ID   HQ541332; SV 1; linear; genomic RNA; STD; VRL; 2028 BP.
XX
AC   HQ541332;
XX
DT   17-JAN-2011 (Rel. 107, Created)
DT   13-DEC-2011 (Rel. 111, Last updated, Version 3)
XX
DE   Heterobasidion RNA virus 1 isolate HetRV1-an1 putative RNA-dependent RNA
DE   polymerase gene, complete cds.
XX
KW   .
XX
OS   Heterobasidion partitivirus 1
OC   Viruses; Riboviria; Partitiviridae; Alphapartitivirus.
XX
RN   [1]
RP   1-2028
RX   PUBMED; 22115442.
RA   Vainio E.J., Hakanpaa J., Dai Y.C., Hansen E., Korhonen K., Hantula J.;
RT   "Species of Heterobasidion host a diverse pool of partitiviruses with
RT   global distribution and interspecies transmission";
RL   Fungal Biol 115(12):1234-1243(2011).
XX
RN   [2]
RP   1-2028
RA   Vainio E.J.;
RT   ;
RL   Submitted (04-NOV-2010) to the INSDC.
RL   Forest Pathology, Finnish Forest Research Institute, Jokiniemenkuja 1 POB
RL   18, Vantaa 01301, Finland
XX
DR   MD5; d30b7254b12961d814b6b38d57ee321c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2028
FT                   /organism="Heterobasidion partitivirus 1"
FT                   /host="Heterobasidion annosum"
FT                   /isolate="HetRV1-an1"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /isolation_source="Pinus sylvestris"
FT                   /collected_by="P. Lakomy"
FT                   /collection_date="1994"
FT                   /db_xref="taxon:942041"
FT   CDS             97..1956
FT                   /codon_start=1
FT                   /product="putative RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:E7E1F7"
FT                   /db_xref="UniProtKB/TrEMBL:E7E1F7"
FT                   /protein_id="ADV15450.1"
FT                   /translation="MEYLTSLFSRVLNFSSTITNFKLVDHVDNGPSIPYINEIAVDNHK
FT                   RTLRQAFEMYLDSDEISFIIEGHKRTDLSPETITDDFFSGDIPDHPEPTDLKSQLAIEY
FT                   GLQCLVDAFRPPRPAKVTHLYDVQWHYPFKWQVNAEFPFSVVPYFLGLRKTFNDFYDHA
FT                   TRTWSKYVNPLDAQQRYGSDPSPDTLSQVTPPKFGFMKDLIFSFVHSWQHIIKSRFTSM
FT                   AGYSHSNYIRQRFLFPMLLHIKTAVVKFDAPNKLRTIWGVSKLWIISEAQIYWEYIAWI
FT                   KLNPGITPMLWGYETFTGGWYRLYSTLWQPNENVTYITIDWSRFDKRAFFWLIRKIFIR
FT                   TRSFFDFNNGYVSTRDYPHSPTNPDKLQALWEWTIEAFFDSPIVLPDGRMYKRLFAGIP
FT                   SGLFITQLMDSWYNYTMICSILYYMGYDPKSCIIKVQGDDSIIRLAVLIPQHEHDNFLS
FT                   QMQKVADHLFGAVISLEKSELRNHINGCEVLSYRHIDGLPYRNLLKMLAQFYHTKARDP
FT                   TPAITMAQAIGFAYAACGNDFRIHRLLQEIYDYYHKLGYTPNPAGMSLVFGNSPDRPDF
FT                   PLPFDHFPEQSEVQQYFLSLDYRNAEQDAKTWPMSHFLSAPCT"
XX
SQ   Sequence 2028 BP; 574 A; 615 C; 337 G; 502 T; 0 other;
     agataaactg acagaacagc tctcaaagcc cctctggccc tgaaaattaa agccaactcg        60
     ctgctctctg aatcaaatct accacaccca ctcaccatgg aataccttac aagtcttttc       120
     tcccgcgttc tgaatttttc ttcgaccatc acgaacttca agctcgttga ccatgtcgac       180
     aacggtccat cgatacccta tatcaatgaa attgccgttg ataatcacaa acgcactctc       240
     cgtcaagcat tcgaaatgta cctcgattct gatgaaatct cattcatcat cgaaggacac       300
     aagcgaactg atctcagccc ggaaaccatc accgatgact tcttctccgg tgacattccc       360
     gatcatcctg agcccactga cctcaaaagt cagctcgcaa tcgaatacgg tctgcaatgc       420
     ctcgtggacg ccttccgtcc ccctcgccct gccaaagtca cacatctata cgatgtacaa       480
     tggcactatc cgttcaaatg gcaagtaaac gctgaattcc cattctccgt tgtcccatac       540
     ttccttggac tccgcaagac cttcaacgac ttctacgacc acgctacccg cacctggtca       600
     aagtacgtca acccgctcga cgcccaacaa cgttacggtt ctgacccatc gccggacact       660
     ctgtcccaag tgacgccacc aaaatttgga ttcatgaaag atctcatctt ctcattcgtt       720
     cattcatggc aacacatcat caaatcgcga ttcacatcaa tggctggata ctcacattcc       780
     aactacatcc gtcaacgttt tctcttccct atgcttcttc acatcaagac agccgtagtc       840
     aaattcgatg ctcccaacaa gctccgcacc atctggggtg tttctaaact ctggataatc       900
     tccgaagccc aaatatactg ggaatacatc gcttggatca aactcaatcc tggcatcaca       960
     ccgatgctct ggggttacga aaccttcact ggaggctggt accgtctata ctcgacactc      1020
     tggcaaccaa atgaaaatgt aacctatatc acaattgact ggtcccgttt tgacaaacgt      1080
     gcctttttct ggttaatccg gaaaatcttc atccgcacac ggtccttctt cgatttcaac      1140
     aatggatacg tctctacccg cgactaccca catagcccca caaatcccga caagctccaa      1200
     gctctctggg aatggactat agaagccttt ttcgactcac cgatcgtcct acccgacggc      1260
     cgaatgtaca agcgactctt cgctggtatc ccttccggcc tattcatcac ccagttaatg      1320
     gactcatggt acaattacac catgatatgt tcaatactgt actacatggg ttacgatccc      1380
     aaatcgtgca tcatcaaagt gcaaggcgac gactcaatca ttcgtctcgc tgtacttatc      1440
     cctcaacatg agcatgataa ttttctctct caaatgcaga aagtagcaga ccaccttttc      1500
     ggtgctgtta tctctctcga gaaatcggaa ctacgcaacc acatcaatgg atgcgaagta      1560
     cttagctatc gtcacatcga cggcctaccg taccgcaacc tactcaagat gctcgcccag      1620
     ttctatcaca cgaaagcaag agacccgact cccgcaatca caatggcgca agccatcgga      1680
     ttcgcctacg cagcctgtgg caatgacttc cgtattcatc gactccttca agaaatctat      1740
     gactactatc acaagttagg ctacacaccc aaccctgcag gcatgagtct cgtattcgga      1800
     aacagccctg accggccaga tttcccgcta ccgtttgatc acttccctga acaaagcgaa      1860
     gttcaacagt acttcctgtc tctcgactac cgcaatgctg aacaagacgc caaaacttgg      1920
     cctatgtctc acttcctttc cgcaccatgc acgtagattg ttagctcttt ctttattttt      1980
     aaaaaacaaa acaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaattt                   2028
//