K9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G1C2K9" FT /protein_id="AEK78873.1" FT /translation="MDSRTGELITAAQAENGVYIWEIQNPLYFKITEHQNRPFLMKEDI FT MTVQIQFNYNLRKALGVHKCFLIYRIWMTSQPQTGRFLRVFKTQVLKYLNNLGVISINN FT VIRSVDHVLWDVLEHIVYVEQSYSIKFNIY" FT gene complement(1205..1609) FT /gene="TrAP" FT CDS complement(1205..1609) FT /codon_start=1 FT /gene="TrAP" FT /product="transcription activator protein" FT /db_xref="GOA:G1C2K4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:G1C2K4" FT /protein_id="AEK78874.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRLAKKGIRRRRVDLPCGCTYFIALA FT CHNHGFTHRGTHHCSSSREWRVYLGDSKSPLFQDNRAPEPSISHERRHHDRPNTIQLQP FT EESSGSAQMFSNLPNLDDFTASDWSFLKGL" FT gene complement(1512..2597) FT /gene="AC1" FT CDS complement(1512..2597) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /note="initiation of rolling circle" FT /db_xref="GOA:G1C2L7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G1C2L7" FT /protein_id="AEK78875.1" FT /translation="MAPPKRFQIYAKNFFLTYPHCSLTKEEALSQIQDLQTPVNKKYIK FT ICRELHENGEPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSTDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAAMAIIREKLPEKFIFQYH FT NLNSNLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMVAAARPLRPQSIVIEGD FT SRTGKTLWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALRNWALKNAIFVTLEGPL FT YSGSNQSAAQASQEGDQASTC" FT gene complement(2183..2440) FT /gene="AC4" FT CDS complement(2183..2440) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E1V2J2" FT /protein_id="AEK78876.1" FT /translation="MGNLIFTCLSSSKENTNAKITDSSTWYPQPDQHISIRTFRELNPA FT PTSSPTSTRTETPSNGENSRSMEDLHEEVNRQLMMLLQKP" XX SQ Sequence 2748 BP; 753 A; 521 C; 615 G; 859 T; 0 other; accggatggc cgcgattttt ttaaagtggg cccctgacaa agacatgtcc accaatctaa 60 atcgtcgctc aaagcttaat tgttttgtgg tcccttattt atacttgctc agcaagtagt 120 gcactccgta ctatgtggga tccattagtt aacgagtttc ccgaaaccgt tcacggtttt 180 aggtgtatgt tagcagttaa atatctgcag ttagtagaga agacttattc gcctgacaca 240 ttagggcacg atttaattag ggatttaatt tcagttatta gggctagaaa ttatgtcgaa 300 gcgaccagca gatataatca tttccacgcc cgcttcgaag gtacgccgcc gtctcaactt 360 cgacagccca tatgtgagcc gtgctgctgc ccccattgtc cgcgtcacca aagcaagagc 420 atgggccaac aggcccatga acagaaagcc caggatgtac aggatgtaca gaagtcctga 480 tgtccctaga ggatgtgaag gtccatgtaa ggtccagtct tttgagtcta gacatgacat 540 tcagcatata ggtaaggtta tgtgtgtcag tgatgttacg cgtggaactg ggctgactca 600 tcgagtgggt aaaaggtttt gtgttaaatc cgtttatgtc ttgggtaaga tctggatgga 660 tgaaaatatt aagacgaaga accacactaa cagtgttatg ttttttttag ttagagatcg 720 taggcctgtg gataaacctc aagattttgg agaggttttt aacatgtttg ataatgagcc 780 cagtacggct actgtgaaga atgttcatcg tgataggtat caagtgcttc ggaaatggca 840 tgcaactgtt acgggtggac aatatgcgtc aaaggaacag gctcttgtga agaagtttgt 900 tagggttaat aattatgttg tgtataacca gcaagaagct ggcaagtatg aaaatcattc 960 tgagaatgcg ttaatgttgt atatggcatg tactcatgcc tctaacccag tgtatgctac 1020 tttgaagata cggatctatt tctatgattc cgtaacaaat taataaatat taaattttat 1080 tgaatatgat tgttctacat atacaatgtg ttctaataca tcccataaaa catgatcaac 1140 tgatctgatt acattattaa tactgataac tcctaaatta tttaaatatt ttaaaacttg 1200 agtcttaaag acccttaaga aacgaccagt ctgaggctgt gaagtcatcc agattcggta 1260 gattagaaaa catttgtgca ctcccagagc tttcctcagg ttgtagttga attgtatttg 1320 gacggtcatg atgtcttctt tcatgagaaa tggacggttc tggtgctctg ttatcttgaa 1380 ataaagggga ttttgaatct cccagatata cacgccattc tctgcttgag ctgcagtgat 1440 gagttcccct gtgcgtgaat ccatggttgt ggcaggctaa tgctatgaag tatgtacacc 1500 cacaagggag atcaacacgt cgacgcctga tccccttctt ggctagcctg tgctgcactt 1560 tgattggaac ctgagtagag tgggccttcg agggtgacga agatcgcatt ctttaaagcc 1620 caatttctga gtgcattatt cttctcttca tccaagaact ctttataact tgaattaggt 1680 cctggattgc agaggaagat agtgggaatt ccgcctttaa tttgaactgg ctttccgtat 1740 ttggtatttg attgccagtc cctttgggcc cccatgaatt ctttaaagtg ctttaggtag 1800 tggggatcta cgtcatcgat gacgttatac cacgcatcat tactgtaaac tttggggctt 1860 agatctaaat gaccgcatag gtaattatga ggccctaatg acctagccca caacgtttta 1920 cccgtacgac tgtcaccttc aattactata ctttgaggcc tcagaggccg cgcagcggca 1980 accatgacat tttctgagac ccattcttca agttcttcag gaacttgatc aaaagaagaa 2040 gataaaaaag gcgaaacata aacctccaac ggaggagtaa aaatcctatc taaattagaa 2100 tttaaattat gatattgaaa aataaatttt tctgggagtt tctcccttat tatagccatt 2160 gcagcttctt tagagcctgc atttagggct tctgcagcag catcattagc tgtctgttga 2220 cctcctcgtg cagatcttcc atcgatctgg aattctcccc attcgagggt gtctccgtcc 2280 ttgtcgatgt aggacttgac gtcggtgctg gatttagctc cctgaatgtt cggatggaaa 2340 tgtgctgatc tggttgggga taccaggtcg aagaatctgt tattttggca tttgtatttt 2400 ccttcgaact ggataagcac gtgaagatga ggttccccat tttcgtgaag ctctctgcag 2460 attttgatat attttttgtt tactggggtt tgtaggtctt ggatttggga aagtgcttct 2520 tctttagtaa gagagcagtg tggataagtg agaaagaaat ttttggcata tatttgaaat 2580 cgttttggag gagccattga cttggtcaat cggtactcag ctctagtctt atgtcaattg 2640 gtgatcagta ctcaatatat agtgagtacc gaatggcatt attcgtaatt ttgaaaagaa 2700 attcaaaatt caaatttgaa atccaaaagc ggccatccgt ataatatt 2748 //