ID   HM989938; SV 1; linear; genomic RNA; STD; VRL; 1118 BP.
XX
AC   HM989938;
XX
DT   15-MAR-2011 (Rel. 108, Created)
DT   28-JUN-2011 (Rel. 109, Last updated, Version 2)
XX
DE   Scophthalmus maximus reovirus segment S9, complete sequence.
XX
KW   .
XX
OS   Scophthalmus maximus reovirus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-1118
RX   DOI; 10.1186/1471-2164-12-323.
RX   PUBMED; 21689389.
RA   Ke F., He L.B., Pei C., Zhang Q.Y.;
RT   "Turbot reovirus (SMReV) genome encoding a FAST protein with a non-AUG
RT   start site";
RL   BMC Genomics 12(1):323-323(2011).
XX
RN   [2]
RP   1-1118
RA   Ke F., He L.B., Pei C., Zhang Q.Y.;
RT   ;
RL   Submitted (26-JUL-2010) to the INSDC.
RL   State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of
RL   Hydrobiology, Chinese Academy of sciences, Donghu South Road #7, Wuhan,
RL   Hubei 430072, China
XX
DR   MD5; c4d6f858d58790ee9e03758e37f153db.
XX
CC   GenBank Accession Numbers HM989930-HM989940 represent the complete
CC   genome of Scophthalmus maximus reovirus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1118
FT                   /organism="Scophthalmus maximus reovirus"
FT                   /segment="S9"
FT                   /host="Scophthalmus maximus (turbot)"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Jun-2007"
FT                   /note="acronym: SMReV"
FT                   /db_xref="taxon:994485"
FT   CDS             26..1078
FT                   /codon_start=1
FT                   /product="NS38"
FT                   /note="nonstructural protein; involved in the formation of
FT                   viral inclusion bodies with NS88"
FT                   /db_xref="UniProtKB/TrEMBL:F2WJL5"
FT                   /protein_id="ADZ31985.1"
FT                   /translation="MATPSAKLITQENTERVTRLLENYPTLSLTLRQDTSNRGAIESNY
FT                   SASGPAGSLRLLNPIAVNKNPHQPGYSRPDPEATRPPPLRTLINAGLDAALQHGSQCPV
FT                   DQALRVFIEKACPHWHAEVLPNDWTRVCPLTLASRISLAAAGFDPNTLDLQAPSSTSMV
FT                   IAYTSKVLGLCADLANSSLGYFQTSAADAIRNPDSLAVVITQYGYETKGFQRQDAPTCI
FT                   SPNDLDPKYDIAWLSAIVILIAYQLELDLTAASLSTTDVNSMSTHSTAVETLMFKMKWL
FT                   APFSSRIMHLCAANAANPFRSFSEMFLMWQKPTKYVLPNITMKLSGRFLEVIADGSELF
FT                   SVSSSRVGGN"
XX
SQ   Sequence 1118 BP; 236 A; 382 C; 247 G; 253 T; 0 other;
     gttttagaga tcacccggag tagacatggc aaccccatca gctaaactca tcacccaaga        60
     gaacaccgag cgtgttacac gcttgctcga gaactatccg acattaagtc tgaccctccg       120
     acaggacacc tccaaccgtg gagcgattga atccaactac agtgcctctg gtcccgctgg       180
     ttccctgaga ctcctgaacc ccatcgctgt gaacaagaac ccacatcagc ctggctactc       240
     tcgccctgac cccgaggcta cacgccctcc ccccctgcgc accctgatca acgctggcct       300
     tgatgctgct ctgcaacatg gctctcagtg cccagtggac caagctctgc gtgtattcat       360
     cgagaaggcc tgccctcatt ggcacgctga ggtacttccc aatgactgga ctcgtgtctg       420
     ccccctgact ctggcgtctc gcatcagtct tgctgcagcc gggttcgacc ccaacactct       480
     tgacctccag gcgccatcat ccacatcaat ggtcatcgcc tacacctcca aggtgcttgg       540
     cctatgtgcc gatctggcca actcatccct cggatacttc cagacatccg ctgctgatgc       600
     tatccgcaac cccgactcac tcgccgtcgt catcactcag tatggttacg agacaaaagg       660
     tttccagcga caggatgccc ccacctgcat ctcccctaac gacctggacc ctaagtacga       720
     catcgcctgg ctgtctgcca tcgtgatcct gatcgcctac cagctggagc tcgacctgac       780
     tgcagcatca ctgtccacca ctgacgtgaa ttccatgtcc actcacagta ccgctgtcga       840
     gactctcatg ttcaagatga agtggctagc ccccttctcc tccaggatca tgcatctctg       900
     cgccgctaat gcggctaacc cattccgcag cttcagcgag atgttcttga tgtggcagaa       960
     acccacgaag tatgtgcttc ccaacatcac catgaaactg tcaggcaggt tcctggaggt      1020
     tatcgctgat ggctccgagt tgttcagtgt ctccagctcg cgggtgggag gtaactaggc      1080
     acggccatag gcctactgcc tcattctctt tattcatc                              1118
//