ID HQ316636; SV 1; linear; genomic RNA; STD; VRL; 2595 BP. XX AC HQ316636; XX DT 28-OCT-2010 (Rel. 106, Created) DT 28-OCT-2010 (Rel. 106, Last updated, Version 1) XX DE Alfalfa mosaic virus strain HZ segment RNA2, complete sequence. XX KW . XX OS Alfalfa mosaic virus OC Viruses; Riboviria; Bromoviridae; Alfamovirus. XX RN [1] RP 1-2595 RA Jin L., Qin Z., Chen J.; RT "The complete sequence of Alfalfa mosaic virus isolate from China"; RL Unpublished. XX RN [2] RP 1-2595 RA Jin L., Qin Z., Chen J.; RT ; RL Submitted (27-SEP-2010) to the INSDC. RL Institute of Bioengineering, Zhejiang Sci-Tech University, Xiasha 2# Road, RL Hangzhou, Zhejiang 310018, China XX DR MD5; 116846b8ffd1ac37f3152528d2f5e82d. DR RFAM; RF00252; Alfamo_CPB. XX CC GenBank Accession Numbers HQ316635-HQ316637 represent the complete CC genome of Alfalfa mosaic virus strain HZ. XX FH Key Location/Qualifiers FH FT source 1..2595 FT /organism="Alfalfa mosaic virus" FT /segment="RNA2" FT /lab_host="Nicotiana glutinosa" FT /strain="HZ" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Oct-2009" FT /db_xref="taxon:12321" FT CDS 56..2428 FT /codon_start=1 FT /product="P2 protein" FT /db_xref="GOA:E3VWL6" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:E3VWL6" FT /protein_id="ADO85716.1" FT /translation="MFTLLRCLGFGISEPTNTSSSEYVPESSVEEISNEVAELDSVDPS FT FQCYKHVFVSLMLVRKMTQAAEDFHENFGGEFDSPCCRVYRLYRHFVNEDDAPAWAIPN FT VVNEDSYDDYAYLREELDAIDSSFELLNEERELSEFTDRLNALRFFPVSKTEALPVANV FT QEVKLISENIPVIDDLYYYSDENIPSEMPAPLLDELGMLPEELGPLNEIEDIKPVAAPI FT VLLSEFKASDNAKPLDIVEIIPDVSLTKPYEAVISGNDWMTLGRMIPTTPVPTIRDVFF FT SGLSRHGSPEVIQNALDEFLPLHHSIDDKYFQEWVETSDKFLDVDPCRIDLSVFNNWQS FT SENCYEPRFKTGALSTRKGTQTEALLAIKKRNMNVPNLGQIYDVNSVANSVANKLLTTV FT IDPDKLCMFPDFISEGEVSYFQDYIVGKNPDPELYSDPLGVRSIDSYKHMIKSVLKPVE FT DNSLHLERPMPATITYHDKDIVMSSSPIFLAAAARLMLVLGDKITIPSGKFHQLFSIDA FT EAFDASFHFKEIDFSKFDKSQNELHHLIQERFLKYLGIPNEFLTLWFNAHRKSRISDSK FT NGVFFNVDFQRRTGDALTYLGNTIVTLACLCHVHDLMDPNVKFVVASGDDSLIGTVEEL FT PRDQEFLFTTLFNLEAKFPHNQPFICSKFLITMPTISGGKVVLPVPNPLKLLIRLGSKK FT VNADIFDEWYQSWIDIIGVFNDHHVIRCVAAMTAHRYLRRPSLYLEAALESLGKIFASK FT TLCKECLFNEKHESNVKIKPRRVKKSHSDARSRARRA" XX SQ Sequence 2595 BP; 741 A; 532 C; 543 G; 779 T; 0 other; gtttttatct tttcgcgatt gaaaagataa gttttttcag tttaatcttt tcaatatgtt 60 cactcttttg agatgtctcg gttttggtat tagtgaacct actaatactt cctcatcaga 120 gtacgttccc gagagttccg ttgaagagat ttccaacgaa gtcgctgaac ttgattcagt 180 ggatccatca ttccaatgtt acaaacatgt ttttgtatca ttgatgctcg taagaaagat 240 gactcaagct gccgaagact tccacgagaa ttttggggga gaattcgata gcccttgttg 300 tagggtttac cgtctttata gacattttgt taatgaagac gatgcacccg cttgggccat 360 accgaatgtc