ID J02057; SV 1; circular; genomic DNA; STD; VRL; 2779 BP. XX AC J02057; XX DT 13-JUN-1985 (Rel. 06, Created) DT 15-MAY-2014 (Rel. 120, Last updated, Version 4) XX DE African cassava mosaic virus isolate West Kenyan 844 segment DNA1, complete DE sequence. XX KW complete genome; unidentified reading frame. XX OS African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2779 RA Stanley J., Gay M.R.; RT "Nucleotide sequence of cassava latent virus DNA"; RL Nature 301:260-262(1983). XX DR MD5; 065f0944480ca19310cefd4bd43a4f54. DR EuropePMC; PMC1079959; 15784145. DR EuropePMC; PMC110531; 9811744. DR EuropePMC; PMC2224568; 17977971. DR EuropePMC; PMC2902183; 17532021. DR EuropePMC; PMC353736; 14990696. DR GOA; P03561. DR GOA; P14975. DR GOA; P14976. DR GOA; P14977. DR GOA; P14982. DR InterPro; IPR000263; GV_A/BR1_coat. DR InterPro; IPR000650; Gem_coat_AR1. DR InterPro; IPR000657; Gemini_AL3. DR InterPro; IPR000942; Gemini_AL2. DR InterPro; IPR001191; Gemini_AL1_REP. DR InterPro; IPR001301; Gemini_AL1_CLV. DR InterPro; IPR002488; Gemini_C4. DR InterPro; IPR002511; Gemini_V2. DR InterPro; IPR005159; WCCH. DR InterPro; IPR022690; Gemini_AL1_REP_cat-dom. DR InterPro; IPR022692; Gemini_AL1_REP_central. DR PDB; 6EK5; EM. DR UniProtKB/Swiss-Prot; P03561; CAPSD_CLVK. DR UniProtKB/Swiss-Prot; P0C6G1; AC4_CLVK. DR UniProtKB/Swiss-Prot; P14975; AV2_CLVK. DR UniProtKB/Swiss-Prot; P14976; TRAP_CLVK. DR UniProtKB/Swiss-Prot; P14977; REN_CLVK. DR UniProtKB/Swiss-Prot; P14982; REP_CLVK. XX CC The genome of CLV consists of two pieces of circular ss-DNA. [1] CC notes the presence of several open reading frames. XX FH Key Location/Qualifiers FH FT source 1..2779 FT /organism="African cassava mosaic virus" FT /segment="DNA1" FT /host="cassava" FT /isolate="West Kenyan 844" FT /mol_type="genomic DNA" FT /db_xref="taxon:10817" FT variation 92 FT /note="t may be a" FT variation 155 FT /note="c may be t" FT variation 242 FT /note="g may be t" FT variation 260 FT /note="g may be a" FT variation 487 FT /note="a may be c" FT variation 559 FT /note="c may be a" FT variation 1905 FT /note="c may be t" FT variation 1923 FT /note="c may be t" FT variation 1934 FT /note="c may be a" FT variation 1962 FT /note="g may be a" FT variation 2091 FT /note="g may be a" FT variation 2647 FT /note="t may be g" XX SQ Sequence 2779 BP; 749 A; 556 C; 683 G; 791 T; 0 other; ctcaactaga gacactcttg agcatctcct cctattaatt ggagacatta tataggtgtc 60 tctaaatggc attcttgtaa taagttgaac tttaatttga attaaaaggc tcaaaaggct 120 cagaacaccc aaggggccaa ccgtataata ttaccggttg gccccgcccc ctttaatgtg 180 gtccccgcgc actacttatg tcggccaatc atgatgtagc tttaaaggtt atgtattagt 240 ggtgggccac tatatacttg caggcgaagt tgtggctagt gcgcaatgtg ggatccactg 300 gtgaatgagt ttccagactc ggtgcatggg cttaggtgta tgctggcaat taaatatttg 360 caggccttag aggatacata cgagcccagt