ID   HQ316637; SV 1; linear; genomic RNA; STD; VRL; 2041 BP.
XX
AC   HQ316637;
XX
DT   28-OCT-2010 (Rel. 106, Created)
DT   28-OCT-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Alfalfa mosaic virus strain HZ segment RNA3, complete sequence.
XX
KW   .
XX
OS   Alfalfa mosaic virus
OC   Viruses; Riboviria; Bromoviridae; Alfamovirus.
XX
RN   [1]
RP   1-2041
RA   Jin L., Qin Z., Chen J.;
RT   "The complete sequence of Alfalfa mosaic virus isolate from China";
RL   Unpublished.
XX
RN   [2]
RP   1-2041
RA   Jin L., Qin Z., Chen J.;
RT   ;
RL   Submitted (27-SEP-2010) to the INSDC.
RL   Institute of Bioengineering, Zhejiang Sci-Tech University, Xiasha 2# Road,
RL   Hangzhou, Zhejiang 310018, China
XX
DR   MD5; 1d7606789f6327c4a8c848a2b2b0a1bc.
DR   RFAM; RF00252; Alfamo_CPB.
XX
CC   GenBank Accession Numbers HQ316635-HQ316637 represent the complete
CC   genome of Alfalfa mosaic virus strain HZ.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2041
FT                   /organism="Alfalfa mosaic virus"
FT                   /segment="RNA3"
FT                   /lab_host="Nicotiana glutinosa"
FT                   /strain="HZ"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Oct-2009"
FT                   /db_xref="taxon:12321"
FT   CDS             243..1145
FT                   /codon_start=1
FT                   /product="MP protein"
FT                   /db_xref="GOA:E3VWL7"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:E3VWL7"
FT                   /protein_id="ADO85717.1"
FT                   /translation="MENTKTNASSSGMSSSSSFSVSYAEEMLLADEVSKINSMSILGPN
FT                   QLKLCTQLVLSNGAAPVVLSLVSKERKSILNRMLPKIGQRMYVHHSAIYLLYMPNILKS
FT                   SSGSITLKLFNEATGELVDVDTDHDATQACIFAGRYPRSILAKDAAKGHDLKLVVHAVA
FT                   STNANSAVGVLYPIWEDELSRKQILERGADFLKFPIAETEPVRDLLNAGKLTDFVLDRT
FT                   RLGVGSKNDPSPVLLEPRAKITGKAKTVFIPEGPSVPNTTINGIAPTVRIDAGSPKGLG
FT                   VPKGFTYESFIKDEILPDH"
FT   CDS             1195..1851
FT                   /codon_start=1
FT                   /product="CP protein"
FT                   /db_xref="GOA:E3VWL8"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:E3VWL8"
FT                   /protein_id="ADO85718.1"
FT                   /translation="MSSSQKKAGGKAGKPTKRSQNYAALRKAQLPKPPALKVPVAKPTN
FT                   TILPQTGCVWQSLGTPLSLSSFNRLGVRFLYSFLKDFAGPRILEEDLIYRMVFSITPSH
FT                   AGTFCLTDDVTTEDGRAVAHGNPMQEFPQGAFHANEKFGFELVFTAPTHAGMQNQNFKH
FT                   SYAVALCLDFDAQPEGSKNPSYRFNEVWVERKAFPRAGPLRSLITVGLLDEADDL"
XX
SQ   Sequence 2041 BP; 546 A; 441 C; 460 G; 594 T; 0 other;
     gttttaatac catttttcaa aaatattcca attcaactca attagcgctt ttacagtgta        60
     attcgtactt ttcgtaagta agtttctgta aaagcgtttc ttgttttaat ttggtctaac       120
     acgtaattcg tactcttcgt gagtaagttg tgttagccat acctatcctt taaatttctg       180
     tcaatttaaa aagaaaatca ttcccattcg cgtaattcgt actcttcgtg agtaagttgc       240
     aaatggagaa tacaaaaaca aacgcctcga gttctggaat gtcttcttcc tctagctttt       300
     cagtgtctta tgctgaggaa atgttactag ctgatgaagt ttcgaagata aactcaatgt       360
     ctattctggg tcctaatcag ctaaagctct gcactcaact ggtgttgtct aatggagcag       420
     cgccagtagt tttaagcctt gtgtcaaagg aaaggaaatc gattttgaat cgtatgcttc       480
     ctaagattgg acagaggatg tacgtccatc actcggctat ttacctcctt tatatgccaa       540
     acatactgaa aagttcttca gggagcatca ccttgaagct ttttaatgag gctacaggag       600
     agttagtgga tgttgacacc gaccatgatg ccacccaggc atgtatattt gctggacgtt       660
     acccccggag tattctggcg aaagacgcgg cgaaaggaca cgacttaaaa ttagtcgtcc       720
     acgctgttgc ttcgaccaat gcaaactccg ctgtcggtgt tctatacccc atttgggaag       780
     atgagttaag cagaaagcag atcctcgaaa ggggtgccga tttcctaaag tttccaattg       840
     ctgagaccga accagtccgc gatctcttaa atgctgggaa attgacggac tttgttcttg       900
     ataggacaag gttaggcgtg ggatcaaaga atgatcccag tccggttctt ttagaaccaa       960
     gagctaagat taccgggaag gcaaagacag tttttattcc cgaaggtcct agtgttccta      1020
     ataccactat aaatggtatt gcaccaacgg tgcgtataga tgccggttct ccaaagggtc      1080
     ttggagttcc gaaagggttt acatatgaaa gttttattaa agatgaaata ttacctgatc      1140
     attgatcggt aatgggccgt ttttattttt aattttcttt caaatacttc caccatgagt      1200
     tcttcacaaa agaaagctgg tgggaaagct ggtaaaccta ctaaacgttc tcagaactat      1260
     gctgctttac gcaaagctca actgccgaag cctccggcgt tgaaagtccc ggttgcaaaa      1320
     ccgacgaata ctatactgcc acagacgggc tgcgtgtggc aaagcctcgg gacccctctg      1380
     agtctgagct cttttaatag gctcggcgtg agattccttt acagttttct gaaggatttc      1440
     gcaggacctc ggatcctcga agaggatctg atttacagga tggtgttttc tataacaccg      1500
     tcccatgccg gcaccttttg tctcactgat gacgtgacga ctgaggatgg tagggccgtt      1560
     gcgcatggta atcccatgca agaattccct caaggcgcgt ttcacgccaa tgagaagttc      1620
     gggtttgagt tggtcttcac agctcctacc catgcgggaa tgcaaaatca aaatttcaag      1680
     cattcctatg ccgtagccct ctgtctggac ttcgatgcgc agcctgaggg atctaaaaat      1740
     ccctcatacc gattcaacga agtttgggta gagagaaagg cgttcccgcg agcagggccc      1800
     ctccgcagtt tgattactgt ggggctgctc gacgaagctg acgatctttg atcgttattg      1860
     atgtacccca ttaatttggg atgctaaagt catttaatgc tgacctccac tgggtggatt      1920
     aaggtcaagg tatgaagtcc tattcgctcc tgataggaac gacttcatat tgcttatata      1980
     tgtgctgatg cacatatata aatgctcatg caaaactgca tgaatgcccc taagggatgc      2040
     t                                                                      2041
//