gtgaatgaag attcttacga cgattatgcc tacctccgag aggagttaga 420 tgccatagac agctcttttg agttgctaaa cgaagagcgt gagttatcgg aatttacgga 480 cagactcaac gctttaagat tttttcctgt ttccaaaaca gaagcgctac cagtggcgaa 540 tgtccaagag gtcaaactca tttctgagaa cataccagtc attgatgacc tttattacta 600 ctctgacgag aatattccgt ctgaaatgcc cgcaccatta ctggatgagt tggggatgtt 660 accggaggaa cttggacctc tgaatgaaat cgaagacatt aagccggtgg cggctccaat 720 cgtattacta tctgagttta aagcctcaga taatgctaag ccactcgaca tagtcgaaat 780 cattccagac gtgagtctga cgaaacctta tgaagccgtc atatcaggta atgattggat 840 gacgttgggg aggatgatac ctaccactcc cgttcctacc ataagggatg tcttcttctc 900 tggcctttct cggcatggat cgccggaagt gatccagaat gctcttgatg aatttcttcc 960 gctccatcat tcaattgatg ataagtattt tcaagaatgg gttgaaacct cagataaatt 1020 tctcgatgtc gatccatgtc gaatcgatct gagtgttttc aacaactggc agtcttcgga 1080 aaactgctat gaacctcggt ttaaaaccgg tgcattatcc acacgtaagg gcactcaaac 1140 tgaagcccta ttagcgataa agaaacgtaa tatgaatgtg cctaacctgg ggcaaattta 1200 tgacgtgaat tctgttgcta attccgtggc taataagctc ttaacaactg ttatagatcc 1260 tgataagcta tgcatgtttc cagattttat atctgagggt gaagtttcgt atttccagga 1320 ctatatagtt ggaaagaatc ccgaccctga attatattca gatcctctag gcgttcgttc 1380 catcgacagc tataaacaca tgattaaatc cgtgttaaag cccgttgaag ataattctct 1440 gcacctagaa cggccgatgc cagcaaccat aacgtaccat gataaagata tcgtgatgtc 1500 atcttcacca atttttttgg ctgctgctgc ccgcttgatg ttagtcttag gagataagat 1560 aactatacca agcggaaaat tccatcaatt gttttccatc gatgctgaag cctttgatgc 1620 aagtttccat tttaaagaga tagacttttc gaagttcgac aaaagtcaaa atgagttgca 1680 tcacttgatc caagaaaggt ttctgaaata cttaggtata cccaacgaat ttctaacctt 1740 atggtttaat gcgcatagaa aatcccgaat ctcagattcg aagaatggcg ttttctttaa 1800 cgtcgatttc caacgtcgta ctggagatgc gctcacatac ttgggaaaca caatagtgac 1860 attagcttgt ctatgtcatg tgcatgactt gatggaccca aatgtgaaat tcgttgtcgc 1920 ttccggtgat gattcattga taggtactgt ggaggaatta ccaagagatc aagagtttct 1980 tttcacgact ctttttaatc ttgaagcaaa gtttcctcat aaccagcctt tcatatgcag 2040 taagtttttg attactatgc ccactataag tggaggcaaa gttgttctgc cagtaccgaa 2100 tccattgaaa ctcctcatac gcttgggttc gaagaaagtc aatgccgata tattcgatga 2160 atggtatcaa tcttggattg atataattgg cgtttttaac gaccaccatg tcatccgatg 2220 cgttgccgcg atgacagcac ataggtatct cagaagaccg agtttatacc tagaagccgc 2280 tttagaatcc ctaggtaaga tcttcgctag taagaccttg tgtaaggaat gcctctttaa 2340 tgagaagcac gagtctaatg taaaaattaa gcctcgtaga gtgaaaaaat cccactcgga 2400 tgccaggtca agggcacgcc gagcttgatg ttttcttgac ataagtcaaa ttgccaacct 2460 ccactgggtg ggttaaggtt gaggtataga atcctattcg ctcctgatag gagaaattct 2520 atattgctta tatatgtgct tatgcacata tataaatgct cacgcaaaac tgcatgaatg 2580 cccctaaggg atgca 2595 //