acgttgggcc acgaactggt gagggatcta 420 gtctcagtta tcagggctcg taattatgtc gaagcgacca ggagatatca tcatttccac 480 tccaggatcc aaggttcgtc gaagactgaa cttcgacagc ccatacagga accgtgctac 540 tgcccccact gtccacgtca caaatcgaaa acgggcctgg gtgaacaggc ccatgtacag 600 aaagcccacg atgtacagga tgtatagaag cccagacata cctaggggct gtgaaggccc 660 atgtaaggtc cagtcgtttg agcagaggga tgatgtgaag caccttggta tctgtaaggt 720 gattagtgat gtgacgcgtg ggcctgggct gacacacagg gtcggaaaga ggttttgtat 780 caagtccatt tacattcttg gtaagatctg gctggatgaa actattaaga agcaaaatca 840 cactaataat gtgatttttt acctgcttag ggatagaagg ccgtatggca atgcgcccca 900 agacttcggg cagatattta acatgtttga taatgagccc agtactgcaa caattaagaa 960 cgatttgagg gataggtttc aggtgttgag gaaatttcat gccactgttg ttggtggtcc 1020 atatggcatg aaggagcagg cgttggtgaa aaggttttac aggttgaatc atcacgtgac 1080 atacaatcat caggaggcag ggaagtatga gaatcacaca gagaatgctt tgcttctgta 1140 catggcatgt actcatgcct ccaatcctgt atatgcgacg ttgaaaatac gtatatactt 1200 ctatgacagt attggcaatt aataaacatt gaattttatt tcatgagtca acttgcactc 1260 aatagtgttg gcaattacat tgaacaaaac atgatcagca gctctaatta cattgttaat 1320 tgagataaca cctatattat ccaagtattt aattacttgg tatctaaaga cccttaagaa 1380 aagaccagtc tgaggctgta aggttgtcca gatctggaag ttgagaaaac atttgtgaat 1440 ccccagctcc ttcctcaggt tgtgattgaa tcgaacctgg actgttatga tgtcctggtt 1500 cagcaggaat ggtcgttgtt ggtgcctggt gattgtgaaa tacaggggat tgtttatttc 1560 ccaggtatac acgccattca ttgcttgagg agcagtgatg acttcccctg tgcgtaaatc 1620 catgattgaa gcagttgata tggaggtaat atgaacatcc acagacaaga tccactctcc 1680 tacgccggat ggctcgcttc ttgacttgtc tgtgagtgac tttgattgga acctgagtag 1740 agtggttctg tgagggtgat gaagattgca ttctttaatg cccaggcctt tagcgcttct 1800 tgcttttcct cggctaggaa ctctttatag gacgaggtag gtcctggatt gcagaggaag 1860 atagtgggaa ttccaccttt aatttgaacg ggtttcccgt atttcgtgtt ggactgccag 1920 tccctctggg accccatgaa ttccttaaag tgctttaggt agtggggatc gacgtcatca 1980 atgacgttgt accaggcagc attattgaag acctttggac taaggtccag gtgtccacac 2040 aggtaattat gtgggcctaa agatctggcc catatcgtct tccctgttct gctatcacct 2100 tctatgacaa tactattagg tctccatggc cgcgcagcgg aatccctaac attatcagcg 2160 acccattctt caatttcaac aggaacttgg tcaaaggaag aacatgggaa gggagaaaca 2220 taaggagctg gtggctcttg gaaaatccta tctaaattac tatttagatt atgaaactga 2280 agtacaaagt cctttgggac taattcccta atgacattaa gagcttctga cttactgccg 2340 ctgttaagcg ctttggcgta agcatcattc gctgattgtt gaccgcctct agcagatcgt 2400 ccatcgattt gaaattgtcc ccattcgacg gtgtcgccgt ccttatccag ataggacttg 2460 acatccgagc ttgatttggc accttgaatg ttggggtgga aactggtgct acagcttggg 2520 tgtacacaat cgaagagacg attgttcgta atcgtgattt taccctcgaa ttgaatgagg 2580 gcatgcaagt gaggttcccc attctgatgc agctctctac agattttaat gaacttaggg 2640 tttgattgga gagaaagtgt ttgaatgaat gacagtaggt gttctttggg tatagaacac 2700 tttgggtatg tgagaaagac attcttggct tgaattcgaa aacgaggagt tctcatgttg 2760 accaagtcaa ttggagaca 2779 //