ID   HQ184436; SV 1; circular; genomic DNA; STD; VRL; 2640 BP.
XX
AC   HQ184436;
XX
DT   22-FEB-2011 (Rel. 107, Created)
DT   22-FEB-2011 (Rel. 107, Last updated, Version 1)
XX
DE   Squash leaf curl virus isolate IL segment DNA-A, complete sequence.
XX
KW   .
XX
OS   Squash leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2640
RA   Abudy A., Sufrin-Ringwald T., Dayan-Glick C., Guenoune-Gelbart D.,
RA   Livneh O., Zaccai M., Lapidot M.;
RT   "Watermelon chlorotic stunt and Squash leaf curl begomoviruses - new
RT   threats to cucurbit crops in the Middle East";
RL   Isr. J. Plant Sci. 58(1):33-42(2010).
XX
RN   [2]
RP   1-2640
RA   Lapidot M., Sufrin-Ringwald T.;
RT   ;
RL   Submitted (25-AUG-2010) to the INSDC.
RL   Plant Sciences, Volcani Center, ARO, P.O.Box 6, Bet Dagan 50250, Israel
XX
DR   MD5; 21b5087b9f369f551aa823cb9051efe4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2640
FT                   /organism="Squash leaf curl virus"
FT                   /segment="DNA-A"
FT                   /host="squash"
FT                   /isolate="IL"
FT                   /mol_type="genomic DNA"
FT                   /country="Israel"
FT                   /collection_date="Aug-2003"
FT                   /db_xref="taxon:10829"
FT   CDS             213..968
FT                   /codon_start=1
FT                   /product="AV1"
FT                   /db_xref="GOA:D9J2U9"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:D9J2U9"
FT                   /protein_id="ADX96020.1"
FT                   /translation="MVKRDAPWRLMAGTSKVSRSANFSPRGGMGPRFNKAAAWVNRPMY
FT                   RKPRIYRTMRGPDIPKGCEGPCKVQSYEQRHDISHLGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATI
FT                   KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAAKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
FT   CDS             complement(965..1504)
FT                   /codon_start=1
FT                   /product="AC2"
FT                   /db_xref="GOA:F1C385"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:F1C385"
FT                   /protein_id="ADX96022.1"
FT                   /translation="MPNSSSSKVPSIKAQHRIAKKRAVRRRRIDLDCGCSIYIHINAPK
FT                   MVMDLRTWDDITVHQAENSVFIWEVPNPLYFKMYNVEDPLYTHTRIYHIHIRFNHNLRR
FT                   ALNLHKAFLNFQVWTESIRASGTTYLNRFRHLVMLYLDRLGVICLNNVIRAVSWATDRS
FT                   YVNYVLENHEIKFKIY"
FT   CDS             complement(965..1369)
FT                   /codon_start=1
FT                   /product="AC3"
FT                   /db_xref="GOA:F1C386"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:F1C386"
FT                   /protein_id="ADX96023.1"
FT                   /translation="MVMDLRTWDDITVHQAENSVFIWEVPNPLYFKMYNVEDPLYTHTR
FT                   IYHIHIRFNHNLRRALNLHKAFLNFQVWTESIRASGTTYLNRFRHLVMLYLDRLGVICL
FT                   NNVIRAVSWATDRSYVNYVLENHEIKFKIY"
FT   CDS             complement(1446..2495)
FT                   /codon_start=1
FT                   /product="AC1"
FT                   /db_xref="GOA:F1C387"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:F1C387"
FT                   /protein_id="ADX96021.1"
FT                   /translation="MPRNPNSFRLTARNIFLTYPRCDVPKEEVLEMLLHLSWSVVKPNY
FT                   IRVAREEHSDGSPHLHCLIQLSGKSNIKDAGLFFDLTHPRRSARFHPNIQAAKDTNAVK
FT                   NYITKEGDYCESGQYKVSGGSKSNKDDVYHNAVNAGSAGEALEIIKAGDPKTFIVNYHN
FT                   LLANVERLFQKPPEPWVPPFEISSFTSVPDELQDWADDYFNECSAARPRPTSIIIEGGS
FT                   RTGKTMWARSLGPHNYLSGHLDFNSRVFSNDVKYNVIDDVAPHYLKLKHWKELIGAQRD
FT                   WQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKDFLDKAENSALREWTEKNAKFIFLEGP
FT                   LYQSTAQDC"
FT   CDS             complement(2084..2428)
FT                   /codon_start=1
FT                   /product="AC4"
FT                   /db_xref="UniProtKB/TrEMBL:F1C388"
