ID   HQ593618; SV 1; linear; mRNA; STD; VRL; 648 BP.
XX
AC   HQ593618;
XX
DT   20-FEB-2011 (Rel. 107, Created)
DT   21-AUG-2012 (Rel. 113, Last updated, Version 4)
XX
DE   Tobacco mosaic virus isolate TMV-Larestan coat protein (CP) mRNA, complete
DE   cds.
XX
KW   .
XX
OS   Tobacco mosaic virus
OC   Viruses; Riboviria; Virgaviridae; Tobamovirus.
XX
RN   [1]
RP   1-648
RA   Alishiri A., Rakhshandehroo F.;
RT   ;
RL   Submitted (02-NOV-2010) to the INSDC.
RL   Plant Pathology, College of Agriculture and Natural Resources, Science and
RL   Research Branch, Islamic Azad University, Pounak Square- Simun Bulivar
RL   Street-Hesarak Avenue, Tehran 14515-775, Iran
XX
DR   MD5; c8cdef57b9e7f89ea4204b4ffa5a8642.
DR   EuropePMC; PMC4174800; 25288953.
DR   RFAM; RF01114; TMV_UPD-PK1.
DR   RFAM; RF01115; TMV_UPD-PK2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..648
FT                   /organism="Tobacco mosaic virus"
FT                   /host="pumpkin"
FT                   /isolate="TMV-Larestan"
FT                   /mol_type="mRNA"
FT                   /country="Iran"
FT                   /collected_by="A. Alishiri"
FT                   /collection_date="15-Sep-2009"
FT                   /identified_by="A. Alishiri"
FT                   /PCR_primers="fwd_name: TMV spec, fwd_seq:
FT                   cggtcagtgccgaacaagaa, rev_name: Tob-Uni 1, rev_seq:
FT                   atttaagtggasggaaaavcact"
FT                   /note="acronym: TMV"
FT                   /db_xref="taxon:12242"
FT   gene            1..648
FT                   /gene="CP"
FT   CDS             79..558
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:F1CWF9"
FT                   /db_xref="InterPro:IPR001337"
FT                   /db_xref="InterPro:IPR036417"
FT                   /db_xref="UniProtKB/TrEMBL:F1CWF9"
FT                   /protein_id="ADX62308.1"
FT                   /translation="MSYGITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVV
FT                   QRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPT
FT                   TAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT"
XX
SQ   Sequence 648 BP; 195 A; 122 C; 145 G; 185 T; 1 other;
     ggaggatgag ttttaaaaga ataatttaat cgatgaggat tcggagactt ctgtcgccga        60
     aacggattcg ttttaaatat gtcttacgga attactactc catctcagtt cgtgttcttg       120
     tcatcagcgt gggccgaccc aatagagtta ataaatttat gtactaatgc cttaggtaat       180
     cagttccaaa cacaacaagc tcgaactgtc gttcaacgac aattcagcga ggtgtggaaa       240
     ccgtcaccac aagtaactgt cagattccct gatagtgact ttaaagtgta taggtacaac       300
     gcagtattag accctctagt tactgcacta ttaggtgctt ttgatactag aaatagaata       360
     atagaagttg aaaatcaggc aaacccgacg actgccgaaa cgttagatgc tactcgtaga       420
     gtagatgacg cgacggtggc cataaggagc gcaataaata atttaatagt agaattgatc       480
     agaggaactg gatcatataa tcggagctct ttcgagagct cttctggttt ggtttggacc       540
     tctggtcctg caacttgagg tagtcaagtt gcttgataaa taacggattg tgtccgtaat       600
     cacacgtggt gcgtacgata acgcatagtg tttttccntc cttaaata                    648
//