ID   HQ541328; SV 1; linear; genomic RNA; STD; VRL; 2029 BP.
XX
AC   HQ541328;
XX
DT   17-JAN-2011 (Rel. 107, Created)
DT   13-DEC-2011 (Rel. 111, Last updated, Version 3)
XX
DE   Heterobasidion RNA virus 1 isolate HetRV1-au1 putative RNA-dependent RNA
DE   polymerase gene, complete cds.
XX
KW   .
XX
OS   Heterobasidion partitivirus 1
OC   Viruses; Riboviria; Partitiviridae; Alphapartitivirus.
XX
RN   [1]
RP   1-2029
RX   PUBMED; 22115442.
RA   Vainio E.J., Hakanpaa J., Dai Y.C., Hansen E., Korhonen K., Hantula J.;
RT   "Species of Heterobasidion host a diverse pool of partitiviruses with
RT   global distribution and interspecies transmission";
RL   Fungal Biol 115(12):1234-1243(2011).
XX
RN   [2]
RP   1-2029
RA   Vainio E.J.;
RT   ;
RL   Submitted (04-NOV-2010) to the INSDC.
RL   Forest Pathology, Finnish Forest Research Institute, Jokiniemenkuja 1 POB
RL   18, Vantaa 01301, Finland
XX
DR   MD5; 997b568ec31e77e76b12d4c338248acd.
DR   EuropePMC; PMC6443826; 30972301.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2029
FT                   /organism="Heterobasidion partitivirus 1"
FT                   /host="Heterobasidion australe"
FT                   /isolate="HetRV1-au1"
FT                   /mol_type="genomic RNA"
FT                   /country="Bhutan"
FT                   /isolation_source="Pinus wallichiana"
FT                   /collected_by="T. Kirisits"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:942041"
FT   CDS             96..1955
FT                   /codon_start=1
FT                   /product="putative RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:E7E1F3"
FT                   /db_xref="UniProtKB/TrEMBL:E7E1F3"
FT                   /protein_id="ADV15446.1"
FT                   /translation="MEYLTSLFSRVLNVASQITNFKLVDTTEYGPSIPYINEVAVENHK
FT                   RTLRQAFEMYLDADEIHYIVNEHKRTDLAPETILNDFFSGDLPDHPEPQDLKSQTAIEY
FT                   GLQCMVDAFRPPRPAKVTHLYDVQWHYPFKWQVNAEFPFSVVPHFLGLRKTFNDFYDHL
FT                   THTWSKYVNPLDAQQRYGSDPSPDTLSQVVPPKFGFMKDLIFSFVHSWQHIIKSRFKST
FT                   AGYTHSNYIRQRFLFPMLLHIKTAVVKFDAPNKLRTIWGVSKLWIISEAQIYWEYIAWI
FT                   KLNPGITPMLWGYETFTGGWYRLYSTLWQPNENVTYITIDWSRFDKRAYFWLIRKIFIR
FT                   TRQFFDFNNGYVPTKDYPFSPTDPDKLQALWEWTIEAFFDSPIIVPDGRMFKRLFAGIP
FT                   SGLFITQLMDSWYNYTMLCSILYYMGIDPKSCIIKVQGDDSIIRLAILIPKDEHDIFLS
FT                   QMQEVADHLFGAIISLEKSELRNHINGCEVLSYRHIDGLPYRNLLKMLAQFYHTKARDP
FT                   TPAITMAQAIGFAYAACGNDFRIHSLLKEIHDYYKKLGYSPNPAGMSLVFGNSPDRPDF
FT                   PLPFDHFPEQSEVQQYFLSLDYRNAEQDAKTWPMSHFLSAPCT"
XX
SQ   Sequence 2029 BP; 589 A; 587 C; 335 G; 518 T; 0 other;
     agataaactg acagaacgac ctcagaaaat cctcagccct gaaaattaaa gctgatttgt        60
     cgcaatctga atcaaatcta ccacacccac tcaccatgga atacctaaca agtctatttt       120
     cccgcgttct caacgtcgct tctcaaatca cgaacttcaa gctcgtcgat actactgagt       180
     acggtccatc aattccgtat atcaatgaag ttgcagttga aaatcacaaa cgcacactcc       240
     gtcaagcatt cgaaatgtat ctcgatgccg atgagattca ctacatcgtc aacgaacaca       300
     agcgaacaga tctggccccc gagaccatcc tcaacgattt cttctccggc gatcttcctg       360
     atcatccaga acctcaagac ctcaaaagtc aaaccgctat cgaatacggt ctacaatgca       420
     tggttgacgc ctttcgtccc ccacgcccag ctaaagtcac acatctttac gatgttcaat       480
     ggcactaccc attcaaatgg caagtaaacg ctgaatttcc tttctcagtt gttccccatt       540
     tcctaggact acgcaagacc ttcaatgact tctacgacca tctaactcac acttggtcca       600
     agtacgtcaa cccgctcgac gctcaacaac gctacggatc cgacccgtca cctgatactc       660
     tatcacaagt tgtcccacca aaatttggat ttatgaaaga ccttatcttt tcgttcgtcc       720
     attcatggca acacatcatc aagtcacgct tcaaatcaac agctggatac acccactcca       780
     actacatccg tcaacgtttt ctcttcccca tgcttcttca catcaagact gctgtcgtaa       840
     aattcgacgc tcccaacaag ctccgcacca tctggggtgt ttctaaactc tggatcattt       900
     ccgaagctca aatttattgg gaatacatcg catggatcaa actcaatcct ggcatcactc       960
     cgatgctttg gggttacgaa acattcactg gaggctggta tcgattatat tcgacactct      1020
     ggcaaccaaa cgaaaatgta acctacatca cgattgactg gtcccgcttc gacaaacgtg      1080
     cttacttttg gctcatccga aagatattta tccgcacaag acagttcttc gactttaaca      1140
     atggttacgt ccccaccaag gactacccct ttagcccaac tgaccctgac aagctccaag      1200
     ctctctggga atggactatt gaagcattct tcgactcacc gatcatcgtt cccgacggcc      1260
     gcatgtttaa gcgacttttc gctggcatac cctcaggcct attcatcaca cagttaatgg      1320
     attcatggta caactacact atgttgtgct ccatccttta ctacatggga atcgatccta      1380
     aatcgtgcat catcaaagta caaggcgacg actcaatcat tcgtcttgct atactgatac      1440
     ccaaagatga gcatgatatt tttctctctc aaatgcaaga ggtagctgac caccttttcg      1500
     gcgctatcat ctctctcgag aaatcggaac tacgaaacca catcaatgga tgcgaagttc      1560
     ttagctatcg tcatatcgac ggcttacctt accgcaacct gcttaagatg ctcgctcagt      1620
     tctatcacac gaaggcaaga gacccgactc ccgctatcac aatggctcaa gccattggat      1680
     tcgcatacgc agcctgtggc aacgacttca gaatccactc tctcctcaag gagattcacg      1740
     attactacaa gaagttaggc tactctccaa accccgctgg tatgagtctc gtattcggaa      1800
     acagccctga ccggcctgat ttcccgctac cgtttgatca cttccctgaa caaagcgaag      1860
     ttcaacagta cttcctgtca ctcgactacc gtaacgcaga acaagacgcc aaaacctggc      1920
     ccatgtctca cttcctctct gccccttgca cgtagattgt ttgctcacat ttcttatttt      1980
     ttaaaaaaaa aaaaaaaaaa aaaagaaaaa aaaaaaaaaa aaaaaattc                  2029
//