FT                   /protein_id="ADX96024.1"
FT                   /translation="MFPKKKFLRCFCISRGQSSNRITLESPERNIPTGLRTYTASFNYL
FT                   ENPTSRMLDYFSTSLTPDGLPDFTRTFRLPKTPTPSRTTSPKKVIIVNPGNIKCLGVQS
FT                   RTKTTYITTP"
XX
SQ   Sequence 2640 BP; 707 A; 584 C; 594 G; 755 T; 0 other;
     accggatggc cgcccgtttt tggtgtcctc tactttagcc cacggggcag gcccaggccc        60
     aaatcaacca caaccttttt ttattttatg ggaccacttt aattattcca accaaccacg       120
     ttccgcctga cgagtctaca taataatgac ttggtgacta agtgtggtcc ctataaataa       180
     agctgacata tcccatacct ctttaattca aaatggtaaa gagagatgcc ccatggcgtt       240
     taatggcggg gacctcaaag gtctcacgct ctgctaactt ttcgcctcgt ggaggtatgg       300
     gcccaagatt caacaaggcc gctgcatggg ttaacaggcc catgtacagg aagcccagga       360
     tctatcgcac aatgagaggc ccagacatcc ccaagggatg tgaagggcca tgcaaggttc       420
     agtcttacga gcagcggcat gatatctccc atcttggcaa ggtaatgtgt atttcggacg       480
     tgacgcgtgg taatggcatt actcaccgcg tcggcaagcg cttttgtgtt aagtctgtat       540
     atattttagg caagatatgg atggacgaaa atatcaagtt gaagaatcac acgaacagtg       600
     tgatgttttg gttagttcga gatcgtagac catatggcac tccgatggat ttcggccagg       660
     tgttcaacat gtttgacaac gagcccagca cggcaactat caagaacgat ctacgtgatc       720
     gttatcaagt catgcacagg ttctacgcga aggtcactgg tggtcagtat gctagcaacg       780
     aacaagcctt ggttaggcgt ttctggaagg tcaacaacca tgttgtgtat aatcaccagg       840
     aagccgcgaa atacgagaat catacggaga acgctctgtt attgtatatg gcatgtactc       900
     atgcctctaa ccctgtatat gcgacattga aaattcggat ctatttttat gattcgataa       960
     caaattaata aattttgaat tttatttcat gattctcgag tacataattt acatatgaac      1020
     ggtctgttgc ccaagataca gctcgtataa cgttattgag acaaataact cctaacctat      1080
     ctaagtacaa cataactaag tgcctaaatc tattcaaata tgtcgtccca gaagctcgaa      1140
     tcgattccgt ccagacttgg aagttcagga acgctttgtg aagatttagt gctctcctca      1200
     ggttgtggtt gaaccggata tgaatgtggt atatccttgt gtgcgtgtag agtggatcct      1260
     ccacgttgta catcttgaaa tagaggggat ttggaacctc ccaaataaaa acggaattct      1320
     ctgcctgatg cacagtgatg tcgtcccatg tgcgtaaatc cattaccatc tttggcgcat      1380
     ttatatgtat gtatatggaa cagccacagt ctaagtcgat tcttcgacga cgaacagctc      1440
     tttttttagc aatcctgtgc tgtgctttga tagaggggac cttcgaggaa gatgaatttg      1500
     gcattttttt cagtccactc tcgtagtgcc gagttctcgg ctttgtcgag gaaatcttta      1560
     taactggacc cctctccagg attgcacagc acgattgatg ggattccacc tttaatttga      1620
     accggctttc catatttaca gttggactgc cagtcccttt gggccccaat caattccttc      1680
     cagtgcttta gctttaggta atgcggagcg acgtcatcaa tgacgttata cttgacgtca      1740
     tttgagaaaa ccctagaatt gaaatcaaga tggccgctca agtaattatg tgggcctaat      1800
     gacctagccc acattgtctt gcccgttctt gaaccacctt ctatgattat actagttggc      1860
     cttggccgcg cagcggaaca ctcattaaaa taatcatcag cccaatcttg taactcatct      1920
     ggaactgacg tgaacgaaga gatctcaaac ggaggaaccc atggttccgg aggtttctga      1980
     aataatctct cgacgttagc taataaatta tgataattaa cgataaacgt ctttggatca      2040
     ccagctttta taatttcgag agcttctccc gcactacctg catttacggc gttgtgatat      2100
     acgtcgtctt tgttcgactt tgaaccccca gacactttat attgcccgga ttcacaataa      2160
     tcaccttctt tggtgatgta gttcttgacg gcgttggtgt ctttggcagc ctgaatgttc      2220
     gggtgaaatc gggcagaccg tctggggtga gtgaggtcga aaaataatcc agcatccttg      2280
     atgttggatt ttccagataa ttgaatgagg cagtgtaagt gcggagaccc gtcggaatgt      2340
     tcctctctgg cgactctaat gtaattcggt ttgacgactg accacgagag atgcagaagc      2400
     atctcaagaa cttcttcttt gggaacatcg caccttggat aagttaagaa tatatttctg      2460
     gcagttaaac gaaaggaatt agggtttcgt ggcatatttc gtaaatatgg atcgggacac      2520
     caggaggtgt cctctcaact ttctcatatt gctggtgtcc tggtgtccta tatatacctc      2580
     aagacacata aagcctctag gggacaccaa ggggcaaaat cggccatccg caataatatt      2640
//