ID J02042; SV 1; linear; genomic RNA; STD; VRL; 2111 BP. XX AC J02042; J02043; V00099; XX DT 02-JUN-1994 (Rel. 39, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Brome mosaic virus 3a and coat protein genes, complete cds. XX KW . XX OS Brome mosaic virus OC Viruses; Riboviria; Bromoviridae; Bromovirus. XX RN [1] RP 1961-2111 RX DOI; 10.1073/pnas.74.11.4900. RX PUBMED; 270723. RA Dasgupta R., Kaesberg P.; RT "Sequence of an oligonucleotide derived from the 3' end of each of the four RT brome mosaic viral RNAs"; RL Proc. Natl. Acad. Sci. U.S.A. 74(11):4900-4904(1977). XX RN [2] RP 1775-2111 RX PUBMED; 18631666. RA Dasgupta R., Ahlquist P.G., Kaesberg P.; RT "Sequence of the 3' untranslated region of brome mosaic virus coat protein RT messenger RNA"; RL Virology 104(2):339-346(1980). XX RN [3] RP 1825-2111 RX DOI; 10.1016/0092-8674(81)90283-X. RX PUBMED; 7214524. RA Ahlquist P., Dasgupta R., Kaesberg P.; RT "Near identity of 3- RNA secondary structure in bromoviruses and cucumber RT mosaic virus"; RL Cell 23(1):183-189(1981). XX RN [4] RP 1-2111 RX DOI; 10.1016/0022-2836(81)90524-6. RX PUBMED; 7338913. RA Ahlquist P., Luckow V., Kaesberg P.; RT "Complete nucleotide sequence of brome mosaic virus RNA3"; RL J. Mol. Biol. 153(1):23-38(1981). XX RN [5] RP 1236-2111 RX DOI; 10.1093/nar/10.2.703. RX PUBMED; 6895941. RA Dasgupta R., Kaesberg P.; RT "Complete nucleotide sequences of the coat protein messenger RNAs of brome RT mosaic virus and cowpea chlorotic mottle virus"; RL Nucleic Acids Res. 10(2):703-713(1982). XX DR MD5; 1359963fd9d920e5edeb147b2ef05148. DR EuropePMC; PMC4093861; 24672042. DR RFAM; RF01084; TLS-PK3. DR RFAM; RF01108; BMV3_UPD-PK1. DR RFAM; RF01113; BMV3_UPD-PK3. XX CC On Apr 23, 2004 this sequence version replaced gi:58732. XX FH Key Location/Qualifiers FH FT source 1..2111 FT /organism="Brome mosaic virus" FT /segment="RNA 3" FT /strain="Russian" FT /mol_type="genomic RNA" FT /db_xref="taxon:12302" FT modified_base 1 FT /mod_base=OTHER FT /note="m7Gppp cap" FT CDS 92..1003 FT /codon_start=1 FT /product="3a" FT /db_xref="GOA:P03603" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/Swiss-Prot:P03603" FT /protein_id="AAA46333.1" FT /translation="MSNIVSPFSGSSRTTSDVGKQAGGTSDEKLIESLFSEKAVKEIAA FT ECKLGCYNYLKSNEPRNYIDLVPKSHVSAWLSWATSKYDKGELPSRGFMNVPRIVCFLV FT RTTDSAESGSITVSLCDSGKAARAGVLEAIDNQEATIQLSALPALIALTPSYDCPMEVI FT GGDSGRNRCFGIATQLSGVVGTTGSVAVTHAYWQANFKAKPNNYKLHGPATIMVMPFDR FT LRQLDKKSLKNYIRGISNQSVDHGYLLGRPLQSVDQVAQEDLLVEESESPSALGRGVKD FT SKSVSASSVAGLPVSSPTLRIK" FT CDS 1245..1814 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:P03602" FT /db_xref="InterPro:IPR002009" FT /db_xref="PDB:1JS9" FT /db_xref="PDB:1YC6" FT /db_xref="PDB:3J7L" FT /db_xref="PDB:3J7M" FT /db_xref="PDB:3J7N" FT /db_xref="UniProtKB/Swiss-Prot:P03602" FT /protein_id="AAA46334.1" FT /translation="MSTSGTGKMTRAQRRAAARRNRWTARVQPVIVEPLAAGQGKAIKA FT IAGYSISKWEASSDAITAKATNAMSITLPHELSSEKNKELKVGRVLLWLGLLPSVAGRI FT KACVAEKQAQAEAAFQVALAVADSSKEVVAAMYTDAFRGATLGDLLNLQIYLYASEAVP FT AKAVVVHLEVEHVRPTFDDFFTPVYR" XX SQ Sequence 2111 BP; 522 A; 467 C; 544 G; 578 T; 0 other; gtaaaatacc aactaattct cgttcgattc cggcgaacat tctattttac caacatcggt 60 tttttcagta gtgatactgt ttttgttccc gatgtctaac atagtttctc ccttcagtgg 120 ttcctcacga actacgtctg acgttggcaa gcaagcggga ggtactagcg atgagaagct 180 cattgagtcg ctgttctctg aaaaggctgt gaaagagata gctgccgagt gtaaactcgg 240 atgttataac tatctgaagt ctaatgaacc ccgcaactat atagacctgg tgccaaagtc 300 acacgtatct gcttggctct catgggctac atccaagtat gataaaggag agttaccttc 360 caggggattc atgaacgttc cacgcatcgt ttgttttctc gttcgtacca cagatagcgc 420 agagtccggt tctataaccg tgagcctgtg cgattctggt aaggctgctc gtgctggagt 480 actcgaagcc attgataatc aggaggccac aattcagttg tcggctttac ctgctttgat 540 agctttgacg cctagctatg attgtccgat ggaagtcatc ggcggtgata gcggtaggaa 600 tcgatgtttt gggatagcaa cccaacttag cggtgtggtg gggacaacag gttccgttgc 660 agttactcat gcgtattggc aagctaattt caaagcgaag cccaacaact ataagttgca 720 tggtcccgct acaattatgg taatgccatt tgacagactg agacaactcg ataagaaaag 780 cctcaaaaat tatattagag gtatttctaa ccagtctgtg gatcatgggt atcttctcgg 840 aagaccgtta caatctgttg atcaggttgc ccaggaagat ttgttagttg aggaatccga 900 gtctccttcc gctctcggca gaggtgtgaa ggatagtaag tctgtatccg cgtcatctgt 960 cgctggactt cctgtgtcca gtcctacgct tagaattaaa taggtaaatc cggtctaaca 1020 agctcggtcc atttcgtaga gttaagcaag ctggggagac ccccgacagc cgtttggatc 1080 agcgctcgcg tctcgtttgg gttcaattcc cttaccttac aacggcgtgt tgagataggt 1140 cctcggggga ggttatccat gtttgtggat attctatgtt gtgtgtctga gttattatta 1200 aaaaaaaaaa aaaaagatct atgtcctaat tcagcgtatt aataatgtcg acttcaggaa 1260 ctggtaagat gactcgcgcg cagcgtcgtg ctgccgctcg cagaaatcgt tggaccgcta 1320 gggtccaacc agtaattgtc gaaccactcg ctgctggcca aggcaaggcc attaaagcga 1380 ttgcaggata cagcatatca aagtgggagg cgtcttcgga cgcgattaca gcgaaagcca 1440 ccaatgccat gagtatcact ctgccccatg agctctcttc tgaaaagaat aaggagctta 1500 aggtcggcag ggtgctgctt tggttgggac ttcttcctag cgttgctggg aggattaagg 1560 cttgtgttgc tgagaaacag gcacaggccg aggctgcttt tcaagtagcc ttggcggttg 1620 cagactcctc gaaagaggtg gtcgcggcca tgtatacgga cgcctttcga ggggcgactc 1680 tgggggattt gcttaatctc cagatttatc tgtatgcatc tgaagcagtg cctgctaagg 1740 cggtcgttgt acatctagaa gttgagcacg taaggcctac gttcgatgac ttcttcaccc 1800 cggtttatag gtagtgcccc tgctcggaga gcccctgact gggttaaagt cacaggcccc 1860 ttgtctcagg tagagaccct gtccaggtag gacactttgg ctaaggttaa aagcttgttg 1920 aatcagtaca ataactgata gtcgtggttg acacgcagac ctcttacaag agtgtctagg 1980 tgcctttgag agttactctt tgctctcttc ggaagaaccc ttaggggttc gtgcatgggc 2040 ttgcatagca agtcttagaa tgcgggtacc gtacagtgtt gaaaaacact gtaaatctct 2100 aaaagagacc a 2111 //